mRNA_A-nodosum_M_contig1043.2.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig1043.2.1 vs. uniprot
Match: O82433_FUCDI (Vanadium bromoperoxidase n=1 Tax=Fucus distichus TaxID=3012 RepID=O82433_FUCDI) HSP 1 Score: 207 bits (527), Expect = 2.010e-61 Identity = 97/103 (94.17%), Postives = 101/103 (98.06%), Query Frame = 1
Query: 1 VGSPTHPSYPSGHATQNGAFATVLKALIGLERGGECFPNPVFPDDDGLELIAFEGSCLTYEGEINKLAVNVAFGRQMLGIHYRFDGIQGLILGETITIRTLHQ 309
VGSPTHPSYPSGHATQNGAFATVLKALIGL+RGGECFPNPVFP DDGLELI FEG+CLTYEGEINKLAVNVAFGRQMLGIHYRFDGIQGL+LGETIT+RTLHQ
Sbjct: 525 VGSPTHPSYPSGHATQNGAFATVLKALIGLDRGGECFPNPVFPSDDGLELINFEGACLTYEGEINKLAVNVAFGRQMLGIHYRFDGIQGLLLGETITVRTLHQ 627
BLAST of mRNA_A-nodosum_M_contig1043.2.1 vs. uniprot
Match: PRXV_ASCNO (Vanadium-dependent bromoperoxidase n=1 Tax=Ascophyllum nodosum TaxID=52969 RepID=PRXV_ASCNO) HSP 1 Score: 198 bits (504), Expect = 6.310e-59 Identity = 91/102 (89.22%), Postives = 100/102 (98.04%), Query Frame = 1
Query: 4 GSPTHPSYPSGHATQNGAFATVLKALIGLERGGECFPNPVFPDDDGLELIAFEGSCLTYEGEINKLAVNVAFGRQMLGIHYRFDGIQGLILGETITIRTLHQ 309
GSPTHPSYPSGHATQNGAFATVLKALIGL+RGG+C+P+PV+PDDDGL+LI F GSCLT+EGEINKLAVNVAFGRQMLGIHYRFDGIQGL+LGETIT+RTLHQ
Sbjct: 407 GSPTHPSYPSGHATQNGAFATVLKALIGLDRGGDCYPDPVYPDDDGLKLIDFRGSCLTFEGEINKLAVNVAFGRQMLGIHYRFDGIQGLLLGETITVRTLHQ 508
BLAST of mRNA_A-nodosum_M_contig1043.2.1 vs. uniprot
Match: B7ZGM6_9PHAE (Putative vanadium-dependent iodoperoxidase 3 n=1 Tax=Laminaria digitata TaxID=80365 RepID=B7ZGM6_9PHAE) HSP 1 Score: 159 bits (403), Expect = 6.770e-44 Identity = 73/102 (71.57%), Postives = 84/102 (82.35%), Query Frame = 1
Query: 4 GSPTHPSYPSGHATQNGAFATVLKALIGLERGGECFPNPVFPDDDGLELIAFEGSCLTYEGEINKLAVNVAFGRQMLGIHYRFDGIQGLILGETITIRTLHQ 309
GSPTHPSYP+GHATQNGAFATVLKAL+GLERG +CF +P PDD+GL L+ F G CLT+EGEINKLAVNVAFGR M G+H+R D QGL+LGE +R L Q
Sbjct: 465 GSPTHPSYPAGHATQNGAFATVLKALVGLERGSDCFRDPKVPDDEGLTLLDFTGDCLTFEGEINKLAVNVAFGRNMCGVHWRIDSEQGLLLGEMAAVRILQQ 566
BLAST of mRNA_A-nodosum_M_contig1043.2.1 vs. uniprot
Match: Q4LDE6_9PHAE (Vanadium-dependent iodoperoxidase 1 n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q4LDE6_9PHAE) HSP 1 Score: 156 bits (394), Expect = 1.450e-42 Identity = 74/106 (69.81%), Postives = 86/106 (81.13%), Query Frame = 1
Query: 4 GSPTHPSYPSGHATQNGAFATVLKALIGLERGGECFPNPVFPDDDGLELIAFEG----SCLTYEGEINKLAVNVAFGRQMLGIHYRFDGIQGLILGETITIRTLHQ 309
GSPTHPSYP+GHATQNGAFATVLKAL+GLERG CF +PVFPDD+GL L+ + G +CLT+EGEINKLAVNVA GR MLG+H+R D GL+LGET +R L Q
Sbjct: 472 GSPTHPSYPAGHATQNGAFATVLKALVGLERGSVCFNDPVFPDDEGLTLLPYTGDDGNNCLTFEGEINKLAVNVALGRNMLGVHWRIDSELGLLLGETAAVRILQQ 577
BLAST of mRNA_A-nodosum_M_contig1043.2.1 vs. uniprot
Match: A0A3G3BM28_SACJA (Vanadium-dependent iodine peroxidase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A3G3BM28_SACJA) HSP 1 Score: 150 bits (379), Expect = 2.370e-40 Identity = 69/102 (67.65%), Postives = 83/102 (81.37%), Query Frame = 1
Query: 4 GSPTHPSYPSGHATQNGAFATVLKALIGLERGGECFPNPVFPDDDGLELIAFEGSCLTYEGEINKLAVNVAFGRQMLGIHYRFDGIQGLILGETITIRTLHQ 309
GSPTHPSYPSGHA QNGAF+T+LKAL+GLERG ECF +PV P DDGL L+ F+G CLT+EGEINK A NVA GR +G+H+R D +GL+LGET+ +R L Q
Sbjct: 454 GSPTHPSYPSGHAVQNGAFSTILKALVGLERGLECFNDPVVPSDDGLTLLPFDG-CLTFEGEINKYAANVALGRNWMGVHWRMDAQEGLLLGETVAVRILMQ 554
BLAST of mRNA_A-nodosum_M_contig1043.2.1 vs. uniprot
Match: Q7X9V0_9PHAE (Vanadium-dependent bromoperoxidase 2 n=2 Tax=Laminaria digitata TaxID=80365 RepID=Q7X9V0_9PHAE) HSP 1 Score: 121 bits (303), Expect = 8.840e-30 Identity = 57/119 (47.90%), Postives = 76/119 (63.87%), Query Frame = 1
Query: 4 GSPTHPSYPSGHATQNGAFATVLKALIGLERGGECFPNPVFPDDDGLELIAFE-------GSC----------LTYEGEINKLAVNVAFGRQMLGIHYRFDGIQGLILGETITIRTLHQ 309
GSPTHP+YPSGHA NGA+ T LKA +G E G +CFPNPV +D+G + I ++ G C LTYEGE+NK++ NV GR +G+H+R DG+ G ++GET +R L Q
Sbjct: 475 GSPTHPAYPSGHAINNGAYITALKAFLGYEAGQKCFPNPVVSNDEGTKRIKYKPSGREIVGECVNEKGKLVEGLTYEGELNKISANVLLGRSHIGVHWRMDGVYGALMGETSCVRRLQQ 593
BLAST of mRNA_A-nodosum_M_contig1043.2.1 vs. uniprot
Match: A0A4Y7RBA7_9FIRM (PAP2 superfamily protein n=2 Tax=Pelotomaculum TaxID=191373 RepID=A0A4Y7RBA7_9FIRM) HSP 1 Score: 110 bits (276), Expect = 3.580e-26 Identity = 57/104 (54.81%), Postives = 67/104 (64.42%), Query Frame = 1
Query: 4 GSPTHPSYPSGHATQNGAFATVLKALIGLERGGECFPNPVFPDDDGLELIAFEGSCLTYEGEINKLAVNVAFGRQMLGIHYRFDGIQGLILGETITIRTLHQVR 315
G PTHP+YPSGHAT GA T+LKA + PNPV DGL L+ +EG LT GE+NKLAVN+A GR GIH+R DG +GL LGET+ IR L R
Sbjct: 465 GCPTHPAYPSGHATYIGAGVTMLKAFF---KESFVLPNPVVAGPDGLSLLPYEGPPLTVGGELNKLAVNIAMGRDFAGIHWRTDGSEGLKLGETVAIRILQDYR 565
BLAST of mRNA_A-nodosum_M_contig1043.2.1 vs. uniprot
Match: A0A5C7QWN2_9GAMM (Phosphatase PAP2 family protein (Fragment) n=1 Tax=Thiothrix sp. TaxID=1032 RepID=A0A5C7QWN2_9GAMM) HSP 1 Score: 106 bits (265), Expect = 1.200e-25 Identity = 56/107 (52.34%), Postives = 68/107 (63.55%), Query Frame = 1
Query: 4 GSPTHPSYPSGHATQNGAFATVLKALIGLERGGECFP--NPVFPDDDGLELIAFEGSCLTYEGEINKLAVNVAFGRQMLGIHYRFDGIQGLILGETITIRTLHQVRI 318
GSPTHPSYPSGHAT GA ATVLKA E F N V DDGL L+ + + LT GEINKLA N+A GR G+HYR D IQGL++GE + + L + ++
Sbjct: 195 GSPTHPSYPSGHATIAGACATVLKAFF-----NESFVLNNSVIASDDGLSLLPYNSNALTVGGEINKLAGNIALGRDYAGVHYRQDAIQGLLVGEKVALNLLSEAKL 296
BLAST of mRNA_A-nodosum_M_contig1043.2.1 vs. uniprot
Match: S4XN83_SORCE (Uncharacterized protein n=4 Tax=Sorangium cellulosum TaxID=56 RepID=S4XN83_SORCE) HSP 1 Score: 108 bits (269), Expect = 2.700e-25 Identity = 55/104 (52.88%), Postives = 66/104 (63.46%), Query Frame = 1
Query: 4 GSPTHPSYPSGHATQNGAFATVLKALIGLERGGECF--PNPVFPDDDGLELIAFEGSCLTYEGEINKLAVNVAFGRQMLGIHYRFDGIQGLILGETITIRTLHQ 309
G PTHPSYP+ HATQ GA TVLKA E F PNPV DDGL L+ + G LT GE+NKLA N+A GR G+HYR DG+ G++LGE I + L +
Sbjct: 404 GCPTHPSYPAAHATQAGACVTVLKAFF-----NESFVIPNPVVASDDGLSLVPYTGPALTVGGELNKLATNIAHGRDGGGVHYRSDGVAGMLLGEAIALSILSE 502
BLAST of mRNA_A-nodosum_M_contig1043.2.1 vs. uniprot
Match: A0A1V5BZB2_9FIRM (PAP2 superfamily protein n=3 Tax=Pelotomaculum TaxID=191373 RepID=A0A1V5BZB2_9FIRM) HSP 1 Score: 107 bits (268), Expect = 3.530e-25 Identity = 54/104 (51.92%), Postives = 66/104 (63.46%), Query Frame = 1
Query: 4 GSPTHPSYPSGHATQNGAFATVLKALIGLERGGECFPNPVFPDDDGLELIAFEGSCLTYEGEINKLAVNVAFGRQMLGIHYRFDGIQGLILGETITIRTLHQVR 315
GSPTHP+YPSGHAT GA T+LKA + PNPV DGL+L+ + G LT GE+NKLA N+A GR GIH+R DGI+G+ LGE + I L R
Sbjct: 395 GSPTHPAYPSGHATYTGAGVTMLKAFF---KESFIIPNPVVASADGLKLLPYSGPPLTVGGELNKLAANIALGRDFAGIHWRTDGIEGIKLGEAVAIGILQDYR 495 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1043.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1043.2.1 >prot_A-nodosum_M_contig1043.2.1 ID=prot_A-nodosum_M_contig1043.2.1|Name=mRNA_A-nodosum_M_contig1043.2.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=107bp VGSPTHPSYPSGHATQNGAFATVLKALIGLERGGECFPNPVFPDDDGLELback to top mRNA from alignment at A-nodosum_M_contig1043:17046..18393+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig1043.2.1 ID=mRNA_A-nodosum_M_contig1043.2.1|Name=mRNA_A-nodosum_M_contig1043.2.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=1348bp|location=Sequence derived from alignment at A-nodosum_M_contig1043:17046..18393+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig1043:17046..18393+ >mRNA_A-nodosum_M_contig1043.2.1 ID=mRNA_A-nodosum_M_contig1043.2.1|Name=mRNA_A-nodosum_M_contig1043.2.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=321bp|location=Sequence derived from alignment at A-nodosum_M_contig1043:17046..18393+ (Ascophyllum nodosum dioecious)back to top |