mRNA_A-nodosum_M_contig1041.17.2 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig1041.17.2 vs. uniprot
Match: D7G2N4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2N4_ECTSI) HSP 1 Score: 224 bits (572), Expect = 1.340e-66 Identity = 117/184 (63.59%), Postives = 144/184 (78.26%), Query Frame = 1
Query: 451 TTNNGRPGGREDELIALQIRKLAQQKELANEFNDILTREGGLNEHTRQTCKNLEYAIAIATRPGAIDYYRAPEEIERIVKNGDLVALTSRIARVQQDIDQVKKDIQQA----ADLSAKARAQ-NPKPACSSFAEWSTFYGEPNPPKFGGVLTTFEKNAKIYGGTNHHRAFKTQATVMKKGFLTR 987
+T+N + R+DEL AL++RKL QQ+ELA EFN ILTR+GGLN+ RQTCKNLEYAIAIATRPG I+YYR EE RIV NG+L LT++IAR+Q+DIDQV++DIQQA + +A A+AQ + +P CSS AEW YGEP P G++T FE++ KIYGGTNHHRAFKTQATVMKKG +TR
Sbjct: 4 STSNHQGSRRQDELTALKVRKLGQQEELAKEFNFILTRQGGLNDQARQTCKNLEYAIAIATRPGQIEYYRPSEEAARIVANGELTVLTNKIARLQRDIDQVEQDIQQADVVASSTAAAAQAQPSARPPCSSLAEWFAAYGEPAPSASSGLMTNFEESPKIYGGTNHHRAFKTQATVMKKGRITR 187
BLAST of mRNA_A-nodosum_M_contig1041.17.2 vs. uniprot
Match: A0A7S2UW48_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UW48_9STRA) HSP 1 Score: 162 bits (411), Expect = 3.300e-43 Identity = 80/164 (48.78%), Postives = 115/164 (70.12%), Query Frame = 1
Query: 484 DELIALQIRKLAQQKELANEFNDILTREGGLNEHTRQTCKNLEYAIAIATRPGAIDYYRAPEEIERIVKNGDLVALTSRIARVQQDIDQVKKDIQQAADLSAKARAQNPKPACSSFAEWSTFYGEPNPPKFGGVLTTFEKNAKIYGGTNHHRAFKTQATVMKKG 975
++L + KLAQQK L++EFN+ILTREGGLNE +RQ CKNLE A+A+A RPG +YY+AP E++RI+ DL LT++I ++Q+++DQ+ +I+Q LS + +Q P ++ +W YG P PP G L+ FE + K+YGGT HHRAFK+Q+ +KKG
Sbjct: 24 EQLYEQKASKLAQQKNLSDEFNEILTREGGLNEVSRQACKNLEAAVAVAQRPGYFEYYQAPAEVQRIIAADDLKLLTNKINQIQRELDQIDSEIEQ---LSKQHYSQRNPPQVNNLGQWFAVYGTPKPPP-NGTLSVFEPSDKVYGGTQHHRAFKSQSRSLKKG 183
BLAST of mRNA_A-nodosum_M_contig1041.17.2 vs. uniprot
Match: A0A7S2SKE1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SKE1_9STRA) HSP 1 Score: 145 bits (365), Expect = 1.180e-36 Identity = 76/175 (43.43%), Postives = 108/175 (61.71%), Query Frame = 1
Query: 472 GGREDELIALQIRKLAQQKELANEFNDILTREGGLNEHTRQTCKNLEYAIAIATRPGAIDYYRAPEEIERIVKNGDLVALTSRIARVQQDIDQVKKDIQQAADLSAKARAQNPKPACS---SFAEWSTFYGEPNPPKFGGVLTTFEKNAKIYGGTNHHRAFKTQATVMKKGFLTR 987
GG D L+A ++ KL QQK + +E N ILTRE GLN+ + +T +NLE A+ ++ +PG +Y++AP E++ V+N DLV LT ++ R+Q +IDQ+ +I+ A PA S +W +G P P G +TF+ KIYGGTNHHRAFKTQ+ MK+G LTR
Sbjct: 22 GGTVDGLLAAKVAKLDQQKRVTDEMNAILTRENGLNDTSHKTMRNLEVAVVVSKQPGFFEYFQAPSEVQAAVRNNDLVQLTKKVKRIQSEIDQIDAEIEHLRSKQTPAA-----PALGEMRSLKQWLAHHGAPKQPP-SGYFSTFQDAPKIYGGTNHHRAFKTQSMTMKRGRLTR 190
BLAST of mRNA_A-nodosum_M_contig1041.17.2 vs. uniprot
Match: A0A3R6VT06_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6VT06_9STRA) HSP 1 Score: 132 bits (332), Expect = 2.920e-32 Identity = 75/175 (42.86%), Postives = 104/175 (59.43%), Query Frame = 1
Query: 472 GGREDELIALQIRK---LAQQKELANEFNDILTREGGLNEHTRQTCKNLEYAIAIATRPGAIDYYRAPEEIERIVKNGDLVALTSRIARVQQDIDQVKKDIQQAADLSAKARAQNPKPACSSFAEWSTFYGEPNPPKFGGVLTTFEKNAKIYGGTNHHRAFKTQATVMKKGFLTR 987
GG ED LQ +K L Q+E A+ FN +L+ GGLNE +R+ CKNLE AI + +PG Y+ P+ ++ +VKNG+L L + I ++QQ ID V +I A +A A + S +W + YG P P G+LT F N K+YGGT H+ AFKTQ+T MKKG +T+
Sbjct: 4 GGMED----LQKKKEELLHAQREKADRFNALLSGPGGLNETSRKVCKNLEAAITASKKPGYFMYFEQPDVVKAVVKNGELRKLQTAIVQIQQKIDLVDAEITNNARANATTTASGRESEIQSLKQWLSTYGTPKPVS-SGILTCFSANPKVYGGTEHYSAFKTQSTTMKKGRITK 173
BLAST of mRNA_A-nodosum_M_contig1041.17.2 vs. uniprot
Match: A0A1V9ZEM2_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZEM2_9STRA) HSP 1 Score: 130 bits (326), Expect = 1.570e-31 Identity = 72/168 (42.86%), Postives = 104/168 (61.90%), Query Frame = 1
Query: 484 DELIALQIRKLAQQKELANEFNDILTREGGLNEHTRQTCKNLEYAIAIATRPGAIDYYRAPEEIERIVKNGDLVALTSRIARVQQDIDQVKKDIQQAADLSAKARAQNPKPACSSFAEWSTFYGEPNPPKFGGVLTTFEKNAKIYGGTNHHRAFKTQATVMKKGFLTR 987
DEL A + L Q+E A+ F+++L GGLNE +R+TCKNLE AI + +PG YY P+ ++ +VKNG+L L I ++QQ IDQ+ ++ A+ +AKA A S +W + YG P P G+LT+F + K+YGGT H+ AFK+Q+ MKKG LT+
Sbjct: 2 DELRAKKAELLLAQQEKADRFHELLVGPGGLNEASRKTCKNLEAAITASKKPGYFLYYEQPDVVKAVVKNGELRKLQGVIVQLQQKIDQIDAEL---ANHAAKAAAAPVTNEVQSLKQWFSTYGTPKPVT-SGMLTSFATDPKVYGGTEHYSAFKSQSLTMKKGRLTK 165
BLAST of mRNA_A-nodosum_M_contig1041.17.2 vs. uniprot
Match: A0A6G0X4V5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X4V5_9STRA) HSP 1 Score: 128 bits (322), Expect = 6.150e-31 Identity = 69/158 (43.67%), Postives = 97/158 (61.39%), Query Frame = 1
Query: 514 LAQQKELANEFNDILTREGGLNEHTRQTCKNLEYAIAIATRPGAIDYYRAPEEIERIVKNGDLVALTSRIARVQQDIDQVKKDIQQAADLSAKARAQNPKPACSSFAEWSTFYGEPNPPKFGGVLTTFEKNAKIYGGTNHHRAFKTQATVMKKGFLTR 987
L Q++ A++F+ IL+ GGLNE +R+TCKNLE AI+ + +PG Y+ PE ++ I+KNG+L L + I ++ Q I+QV +I A +F +W T YG P P GVLT+F N K+YGGT H+ AFKTQ+T MKKG LT+
Sbjct: 12 LHAQRDKADKFHAILSGPGGLNETSRKTCKNLEAAISASKKPGYFSYFDQPEVVKAIIKNGELRKLQTAILQLHQKIEQVDVEIANHTKAGNVPGAAGTASDIQTFKQWFTTYGTPKPVT-SGVLTSFSANPKVYGGTEHYSAFKTQSTTMKKGRLTK 168
BLAST of mRNA_A-nodosum_M_contig1041.17.2 vs. uniprot
Match: A0A067CQ53_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CQ53_SAPPC) HSP 1 Score: 126 bits (317), Expect = 2.460e-30 Identity = 78/168 (46.43%), Postives = 106/168 (63.10%), Query Frame = 1
Query: 496 ALQIRK---LAQQKELANEFNDILTREGGLNEHTRQTCKNLEYAIAIATRPGAIDYYRAPEEIERIVKNGDLVALTSRIARVQQDIDQVKKDIQ-QAADLSAKARAQNPKPACSSFAEWSTFYGEPNPPKFGGVLTTFEKNAKIYGGTNHHRAFKTQATVMKKGFLTR 987
AL+ +K L QKE A+ F+++LT GLNE +R+TCKNLE AI + +PG YY P+ + IVKNG+L L S I ++QQ IDQV +I+ QAA SA A A+ + +W + YG P P GVLT+F + K+YGGT H+ AFK+Q+ MKKG LT+
Sbjct: 3 ALRAKKEELLFAQKERADRFHELLT---GLNEASRKTCKNLEAAITASKKPGYFLYYEQPDVAKAIVKNGELRKLQSAIVQLQQKIDQVDAEIEVQAAKSSAPAPAE-----VQTLKQWFSTYGTPKPVT-SGVLTSFAADPKVYGGTEHYSAFKSQSLTMKKGRLTK 161
BLAST of mRNA_A-nodosum_M_contig1041.17.2 vs. uniprot
Match: A0A485KK74_9STRA (Aste57867_8395 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KK74_9STRA) HSP 1 Score: 125 bits (314), Expect = 1.040e-29 Identity = 67/158 (42.41%), Postives = 97/158 (61.39%), Query Frame = 1
Query: 514 LAQQKELANEFNDILTREGGLNEHTRQTCKNLEYAIAIATRPGAIDYYRAPEEIERIVKNGDLVALTSRIARVQQDIDQVKKDIQQAADLSAKARAQNPKPACSSFAEWSTFYGEPNPPKFGGVLTTFEKNAKIYGGTNHHRAFKTQATVMKKGFLTR 987
L Q+E A++FN++L GGLNE +R+TCKNLE AI+ + +PG YY P+ + IVKNG+L + + + +QQ I+QV +I+ A + + +W YG P P G+LT+F NAK+YGGT H+ AFK+Q+T MKKG LT+
Sbjct: 23 LHAQREKADKFNEVLNAPGGLNEVSRKTCKNLEAAISASKKPGYFMYYEQPDVAKAIVKNGELKKIHAAVMLLQQKIEQVDVEIENQKKTLASGVGGG-ESEIQNLKQWLATYGAPKPVS-SGMLTSFNSNAKVYGGTEHYSAFKSQSTTMKKGRLTK 178
BLAST of mRNA_A-nodosum_M_contig1041.17.2 vs. uniprot
Match: A0A7S2FSZ0_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FSZ0_9STRA) HSP 1 Score: 123 bits (309), Expect = 4.290e-29 Identity = 67/167 (40.12%), Postives = 99/167 (59.28%), Query Frame = 1
Query: 493 IALQIRKLAQQKELANEFNDILTREG--GLNEHTRQTCKNLEYAIAIATRPGAIDYYRAPEEIERIVKNGDLVALTSRIARVQQDIDQVKKDIQQAADLSAKARAQNPKPACSSFAEWSTFYGEPNPPKFGGVLTTFEKNAKIYGGTNHHRAFKTQATVMKKGFLTR 987
+ ++ KL +QK +A+E N++LTR G GLNE +R+T KNLE A+ ++ RPG +YY+ E+E I KNG++ L ++ R+ +I Q+ + Q + K + P +S A+W+ YG P G + F KIYGGT HHRAFKTQ+ MK+G L R
Sbjct: 7 VRAKMAKLKEQKRVADEINELLTRPGEDGLNESSRKTMKNLEVAVVVSKRPGFFEYYKPAPEVEAIQKNGEIQHLVKKLNRLGGEIAQLDAESQNI-EAMRKPLKMSSGPELTSLAQWNARYGTVEKPVPSGFYSGFNDAPKIYGGTEHHRAFKTQSRTMKRGRLIR 172
BLAST of mRNA_A-nodosum_M_contig1041.17.2 vs. uniprot
Match: A0A812TWU8_SYMMI (Hypothetical protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812TWU8_SYMMI) HSP 1 Score: 123 bits (309), Expect = 4.810e-29 Identity = 66/168 (39.29%), Postives = 104/168 (61.90%), Query Frame = 1
Query: 502 QIRKLAQQKELANEFNDILTREGGLNEHTRQTCKNLEYAIAIATRPGAIDYYRAPEEIERIVKNGDLVALTSRIARVQQDIDQVKKDIQQAADLSAKARAQNPKP-----ACSSFAEWSTFYGEP-NPPKFGGVLTTFEKNAKIYGGTNHHRAFKTQATVMKKGFLTR 987
+++KL +QK L++ N++LT++GGLN++++ KNL AIA+A +PG +YY P E+ I + L +L + +V ++IDQ+ +I A + P+P + +S ++W YG P N +TTF+ + KIYGGTNHHRAFKTQA+ MKKG +T+
Sbjct: 16 KVQKLNEQKALSDRMNELLTKKGGLNDNSKNVRKNLSAAIAVAKQPGYFEYYETPSEVREIEDSKILSSLVKSLGKVHREIDQINSEI-------AHHHQKGPEPPKAESSLTSMSQWFETYGRPENTHCLEERMTTFQPSPKIYGGTNHHRAFKTQASNMKKGRVTK 176 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1041.17.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1041.17.2 >prot_A-nodosum_M_contig1041.17.2 ID=prot_A-nodosum_M_contig1041.17.2|Name=mRNA_A-nodosum_M_contig1041.17.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=196bp MPNLFASTRSAMELVDTTNNGRPGGREDELIALQIRKLAQQKELANEFNDback to top mRNA from alignment at A-nodosum_M_contig1041:156332..159741+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig1041.17.2 ID=mRNA_A-nodosum_M_contig1041.17.2|Name=mRNA_A-nodosum_M_contig1041.17.2|organism=Ascophyllum nodosum dioecious|type=mRNA|length=3410bp|location=Sequence derived from alignment at A-nodosum_M_contig1041:156332..159741+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig1041:156332..159741+ >mRNA_A-nodosum_M_contig1041.17.2 ID=mRNA_A-nodosum_M_contig1041.17.2|Name=mRNA_A-nodosum_M_contig1041.17.2|organism=Ascophyllum nodosum dioecious|type=CDS|length=588bp|location=Sequence derived from alignment at A-nodosum_M_contig1041:156332..159741+ (Ascophyllum nodosum dioecious)back to top |