mRNA_A-nodosum_M_contig1039.10.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig1039.10.1 vs. uniprot
Match: D7G9E3_ECTSI (ELM2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9E3_ECTSI) HSP 1 Score: 377 bits (969), Expect = 6.810e-106 Identity = 317/889 (35.66%), Postives = 399/889 (44.88%), Query Frame = 1
Query: 2491 VWRSIRDWDPRSRGMLAEYLHAAKEVVQMKQARPGVAIHVRLGGISVGVDPGDGHIDSTDRAGSYAVWAVTAGRH---DACDVVRVACSEMAQTEVPRSAIQRVQCEEEALAALVKTRCILDDFDPALDLLANSSSGPQSVEQWTFNQVRTLEGALHDEFDPKRRLHGWARPGMTMDREDFIDLAAVSKRVPGKTPAQVLAFYYMYLAAAEPLTDVVYGPKAAEARRQEKVPPDYEVDKPDYLDGGPVRGSRRTANLRAGSTQTLDGLQRASPDNLKKGVPSESGSDLPKRRLSSSESQVLQLPSPKPSQEHILKASKTDVDQSTTTDTSVRHIGYEEAEPPLCQATIAKYGSGAGKCSSGPTASNLPVPRSNRSSHGVDGMTFAGCGFTEGPFDRNSDDVEGGHCVRNKTTSGAHAVTNDDVNYNSNGGRARHSAIQHGKRVGYKSTDSSLDCPPAAEIVEVQDSDEEKRSQVSGGDRGRTPPFIPDAKALLHKLLAKAAAT-----HPNTLGPQRLKRVARHMLSPSAGP--VSAPTIQPPTTDSVWPRSGAHKGTSMERPRTGRVTNIPDAIPIREAGLTEVQGHASWDRRSAPRSSLHDPHIRRRDRGYMYGVGGSSTPELGTGPPDNNVQQTLEKAPIDDMFGVMAPCWRLLERAKSYMDKDQLVYMRGLILLHAKKPMSRDQLLERAESCLQAQGHIFAAFAKMFDRI----SQPPSAPLYPTKKKQPGPNPSS----GRRQ-------VMPYIAPYALPATVPEHPGSVLYSSAPRTFRGETWEHKTVSPG-DFRS-----------CSADVSHIHHGRESSYPRPAAGKPGGVWCPPR--LGGGSDGLVQYPSGRDPPMMSISEYSRREAPNLAYAFCDGG 5040
VWRSIRDWDP SRGML+ YL AAK+ VQ KQ+RPGVAIHVRLGG D G D + A SYAVWAVTAGR+ +A V RV CSEMAQTEVP SAIQRVQCEEEALAALVK RC LDDFDPAL +L + P+S++ WT QVRTLE AL +++ RRLHGWAR GM MDREDFIDLA VSK+V GK+P QVL F+Y YLA AEPLTDVVYG +AAEAR++E + P G P R +R + N L S D++ S + D P R SS+ + L L AS+ R E+ PP + T++ P + S VD H R+ +GA+ + R R +A + +R + D PP E++EV DSD+ G + R P ++ H + A A HP+T G R A H S GP + + P +D+ H HIRR VG D ++ LE+ D+FG M PCW LLERA++Y+D+DQLVYMRGLIL H +KPM+R QLLERAESCL Q +FAAF K FDR+ ++ P P YP K P S GR V P +PA VP +SA R ET+ + G D R V + E+ P AG P PPR G++ GRD + + ++ +Y + G
Sbjct: 331 VWRSIRDWDPHSRGMLSSYLEAAKKAVQAKQSRPGVAIHVRLGGEG---DKGGTPGDKSSVASSYAVWAVTAGRNAGSNARGVARVGCSEMAQTEVPMSAIQRVQCEEEALAALVKARCTLDDFDPALKILVGDEASPESIQPWTLQQVRTLEQALAKDYNRDRRLHGWAREGMDMDREDFIDLADVSKQVSGKSPTQVLCFFYRYLATAEPLTDVVYGEEAAEARKREAILPT----------GSPGRPARESNNSTFRPAAKHMSLANPSSDSV-----SAATYDPPADRKSSTHAVPL------------LPASEA----------KGRLREREDVRPP--KHTVSP-------------------PMRSTVSPAVD------------------------HAPRSHGPAGANGNVGGEYE------RQRAAAREQMRR-------TPRDMPPGVEVLEVDDSDD-------GAEVARRAP----RGSVFHAAGSAAQAATARGHHPSTGG--RGWHAAAHAREMSWGPRPIRPRPVPPMMSDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---XXXXXXHPYHIRRE-------VGDDRMGRYSAAYEDRR-EELLEQ----DVFGFMGPCWSLLERAQAYLDQDQLVYMRGLILRHVEKPMTRAQLLERAESCLAEQRQVFAAFVKTFDRVDLIHAEAPPVPFYPAMKTARDDPPESVSYRGRMHAHADDGGVQPPFPYSRVPAAVPREYAVPPGASAARARPNETYRRVAAAAGVDARRERQPMPQYAGVWGKSVGRGYQNDEAVPPHRLAGAPYRHPSPPRGPASAARPGMMYREDGRDREARIVRSWPQQRQQQRSYEWRTDG 1093
BLAST of mRNA_A-nodosum_M_contig1039.10.1 vs. uniprot
Match: A0A6H5JX23_9PHAE (BAH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX23_9PHAE) HSP 1 Score: 369 bits (947), Expect = 1.100e-101 Identity = 300/797 (37.64%), Postives = 373/797 (46.80%), Query Frame = 1
Query: 2491 VWRSIRDWDPRSRGMLAEYLHAAKEVVQMKQARPGVAIHVRLGGISVGVDPGDGHIDSTDRAGSYAVWAVTAGRH---DACDVVRVACSEMAQTEVPRSAIQRVQCEEEALAALVKTRCILDDFDPALDLLANSSSGPQSVEQWTFNQVRTLEGALHDEFDPKRRLHGWARPGMTMDREDFIDLAAVSKRVPGKTPAQVLAFYYMYLAAAEPLTDVVYGPKAAEARRQEKVPPDYEVDKPDYLDGGPVRGSRRTANLRAGSTQTLDGLQRASPDNLKKGVPSESGSDLPKRRLSSSESQVLQLPSPKPSQEHILKASKTDVDQSTTTDTSVRHIGYEEAEPPLCQATIAKYGSGAGKCSSGPTASNLPVPRSNRSSHGVDGMTFAGCGFTEGPFDRNSDDVEGGHCVRNKTTSGAHAVTNDDVNYNSNGGRARHSAIQHGKRVGYKSTDSSLDCPPAAEIVEVQDSDEEKRSQVSGGDRGRTPP----FIPDAKALLHKLLAKAAATHPNTLGPQRLKRVARHMLSPSAGP--VSAPTIQPPTTDSVWPRSGAHKGTSMERPRT----GRVTNIPDAIPIREAGLTEVQ---GHASWDRRSAPRSSLHDPHIRRRDRGYMYGVGGSSTPELGTGPPDNNVQQTLEKAPIDDMFGVMAPCWRLLERAKSYMDKDQLVYMRGLILLHAKKPMSRDQLLERAESCLQAQGHIFAAFAKMFDRI----SQPPSAPLYPTKKKQPGPNPSS--------------GRRQVMPYI-APYALPATVPEHPGSVLYSSAPR-TFR 4773
VWRSIRDWDP SRGML+ YL AAK+ VQ KQ+RPGV +HVRLGG D G D + A SYAVWAVTAGR +A V RV CSEMAQTEVP SAIQRVQCEEEALAALVK RC LDDFDPAL +L + P+S++ WT QVRTLE AL + + RRLHGWAR GM +DRED IDLA V K++PGK+P QVL F+Y YLA AEPLTDVVYG +AAEAR++E + P D P + R A + +T D + A+ D P++ S P PL A+ AK GS + P + P + S VD H R+ +GA N N G R A + + + D PP E++EV+DSD+ G + R P F A +A A HP+T + A H S GP + + P +D+ + RP GR TN+ A+P R AG + H HIRR VG D ++ LE+ D+FG M PCW LLE+A++Y+D+DQLVYMRGLIL H +KPM+R QLLERAESCL Q +FAAF K FDR+ ++ P P YP K P S G R PY P A+P P PG+ + P T+R
Sbjct: 533 VWRSIRDWDPHSRGMLSSYLEAAKKAVQAKQSRPGVVVHVRLGGKG---DKGGTPGDESSVASSYAVWAVTAGRDAGSNARGVARVGCSEMAQTEVPISAIQRVQCEEEALAALVKARCTLDDFDPALKILVGDEASPESIQPWTLQQVRTLEQALAKDCNRDRRLHGWAREGMDIDREDLIDLADVIKQIPGKSPTQVLCFFYRYLATAEPLTDVVYGEEAAEARKREAILP---TDSPGRESN--ISTFRLAAKHMSSATPASDSVGAATYD-----PPADRKSSTP--------------------------------------------------AVPLLPASEAK-GSLREREDVRPPKHTVSPPMRSTVSPAVD------------------------HAPRSHGPAGA--------NRNVGGEYERQRAARE------QMWRTPRDMPPGVEVLEVEDSDD-------GAEIARRAPRGSAFHAAGSAAQ---VATARGHHPST--GEGGWHPAGHAPEISWGPRPIRPRPVPPVMSDAAAAADQRRYLPTAARPVPPNWHGRRTNV--AMP-RHAGQQPPRLQXXXXXXXXXXXXXXXXHPYHIRRE-------VGDGRMGRYSAAYEDRR-EELLEQ----DVFGFMGPCWSLLEKAQAYLDQDQLVYMRGLILRHVQKPMTRAQLLERAESCLAEQPQVFAAFVKTFDRVDLIHAEAPPVPFYPAMKTARDDPPESVSYRGRIHSHADDGGARPPFPYSRVPAAVPREYPVPPGATAARARPNDTYR 1200
BLAST of mRNA_A-nodosum_M_contig1039.10.1 vs. uniprot
Match: A0A6H5K0T4_9PHAE (BAH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0T4_9PHAE) HSP 1 Score: 348 bits (894), Expect = 1.790e-95 Identity = 274/746 (36.73%), Postives = 349/746 (46.78%), Query Frame = 1
Query: 2491 VWRSIRDWDPRSRGMLAEYLHAAKEVVQMKQARPGVAIHVRLGGISVGVDPGDGHIDSTDRAGSYAVWAVTAGRHDACDVVRVACSEMAQTEVPRSAIQRVQCEEEALAALVKTRCILDDFDPALDLLANSSSGPQSVEQWTFNQVRTLEGALHDEFDPKRRLHGWARPGMTMDREDFIDLAAVSKRVPGKTPAQVLAFYYMYLAAAEPLTDVVYGPKAAEARRQEKVP-PDYEVDKPDYLDGGPVRGSRRTANLRAGSTQTLDGLQRASPDNLKKGVPSESGSDL-PKRRLSSSESQVLQLPSPKPSQEHILKASKTDVDQSTTTDTSVRHIGYEEAEPPLCQATIAKYGSGAGKCSSGPTASNLPVPRSNRSSHGVDGMTFAGCGFTEGPFDRNSDDVEGGHCVRNKTTSGAHAVTNDDVNYNSNGGRARHSAIQHGKRVGYKSTDSSLDCPPAAEIVEVQDSDEEKRSQVSGGDRGRTPPFIPDAKALLHKLLAKAAATHPNTLGPQRLKRVARHMLSPSAGPVSAPTIQPPTTDSVWPRSGAHKGTSMERPRTGRVTNIPDAIPIREAGLTEVQGHASWDRRSAPRSSLHDPHIRRRDRGYMYGVGGSSTPELGTGPPDNNVQQTLEKAPIDDMFGVMAPCWRLLERAKSYMDKDQLVYMRGLILLHAKKPMSRDQLLERAESCLQAQGHIFAAFAKMFDRISQPPSAPLYPTKKKQPGPNPSSGRRQVMPYIAPYALPATV 4722
VW+S+RDWDP SRGMLA YL AA +V+ KQARPGVAIHVRLGG + D SYAVWA+T G A VRVACSE+AQTE+P SAIQR CEEEAL ALVKT C+LD+F+PAL +LA+S++ P+SV+ W+ +QVRTLE AL +FD R GWARPG+ MDREDFID+A VSK VPGKTPAQVL FY+ YLAAA PLTDVVYGP+AAEAR++EK+ D +V+ P G G P+ SGSD P R++ E + SP P+ G EE +AT + G+G+ S G+ G G G D SD G +++ + G+ A G R P AEI++V+ D+ + S RT + ++A PQR + V R P+S P P +G SM P ++P R D+RS S + R G GG + +FG MAPCW +LERA +YMD DQL YM+ LIL H ++PMSRDQLL+R +SCL Q HI+ AF KMFD + Q P PL+P ++ P P G +P+ A A P V
Sbjct: 525 VWQSVRDWDPHSRGMLAGYLQAANTMVRSKQARPGVAIHVRLGGKNE--DGXXXXXXXXXXXXSYAVWALTTGVSSASGDVRVACSEIAQTEIPASAIQR--CEEEALEALVKTNCVLDNFEPALKMLADSTTSPESVQPWSLDQVRTLEAALDKDFDVNGRSQGWARPGIDMDREDFIDIAKVSKEVPGKTPAQVLQFYFRYLAAARPLTDVVYGPEAAEARKREKLSNDDSDVEIPVTPRGA-------------------------------SGRPARSGSDTSPSHRVTKQEPAGTRRVSPSPN-------------------------GSEEPR----EATTSPKGTGSRTAS-------------------TSGLPMRGDGPRTG--DNGSDSTHGTR--KDRPSEGSEAAP--------------------GPR------------PRDAEILQVESGDDRSNHRTS-----RTSAPVARGPGEQDSRSSQAV--------PQR-RTVWR--------PISTPA----------PNQHPSEGLSMP----------PRSVPGRVR-----------DQRSDGGSDVVMAEGR-------SGFGGG-----------------------EQVFGFMAPCWHILERAHAYMDPDQLSYMKSLILAHLRRPMSRDQLLKRVKSCLHEQQHIYTAFVKMFDHVDQTPLMPLFPATRRTPAVMPPQGH---VPHAAFAAYPPPV 1065
BLAST of mRNA_A-nodosum_M_contig1039.10.1 vs. uniprot
Match: A0A6H5JLS8_9PHAE (ELM2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLS8_9PHAE) HSP 1 Score: 338 bits (868), Expect = 9.110e-92 Identity = 272/725 (37.52%), Postives = 355/725 (48.97%), Query Frame = 1
Query: 2491 VWRSIRDWDPRSRGMLAEYLHAAKEVVQMKQARPGVAIHVRLGGISVGVDPGDGHIDS--TDRAGSYAVWAVTAGRHDACDVVRVACSEMAQTEVPRSAIQRVQCEEEALAALVKTRCILDDFDPALDLLANSSSGPQSVEQWTFNQVRTLEGALHDEFDPKRRLHGWARPGMTMDREDFIDLAAVSKRVPGKTPAQVLAFYYMYLAAAEPLTDVVYGPKAAEARRQEKVPPDYEVDKPDYLDGGPVRGSRRTANLRAGSTQTLDGLQRASPDNLKKGVPSESGSDLPKRRLSSSESQVLQLPSPKPSQEHILKASKTDVDQSTTTDTS-VRHIGYEEAEPPLCQATIAKYGSGAGKCSSGPTASNLPVPRSNRSSHGVDGMTFAGCGFTEGPFDRNSDDVEGGHCVRNKTTSGAHAVTNDDVNYNSNGGRARHSAIQHGKRVGYKSTDSSLDCPPAAEIVEVQDSDEEKRSQVSGGDRGRTPPFIPDAKALLHKLLAKAAATHPNTLGPQRLKRVARHMLSPSAGPVSAPTIQPPTTDSVWPRSGAHKGTSMERPRTGRVTNIPDAIPIREAGLTEVQGHASWDRRSAPRSSLHDPHIRRRDRGYMYGVGGSSTPELGTGPPDNNVQQTLEKAPIDDMFGVMAPCWRLLERAKSYMDKDQLVYMRGLILLHAKKPMSRDQLLERAESCLQAQGHIFAAFAKMFDRISQPPS----APLYPTKKK 4644
VWRSIR+WDP+SR ML+ YLHAAK+VV+ KQA PGVA+HVRLG +G++++ T AGSYAVWA+T G H A V+RVACSE+AQT+VP AIQRVQ EE+AL ALVK RC LDDF PAL + +S +SV+ W +QVR L+ AL + FDP R HGWAR GM ++REDFIDLA VSK+VPGKTP QVL+F+Y YLAAA+PLTDVVYG +AAEAR+ E V P G P S TA L+ ++ G P SG + R + P+P + + + + TT T+ R + ++ + L T A G A P + P S G R + R AI+H G S ++S D E++EV+ + G RG I L+ L AA GP+ R R + PSAG + P +D G H GT++ RP GHA +S+P ++ + RR R + G S + G P + + ++ FG MAPCWR LE A +++DKDQL YM+GLI H +KPM+RDQLLERA+SCLQ Q IF AF K FDRIS + PLY +K+
Sbjct: 539 VWRSIRNWDPQSRHMLSTYLHAAKDVVKAKQASPGVAVHVRLGDAG---SKNNGNVEAATTSVAGSYAVWAITVGCHSA-GVIRVACSEIAQTKVPIPAIQRVQSEEQALGALVKARCTLDDFKPALKVFDQASM--ESVDPWKLSQVRNLKQALEEHFDPNPRSHGWAREGMDLEREDFIDLANVSKQVPGKTPTQVLSFFYRYLAAAKPLTDVVYGKEAAEARKLEAV-------LPPGASGFPEEAS--TAKLKPPASHVTVG-------------PYTSGPAMRSRNIV--------RPNPPQTPHPVARVAPGSSASMTTRATAECRGVRPDDLKRYLSNVTKAALGGRA------PAVAAYRAPAS-------------------GSVSREYE---------------------------------RQRAIRH---QGAASGNTSAD----VEVLEVR--------KYHGATRG---VGIAQGSQLVTGLGYTAARARQ--YGPEARSRQTRVL--PSAG------VTAPASD------GYHTGTAVARP----------------------PGHAP---QSSP--AIQNTVQARRVRTRVGGRDLGSIVKNGGYPAYDEPSEVAMDEEVE--FGFMAPCWRQLEMAHAFIDKDQLRYMKGLITTHVRKPMTRDQLLERADSCLQGQPEIFVAFVKTFDRISHVHAEAHLVPLYSGRKR 1106
BLAST of mRNA_A-nodosum_M_contig1039.10.1 vs. uniprot
Match: D8LCW0_ECTSI (ELM2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCW0_ECTSI) HSP 1 Score: 330 bits (845), Expect = 7.670e-90 Identity = 270/736 (36.68%), Postives = 338/736 (45.92%), Query Frame = 1
Query: 2491 VWRSIRDWDPRSRGMLAEYLHAAKEVVQMKQARPGVAIHVRLGGISVGVDPGDGHIDSTDRAGSYAVWAVTAGRHDACDVVRVACSEMAQTEVPRSAIQRVQCEEEALAALVKTRCILDDFDPALDLLANSSSGPQSVEQWTFNQVRTLEGALHDEFDPKRRLHGWARPGMTMDREDFIDLAAVSKRVPGKTPAQVLAFYYMYLAAAEPLTDVVYGPKAAEARRQEKVPPDYEVDKPDYLDGGPVRGSRRTANLRAGSTQTLDGLQRASPDNLKKGVPSESGSDLPKRRLSSSESQVLQLPSPKPSQEHILKASKTDVDQSTTTDTSVRHIGYEEAEPPLCQATIAKYGSGAGKCSSGPTASNLPVPRSNRSSHGVDGMTFAGCGFTEGPFDRNSDDVEGGHCVRNKTTSGAHAVTNDDVNYNSNGGRARHSAIQHGKRVGYKSTDSSLDCPPAAEIVEVQDSDEEKRSQVSGGDRGRTPPFIPDAKALLHKLLAKAAATHPNTLGPQRLKRVARHMLSPSAGPVSAPTIQPPTTDSVWPRSGAHKGTSMERPRTGRVTNIPDAIPIREAGLTEVQGHASWDRRSAPRSSLHDPHIRRRDRGYMYGVGGSSTPELGTGPPDNNVQQTLEKAPIDDMFGVMAPCWRLLERAKSYMDKDQLVYMRGLILLHAKKPMSRDQLLERAESCLQAQGHIFAAFAKMFDRISQPPS----APLYPTKKKQPGPNPSSGRRQVM 4686
VWRSIR+WDP+SR ML+ YLHAAK+V+Q KQA PGVA+HVRLG S GD + +T A SYAVWA+TAGRH V RVACSEMAQT VP SA+QRVQ EEEALAALVK RC LDDF PAL +L +S+ +SV WT +QVRTLE L EF RRLHGWAR GM ++REDFIDLA V K+V GKT AQVL+FYY YLA A+PLTDVVYG +AAEAR+ E + P P TA L+ ++ T G P +G + R + Q P KP + I++A+ + T R + ++ + PL AT+A G G +S P + P N S G G G + + +E V+N H G T S + + VSG + GR A++ LA T P G + + VAR G Q H + P+ + D D FG M PCWRLLERA +YMD+DQLVYMRGL++ H KPM+R QLLERAESCLQ Q IF AF K+FDRI+ P + PLY + K+P P+ + R V+
Sbjct: 382 VWRSIRNWDPQSRQMLSTYLHAAKDVLQKKQASPGVAVHVRLGD-SGSAAKGDKGV-TTSVASSYAVWAITAGRHSP-GVTRVACSEMAQTNVPMSAVQRVQSEEEALAALVKARCTLDDFRPALKVLDQAST--ESVAPWTLSQVRTLEQVLEKEFKWDRRLHGWAREGMDLEREDFIDLANVCKQVRGKTRAQVLSFYYRYLAHAKPLTDVVYGKEAAEARKLEAILPAGTTKSPKETS---------TAQLKPATSHTAAG-------------PPTNGPAIRNRSI------ATQDPQRKP--KLIIQAAPG----PPVSTTQNRGVMPDDHKRPL--ATVATAGLGVRVSASAP---HYAPPNGNVSREYQRRAVRRGPGTASGNGFADVEVLE----VKNP----------------------------HNTARGVCFTPGS------------------QYTSVSGFEAGRERQVGTKAQSRQISALASVGMTAPAPYGYRNVMAVARQ------------------------------------------------------GERLPQSHVPVHVNAKPKEAAADE---------------------------------------DGEFGFMYPCWRLLERANAYMDQDQLVYMRGLLVTHIHKPMTRAQLLERAESCLQEQPEIFMAFVKVFDRINHPYTDPHPVPLY-SGTKRPTPDTPAEPRSVL 929
BLAST of mRNA_A-nodosum_M_contig1039.10.1 vs. uniprot
Match: A0A6H5KVI2_9PHAE (ELM2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVI2_9PHAE) HSP 1 Score: 332 bits (852), Expect = 1.030e-89 Identity = 274/741 (36.98%), Postives = 348/741 (46.96%), Query Frame = 1
Query: 2491 VWRSIRDWDPRSRGMLAEYLHAAKEVVQMKQARPGVAIHVRLG--GISVGVDPGDGHIDSTDRAGSYAVWAVTAGRHDACDVVRVACSEMAQTEVPRSAIQRVQCEEEALAALVKTRCILDDFDPALDLLANSSSGPQSVEQWTFNQVRTLEGALHDEFDPKRRLHGWARPGMTMDREDFIDLAAVSKRVPGKTPAQVLAFYYMYLAAAEPLTDVVYGPKAAEARRQEKVPPDYEVDKPDYLDGGPVRGSRRTANLRAGSTQTLDGLQRASPDNLKKGVPSESGSDLPKRRLSSSESQVLQLPSPKPSQEHILKASKTDVDQSTTTDTSVRHIGYEEAEPPLCQATIAKYGSGAGKCSSGP--TASNLPVPRS-NRSSHGVDGMTFAGCGFTEGPFDRNSDDVEGGHCVRNKTTSGAHAVTNDDVNYNSNGGRARHSAIQHGKRVGYKSTDSSLDCPPAAEIVEVQDSDEEKRSQVSGGDRGRTPPFIPDAKALLHKLLAKAAATHPNTLGPQRLKRVARHMLSPSAGPVSAPTIQPPTTDSVWPRSGAHKGTSMERPRTGRVTNIPDAIPIREAGLTEVQGHASWDRRSAPRSSLHDPHIRRRDRGYMYGVGGSSTPELGTGPPDNNVQQTLEKAPIDDMFGVMAPCWRLLERAKSYMDKDQLVYMRGLILLHAKKPMSRDQLLERAESCLQAQGHIFAAFAKMFDRISQP----PSAPLYPTKKKQPGPNPSSGRRQVM 4686
VWRSIR+WDP+SR ML+ YLHAA +V+Q KQ PGVA+HVRLG G + D G +T A SYAVWA+ AGRH A VRVACSEMAQT VP SA+QRVQ EEEALAALVK RC LDDF PAL +L +S SV W +QVRTLE L EF RRLHGWAR GM +++EDFIDLA V K+V GKTPAQVL+FYY YLA A+PLTDVVYG +AAEAR+ E + P P TA L+ + T P ++ + ++ PK + ++ P P S + A R + ++ + PL AT+A G G S P +N V R R + D T +G +S DVE V + +N+ AR + G + + VSG + GR A++ + L T G + + VAR ER V DA +RE +GH + + GGSS+ G P ++ D FG M PCW LLERA +YMD+DQLVYMRGL++ + KPM+RDQLLERAESCLQ Q IF AF K+FDRI+ P P PLY + K+P P+ + R V+
Sbjct: 537 VWRSIRNWDPQSRQMLSTYLHAATDVLQKKQGFPGVAVHVRLGDRGSAAKGDKGV----TTSVANSYAVWAIMAGRHSA-GAVRVACSEMAQTTVPISAVQRVQSEEEALAALVKARCTLDDFRPALKVLDQASL--DSVAPWALSQVRTLEQVLEKEFKWDRRLHGWAREGMDLEQEDFIDLANVCKQVRGKTPAQVLSFYYRYLAHAKPLTDVVYGKEAAEARKLEAILPPGATKSPKEAS---------TAQLQPATCHTTADPPTNGPAMHQRSIATQDTRRKPKLIIQAA-------PGPPLSTTERITAEN-------------RGVMPDDHKRPL--ATVATAGLGVRMFDSAPHYAPANGHVSREYQRQAARRDSGTASG---------NSSADVE---------------VLEVKIPHNT----ARGVCLTPGSQY----------------------------TSVSGLEAGRERQVGTKAQSRQSRALTSVGTTGSAPYGYRNVMAVARQ---------------------------------GERLPHSHVAVHVDAKVMRECAGGSGRGHIASN-------------------------GGSSSSGSGGYPLYRKPKEAAVNE--DGEFGYMYPCWSLLERANAYMDQDQLVYMRGLLITNIHKPMTRDQLLERAESCLQEQPEIFMAFVKVFDRINHPYTDPPPVPLY-SGTKRPTPDTPAEPRSVL 1122
BLAST of mRNA_A-nodosum_M_contig1039.10.1 vs. uniprot
Match: D7G9E4_ECTSI (BAH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9E4_ECTSI) HSP 1 Score: 187 bits (474), Expect = 6.110e-44 Identity = 103/194 (53.09%), Postives = 129/194 (66.49%), Query Frame = 1
Query: 2797 CEEEALAALVKTRCILDDFDPALDLLANSSSGPQSVEQWTFNQVRTLEGALHDEFDPKRRLHGWARPGMTMDREDFIDLAAVSKRVPGKTPAQVLAFYYMYLAAAEPLTDVVYGPKAAEARRQEKVP---PDYEVD-KPDYLDGGPVRGSRRTANLRAGSTQTLDGLQRASPDNLKKGVPSESGSDLPKRRLSS 3366
CEE AL ALVKT C+LD+F+PAL +LA+S++ P+S++ W+ +QVRTLE AL +FD R GWARPG+ MDRED ID+A VSK VPGKTPAQVL FY+ YLAAA PLTDVVYGP+AAEAR++EK+ D EV P G P R T R + Q G +R SP S +GS+ P+ +S
Sbjct: 517 CEEAALEALVKTNCVLDNFEPALKMLADSTTSPESLQPWSLDQVRTLEAALDKDFDVNGRSQGWARPGIDMDREDCIDIAKVSKEVPGKTPAQVLQFYFRYLAAARPLTDVVYGPEAAEARKREKLSGDDSDVEVPVTPRGAAGRPARSGSDTTPSRRVTKQEPAGTRRVSP--------SPNGSEEPREATTS 702
BLAST of mRNA_A-nodosum_M_contig1039.10.1 vs. uniprot
Match: D8LCW2_ECTSI (ELM2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCW2_ECTSI) HSP 1 Score: 170 bits (430), Expect = 7.910e-40 Identity = 93/159 (58.49%), Postives = 111/159 (69.81%), Query Frame = 1
Query: 2491 VWRSIRDWDPRSRGMLAEYLHAAKEVVQMKQARPGVAIHVRLGGISVGVDPGDGHIDSTDRAGSYAVWAVTAGRHDACDVVRVACSEMAQTEVPRSAIQRVQCEEEALAALVKTRCILDDFDPALDLLANSSSGPQSVEQWTFNQVRTLEGALHDEFDP 2967
VWRSIR WDP+SR ML+ YLHAAK+VV+ KQA PGVA+HVRLG GD +T A SYAVWA+T GRH A V+RVACSEMAQT+VP AIQRVQ EE+ALAALVK RC LDDF PAL++ +S +SV+ W +QVR + + P
Sbjct: 462 VWRSIRKWDPQSRHMLSTYLHAAKDVVKAKQASPGVAVHVRLGD-GGSEKTGDVEAGTTSVASSYAVWAITVGRHSA-GVIRVACSEMAQTKVPIPAIQRVQSEEQALAALVKARCTLDDFKPALNVFDQASM--ESVDPWKLSQVRCASVTIVCKISP 616
BLAST of mRNA_A-nodosum_M_contig1039.10.1 vs. uniprot
Match: A0A6H5K2H5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2H5_9PHAE) HSP 1 Score: 102 bits (253), Expect = 9.130e-18 Identity = 81/249 (32.53%), Postives = 118/249 (47.39%), Query Frame = 1
Query: 2467 TMKCRRT*VWRSIRDWDPRSRGMLAEYLHAAKEVVQMKQARPGVAIHVRLGGISVGVDPGDGHIDSTDRAGSYAVWAVTAG-RHDACDVVRVACSEMAQTEVPRSAIQRVQCEEEALAALVKTRC--------ILDDFDPALDLLANS---SSGPQSVEQWTFNQVRTLEGALHDEFDPKR--RLHGWARPGMTMDREDFIDLAAVSKRVPGKTPAQVLAFYYMYLAAAEPLTDVVYGPKAAEARRQEK 3171
T++ T VW S+RDW R L YL A+ K+ PGV + + + GD R WAV AG + + + + V C+ +EV RS +Q Q EE A+ AL++ ++D+ AL LL N+ SGP + WT Q+ L AL FDP R R G R R++ D+ ++ V GKTP+QVL+FYY Y+A + LT+V+ +A R E+
Sbjct: 436 TLEMGGTAVWSSVRDWTASERERLDGYLEEARRAADEKRMSPGVPALISIN------NGGD------RRRKRKIAWAVMAGGKPEDKEKLLVTCAGGGVSEVSRSELQPTQVEELAMQALMREDAGNKKGKGSLIDNARTALGLLDNTMVDDSGPLAT--WTGPQIEALSKALEANFDPDRFTRSRGHER-----HRDEHTDVTSLIASVDGKTPSQVLSFYYRYMATGDALTEVMGSAEAQAKVRSER 665
BLAST of mRNA_A-nodosum_M_contig1039.10.1 vs. uniprot
Match: D7G9E6_ECTSI (ELM2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9E6_ECTSI) HSP 1 Score: 98.6 bits (244), Expect = 5.380e-17 Identity = 79/243 (32.51%), Postives = 114/243 (46.91%), Query Frame = 1
Query: 2485 T*VWRSIRDWDPRSRGMLAEYLHAAKEVVQMKQARPGVAIHVRLGGISVGVDPGDGHIDSTDRAGSYAVWAVTAG-RHDACDVVRVACSEMAQTEVPRSAIQRVQCEEEALAALVKTRC--------ILDDFDPALDLLANS---SSGPQSVEQWTFNQVRTLEGALHDEFDPKR--RLHGWARPGMTMDREDFIDLAAVSKRVPGKTPAQVLAFYYMYLAAAEPLTDVVYGPKAAEARRQEK 3171
T VW S+RDW R L YL A+ K+ PGV + + + GD R WAV AG + + + +RV C+ +EV R +Q Q EE A+ AL++ ++D+ AL LL N+ SGP + WT Q+ L AL FD R R G R R++ D+ ++ V GKTP+QVL+FYY Y+A + LT+V+ +A R E+
Sbjct: 291 TAVWSSVRDWTASERERLDGYLEEARRAADEKRMSPGVPALISIN------NGGD------RRRKRKMAWAVMAGGKPEDEEKLRVGCAGGGVSEVSRRELQPTQVEELAMQALMQEDAGNKKGKGSLMDNTRTALGLLDNTMVDDSGPLAT--WTGPQIEALSKALETHFDADRFTRSRGHER-----HRDEHTDVTSLIASVDGKTPSQVLSFYYRYMATGDALTEVMGSAEAQAKVRSER 514 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1039.10.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1039.10.1 >prot_A-nodosum_M_contig1039.10.1 ID=prot_A-nodosum_M_contig1039.10.1|Name=mRNA_A-nodosum_M_contig1039.10.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=888bp MLAEYLHAAKEVVQMKQARPGVAIHVRLGGISVGVDPGDGHIDSTDRAGSback to top mRNA from alignment at A-nodosum_M_contig1039:246712..257865+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig1039.10.1 ID=mRNA_A-nodosum_M_contig1039.10.1|Name=mRNA_A-nodosum_M_contig1039.10.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=11154bp|location=Sequence derived from alignment at A-nodosum_M_contig1039:246712..257865+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig1039:246712..257865+ >mRNA_A-nodosum_M_contig1039.10.1 ID=mRNA_A-nodosum_M_contig1039.10.1|Name=mRNA_A-nodosum_M_contig1039.10.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=2664bp|location=Sequence derived from alignment at A-nodosum_M_contig1039:246712..257865+ (Ascophyllum nodosum dioecious)back to top |