mRNA_A-nodosum_M_contig1038.21.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig1038.21.1 vs. uniprot
Match: A0A6H5K8T1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8T1_9PHAE) HSP 1 Score: 546 bits (1407), Expect = 5.590e-175 Identity = 324/713 (45.44%), Postives = 419/713 (58.77%), Query Frame = 1
Query: 580 LGDVQHALELVSKFDSDGRYYSPSGKMLYLKDNPWKMPPEAVVEQGLEAIKIFLGDVRKARENGAQVRSLKHLKVVLVGSASAGKTSLMESIIKGTKSPTEGTLEEASTVGIDLRHHLLQGTKVEFYDCAGQVDYAGMHQTFLTRRALYLLLWDVTLFHGLDPRYLEKAVYRNIMRWLYTLHLRAPGATMILVANKCDGSLADFAESTERVKILVDRLLKEWQSRRSSNHRNGGDVTVVRLLDGISRTSCVDYG-----GIDELVERFSKESATSIQVPPAWDLALEVLDDLRAGGDPLQAARAHLCLKE---TKGTNKKVINTFRTKNQLLKLWEDIVRQVSEELQSAKDMAAVSNWENALDGALWINEFAGQILRIDRDEGIFLDVVWLSKVLSPILSHKLHAEDFPTI-----------DLKRQGYPSSSRCSPVGFCTTHLERCPDPCRTGIKGKIDVN*IYFPCSPQAWRDPSPGTAGLFVRPQRVARVTWRRRI*RYVGNHASGRGM*R*TAKSY*FFCRECTPGLSG------VKLKWECDAAQSPYGLVERLISSCNVIGEVEQDLCWRYGALFTSPEMIWGDDRQVRLYKFLISYDN-----RMLSLRIIGLFSDDRVLAALRYVASAMVVLSMEWPGVQWEGWLDCLNHPQARIYLTPPGETRIGGPLLDQGAYAHSMMCDCRREADGVLRLVRQRLGTVVDT 2628
LG+ + AL LV + G LYL NPW MPPE VVE GL A+K +L DVR+A++ GA V SL+ LKVVLVGSASAGKTSLM SII G SPTEGT +ASTVG++LR LQ TKVEF+DCAGQVDYAGMHQTFLTRRALYLL+ D+T +HG+D L+KA++ +IMRWLY L+LRAPG+T++LVANKCDGS+ FAE+ ER++ V L+ W R R+ G VT + LL G+SR SC + G G+ L+ S+++AT+I VPPAWDLALEV+ LRA +P+ AAR L L G F +K++L + W +V + +++ +A +SNWE+AL+GALWI++FAG LR+D +GIFLDV+WLSK LSPILSHKL + F + R+ + VG E + + + K+ V + A D S TA V V R + H R GL+ V LKWE D A PYGL+ERLI+SC+V+GEVE CWRYGA+F S +M + + R VR YK +S + R+ + ++ G +RV A+RYVASAM+ LS EWPGV W GWLDC HP +Y+ E R+G PLL A + CDC E GVLRL + LG V+DT
Sbjct: 9 LGETEDALRLVERL----------GDSLYLHGNPWIMPPEGVVEAGLTAVKRYLVDVREAKKAGADVTSLQLLKVVLVGSASAGKTSLMHSIIAGRGSPTEGTPAQASTVGMELRPCQLQDTKVEFFDCAGQVDYAGMHQTFLTRRALYLLVVDITKYHGVDD--LDKAIHDDIMRWLYYLYLRAPGSTVVLVANKCDGSIDKFAETAERIQRRVRELVAVWHEARGLRGRSKGHVTDLTLLPGMSRVSCQEKGSPEASGLPALIALISRQAATAIHVPPAWDLALEVIGALRASCNPIAAARDKLGLPNPLPADGVADVHAFAFISKDELSRKWRSVVDNLRDDVPAAM----ISNWESALEGALWISDFAGHTLRVDGGDGIFLDVLWLSKCLSPILSHKLKNQPFENRWLWMRDDLAGDGILRREFALHIWRESVGEVVMESEEVAEALFS-VLIKLGVALPMGRRTLLAHSDRSTPTAPSDVSGSNDMLVIMR--LSETCNEHQ-----------------RTLFDGLASKMPRDRVTLKWEFDKAGPPYGLIERLIASCHVLGEVETGACWRYGAVFQSHDMRFVEGRNVRFYKIALSMTSYNESERVFTAKVFGPLDSERVWVAIRYVASAMINLSKEWPGVLWTGWLDCEKHPSQHLYMASSVEARVGDPLLPAAA-PDARRCDCLLEPGGVLRLAVEELGPVIDT 684
BLAST of mRNA_A-nodosum_M_contig1038.21.1 vs. uniprot
Match: A0A6H5JW02_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW02_9PHAE) HSP 1 Score: 509 bits (1310), Expect = 7.250e-159 Identity = 313/715 (43.78%), Postives = 420/715 (58.74%), Query Frame = 1
Query: 580 LGDVQHALELVSKFDSDGRYYSPSGKMLYLKDNPWKMPPEAVVEQGLEAIKIFLGDVRKARENGAQVRSLKHLKVVLVGSASAGKTSLMESIIKGTKSPTEGTLEEASTVGIDLRHHLLQGTKVEFYDCAGQVDYAGMHQTFLTRRALYLLLWDVTLFHGLDPRYLEKAVYRNIMRWLYTLHLRAPGATMILVANKCDGSLADFAESTERVKILVDRLLKEWQSRRS-SNHRNGGDVTVVRLLDGISRTSCVDYGGIDELVERFSKESATSIQVPPAWDLALEVLDDLRAGGDPLQAARAHLCL--KETKGTNKKVINTFRTKNQLLKLWEDIVRQVSEELQSAKDMAAVSNWENALDGALWINEFAGQILRIDRDEGIFLDVVWLSKVLSPILSHKLHAEDFPTIDLKRQGYPSSSRCSPVGFCTTHLER------CPDPCRTGIKGKIDVN*IYFPCSPQAWRDPSPGTAGLFVRPQRVARVTWR--RRI*RYVGNHASGRGM*R*TAKSY*FFCRECTPGLSGVKLKWECDAAQSPYGLVERLISSCNVIGEVEQDLCWRYGALFTSPEMIWGDDRQVRLYKFLISYDN------RMLSLRIIGLFSDDRVLAALRYVASAMVVLSMEWPGVQWEGWLDCLNHPQARIYLTPPGETRIGGPLL-DQGAYAHSMMCDCRREADGVLRLVRQRLGTVVDTRLF-VPEVRGEKRS 2667
+G+ +HAL +++ S ++ L NPW MPPE VVE+GL A++ +L DVRKA E GA+V++LK LKVVLVGS+ AGKTSL+ SI++G PT GT E STVGI+L H LQGT VEFYDCAGQVDY GMHQ FLTRRALYLL+WDV HG L++ ++++IMRWLY LHLRAPG+T+ILVANKCDGS+ DF + V+ V L KEW+ R S+ R D+TV L+ S SC+D G+ E+++R + +SA S++VPPAW LAL LD LR DP QA R L L + G +++ +F T+N L++ W+ +V+ V EL+S + AVS+ + A++GALWI+EFAGQ+LR+ +G+FLDVVWLS L PIL HKL + FP + + + F HL P+ + I + P P + P G A RP ++R R+ G + + + + RE T L W D+A PYGLVER+I+SC+ +G VE LCWRYGA+F S M D RLY F++ YD+ R+LS+R+ G D+RV AALR+VAS++V +S +WPGV WEGW C + R Y + IG LL D A CDC VLRLV +RLG VVDT+ +V G +R+
Sbjct: 161 VGEAEHALRWLTR---------RSECLIVLGGNPWIMPPEGVVEKGLPAVESYLLDVRKAEEAGAEVKTLKLLKVVLVGSSQAGKTSLVNSIVEGRGLPTVGTPAEVSTVGIELLRHNLQGTAVEFYDCAGQVDYYGMHQNFLTRRALYLLVWDVLRCHGKTDDDLDEVIFQDIMRWLYVLHLRAPGSTVILVANKCDGSIEDFTGTAAVVEERVAVLRKEWRKARGFSSTRMDMDMTV---LERSSLVSCLDGVGLQEMIDRIAAQSAASMRVPPAWGLALTFLDALRDSRDPQQACRDCLSLGSRPKVGADREPGRSFFTENSLVEQWKGVVQNVEGELRSDAEKMAVSDPDGAIEGALWISEFAGQVLRVANGDGVFLDVVWLSTALKPILDHKLVHKVFPQHFAGMRNELVHNGILRIAFAE-HLWSDVMEITVPEEVLDALCRVIVNLGVALPLEPASLL-PGSGRALATGRPN-ISRQDMLVIMRLPETCGAEHELQELISDQMRRH--SDREVT-------LMWRFDSAGPPYGLVERVIASCHAVGVVEMGLCWRYGAVFQSRAMATSDGSD-RLYTFVVRYDSAVGNERRILSMRMFGPLQDNRVWAALRWVASSVVNISKDWPGVLWEGWPQCARRHRNRTYFATSDKASIGDFLLADAATGATRRGCDCLAVEGTVLRLVLERLGKVVDTQAPPASDVEGVRRT 850
BLAST of mRNA_A-nodosum_M_contig1038.21.1 vs. uniprot
Match: D7FVX5_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVX5_ECTSI) HSP 1 Score: 490 bits (1261), Expect = 6.810e-150 Identity = 303/733 (41.34%), Postives = 395/733 (53.89%), Query Frame = 1
Query: 574 SDLGDVQHALELVSKFDSDGRYYSPSGKMLYLKDNPWKMPPEAVVEQGLEAIKIFLGDVRKARENGAQVRSLKHLKVVLVGSASAGKTSLMESIIKGTKSPTEGTLEEASTVGIDLR-HHLLQGTKVEFYDCAGQVDYAGMHQTFLTRRALYLLLWDVTLFHGLDPRYLEKAVYRNIMRWLYTLHLRAPGATMILVANKCDGSLADFAESTERVKILVDRLLKEWQSRRSSNHRNGGDVTVVRLLDGISRTSCVDYGGIDELVERFSKESATSIQVPPAWDLALEVLDDLRAGGDPLQAARAHLCLKETKGTNKKVINTFRTKNQLLKLWEDIVRQVSEELQSAKDMAAVSNWENALDGALWINEFAGQILRIDRDEGIFLDVVWLSKVLSPILSHKLHAEDFPTI------------------------DLKRQGYPSS----SRCS---------PVGFCTTHLERCPDPCRT-GIKGKIDVN*IYFPCSPQAWRDPSPGTAGLFVRPQRVARVTWRRRI*RYVGNHASGRGM*R*TAKSY*FFCRECTPGLSGVKLKWECDAAQSPYGLVERLISSCNVIGEVEQDLCWRYGALFTSPEMIWGDDRQVR-LYKFLISYDN------RMLSLRIIGLFSDDRVLAALRYVASAMVVLSMEWPGVQWEGWLDCLNHPQARIYLTPPGETRIGGPLL-DQGAYAHSMMCDCRREADGVLRLVRQRLGTVVDTR 2631
S LG + AL+ V++ SG+ L L+DNPW MPPE +V +GL A++ +L DVR+A E GA+V++L LKVVL+GS AGKTSL+ SI+ S T GT EE STVGI+LR HH G VEFYDCAGQVDY GMHQTFLTRRALYLL+WDV+ HG + L+K V +IM+WLY LHLR PG+ ++LVANKCDGSL +F + V+ R L+EWQ R S VT + +L S SC D GG+ E++ R + ATSI VPP+W LAL LD LR DP A R L L ++F T++ L + W D V+ V+ EL S + AVS+ A++GALWI+EFAG ILR+ + IFLDVVWLS L PILSHKL + FP DL+ + PS + C P+G H DP G G+ D+ + P + G VR R+ GN V LKW D A + +GLVER+I+SC+ +G V LCWRYGA+F S DD + LY F+I YD R+L++ + G ++DR+ AALR+VAS++V S WPGV+WEG C H + R+Y P E RIG P+L D +CDC +RLV +RLGT++DT+
Sbjct: 316 SALGQAEQALQFVARLGQ-----LASGQNLRLQDNPWVMPPEGIVNEGLPAVEKYLRDVREAEEAGAEVKTLNVLKVVLIGSPGAGKTSLLNSIVNERGSRTVGTSEEVSTVGIELRRHHQRNGRIVEFYDCAGQVDYYGMHQTFLTRRALYLLVWDVSRCHGKESNDLDKVVSEDIMKWLYALHLRVPGSAVLLVANKCDGSLQEFVGTAGAVESSARRQLQEWQGNRKSP-----GVTKLTILQQPSLVSCDDGGGLSEVIARVDAQGATSIVVPPSWGLALAFLDALRDSRDPEPATRRFLHLDFDAEVGAAQGSSFMTESTLFQRWNDTVKSVAGELTSPAERMAVSDHHGAMEGALWISEFAGHILRVAHSDVIFLDVVWLSAALKPILSHKLESHFFPRSELTAMKDELVDNGVLRLKFAEYLWDLEMEAPPSEEVMDALCGVLHSLGVALPLGREERHTASAIDPAAAHGQIGRQDM--LVIMRLPDTCEENIQGELQELVRDLSE----------RHGGNE---------------------------VTLKWRFDGAGASHGLVERVIASCHEVGSVRSGLCWRYGAVFQSYAR--ADDGGLNWLYSFVIRYDEEVGSGERVLAVTMFGPTAEDRLWAALRWVASSVVNTSTGWPGVRWEGGPACAIHARGRMYFKTPIEARIGDPILTDPDPRTAPNVCDCYTTEGNAMRLVLERLGTIIDTQ 997
BLAST of mRNA_A-nodosum_M_contig1038.21.1 vs. uniprot
Match: A0A6H5L650_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L650_9PHAE) HSP 1 Score: 195 bits (495), Expect = 7.440e-48 Identity = 187/689 (27.14%), Postives = 294/689 (42.67%), Query Frame = 1
Query: 649 SGKMLYLKDNPWKMPPEAVVEQGLEAIKIFLGDVRKARENGAQVRSLKHLKVVLVGSASAGKTSLMESIIKGTKSPTEGTLEEASTVGIDLRHHLLQGTKVEFYDCAGQVDYAGMHQTFLTRRALYLLLWDVTLFHGL-----------DPRYLEKAVYRNIMRWLYTLHLRAPGATMILVANKCDGSLADFAESTERVKILVDRLLKEWQSRRSSNHRNGGDVTVVRLLDGISRTSCVDYGGIDE---------------------------------LVERFSKESATSIQV--PPAWDLALEVLDDLRAGGDP-----LQAARAHLCLKETKGTNKKVINTFRTKNQLLKLWEDIVRQVSEELQSAKDMAAVSNWENALDGALWINEFAGQILRIDRDEGIFLDVVWLSKVLSPILSHKLHAEDFPTIDLKRQG-----------YPSSSRCSPVGFCTTHLERC--PDPCRTGIKGKIDVN*IYFPCSPQAWRDPSPGTAGLF-VRPQRVARVTWRRRI*RYVGNHASGRGM*R*TAKSY*FFCRECTPGLSGVKLKWECDAAQSPYGLVERLISSCNVIGEVEQDLCWRYGALFTSPEMIWGDDRQVRLYKFLISYDNRMLSLRIIGLFSDDRVLAALRYVASAMVVLSMEWPGVQWEGWLDCLNHPQARIYL---TPPGETRI 2511
+G+ L L NPW PPE++V +GL++++ + D+ + +++ + +KVVLVG AGKTSL +S+ K K+ G +E STV D+ L+G+ V YDCAGQV Y G+ Q FLT R++ +L+ + F D R LE + WL ++ R PG +ILVA KCD + E+ +R++ L W RNG D VRL +S TSC G + LV + + +Q+ P +WD+AL LD L G P L++ + ET G V T +L W+ V ++ + V+N ENAL+GAL I EF G + + ++ +FLDVVWL+++L P+L+HK ++L G S R G L PD + + + FP DP+ G L ++P R V + FC TP + W+ P G VE++++ C +G V+ WRYG L + + R + S DN +++ ++ G S A+ YV SA+ ++ +++PG++W+G L C H +++ +PP R+
Sbjct: 129 AGRHLSLNSNPWAEPPESIVAKGLKSVRGYFEDLFA---DHCRIKR-RGVKVVLVGQEGAGKTSLRQSM-KANKATPTGEWKEESTVFADVEPMKLEGSSVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNAGEFRQQLGSDNIDQVEEDCRKLEGL---RVCDWLRSISCRVPGNDVILVATKCDLVNGNVEETGQRIEHACRTWLSSWV-------RNGMDS--VRLERHVSLTSCFPIGASEHGESRRGNHALKQGWACDWRDVEGDMSSPSLLYRLVNKPDQGGLRGVQMVLPRSWDVALTFLDSLEYGRHPVEMVMLKSPDSDSGATETAGGTTTVYQGI-TVEELSARWQGTVDELG------RRGITVTNAENALEGALSIREFDGSL--VCHEKFVFLDVVWLARILKPLLNHKDQEMFDGRVNLGDTGDTRITLDDPSDIASWDRLKNEGVLEPRLADAIWPDGLSEYVLPTLASLGLIFPLE----NDPAEGLVVLLRLKPHRPESV-----------------------GEVIDTFCSGLTPAF---RASWKVFLGVPP-GAVEKVLTRCCALGGVQT--FWRYGVLVHGGLGVQDERRTFAVVVEYSSTDNELVA-QVFGDISRPGPWMAMSYVMSAVSLMLVDFPGLRWKGSLKCPQHGDGMLFVNKVSPPHAYRL 757
BLAST of mRNA_A-nodosum_M_contig1038.21.1 vs. uniprot
Match: D7FL98_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL98_ECTSI) HSP 1 Score: 198 bits (504), Expect = 7.700e-48 Identity = 187/690 (27.10%), Postives = 296/690 (42.90%), Query Frame = 1
Query: 673 DNPWKMPPEAVVEQGLEAIKIFLGDVRKARENGAQVRSLKHLKVVLVGSASAGKTSLMESIIKGTKSPTEGTLEEASTVGIDLRHHLLQGTKVEFYDCAGQVDYAGMHQTFLTRRALYLLLWDVTLFHGLD---------PRYLEKAVYRNIMRWLYTLHLRAPGATMILVANKCDGSLADFAESTERVKILVDRLLKEWQSRRSSNHRNGGDVTVVRLLDGISRTSCV-----DYGGI--------DE-------------------LVERFSKES-----ATSIQVPPAWDLALEVLDDLRAGGDPLQAARAH-LCLKETKGTNKKVINTFR--------TKNQLLKLWEDIVRQVSEELQSAKDMAAVSNWENALDGALWINEFAGQILRIDRDEGIFLDVVWLSKVLSPILSHKLHAEDF--------PTIDLKRQGYPSS-SRCSPVGFCTTHLERC--PDPCRTGIKGKIDVN*IYFPCSPQAWRDPSPGTAGLF----VRPQRVARVTWRRRI*RYVGNHASGRGM*R*TAKSY*FFCRECTPGLSGVKLKWECDAAQSPYGLVERLISSCNVIGEVEQDLCWRYGALFTSPEMIWGDDRQVRLYKFLISY--DNRMLSLRIIGLFSDDRVLAALRYVASAMVVLSMEWPGVQWEGWLDCLNHPQARIY---LTPPGETRIGG 2517
+NPW+ PPEAVV +G+ A++ + D+ G K +KVVLVG AGKTSL +S+ G +PT G+ E STV ID+ + G + YDCAGQV Y G+ Q FL+ RA+ LL+ D+ F D + L K + WL +L R P + +++VA KCD + ++ R++ + L+ W +G + V + DG+S TSC + GG DE L+ R S S+ +P +W++ALEVLD L +G +P+++A+ + L KG + V ++ T+ L W ++V + D +V ++AL+GAL I E G ++R + +FLDV WL+++L P+L+H+ + I LK + +S +R G L R PD + +D + +P DP+ G L RP+ V K F R+ T LS +KW+ P G +E++++ C +G + WR+G L G R + ++ Y D + +++ G S AAL + S + E+PG++W L C H Q T PG+ + G
Sbjct: 247 ENPWQEPPEAVVSKGISAVQEYFTDLFA---EGIAPVGRKMIKVVLVGQEGAGKTSLRQSLRTGRPTPTSGS--EESTVQIDVEQMDVNGVTLRVYDCAGQVAYTGLLQMFLSPRAVSLLVCDLGAFGQRDGTLIHSDQLKKDLSKLQELRVCDWLRSLSFRIPDSDVVVVATKCDLAAGMGTDAAGRIEGAIGEWLESW---------SGAGMNAVHVEDGVSLTSCFPPTPNEDGGAALGKRKSPDEDSTWACDWREGVSVESQPSLLHRVMYNSKGNVRGASLVLPRSWNIALEVLDALGSGRNPVESAQQNVLASGGPKGATEVVPAVYQRNQGVGGLTRADLSTKWNEVVAALE------GDGVSVVKPDHALEGALLIREHEGSLVR--HETYVFLDVTWLAQILKPLLNHRDDEDPLRGDVSLGDTGITLKEDKHIASWNRLKGHGVLEPSLARVLWPDGLSNYVLPALDSLGLTYPLDD----DPAEGLVVLLRLDEKRPEDVG--------------------------KELDDFRRDHTAVLS---VKWKVFLGVPP-GAIEKMLTRCCRLGTLRT--FWRFGVLVQGS---LGGGIAARTFALVVEYSHDKCEVDMKVYGSISTAAPWAALSFGISVFQAMCSEFPGLRWRAALKCPQHEQDMQISKAATRPGDKSLFG 875
BLAST of mRNA_A-nodosum_M_contig1038.21.1 vs. uniprot
Match: D8LJS7_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJS7_ECTSI) HSP 1 Score: 198 bits (504), Expect = 8.060e-48 Identity = 189/705 (26.81%), Postives = 299/705 (42.41%), Query Frame = 1
Query: 601 LELVSKFDSDGRYYSPSGKMLYLKDNPWKMPPEAVVEQGLEAIKIFLGDVRKARENGAQVRSLKHLKVVLVGSASAGKTSLMESIIKGTKSPTEGTLEEASTVGIDLRHHLLQGTKVEFYDCAGQVDYAGMHQTFLTRRALYLLLWDVTLFHGL-----------DPRYLEKAVYRNIMRWLYTLHLRAPGATMILVANKCDGSLADFAESTERVKILVDRLLKEWQSRRSSNHRNGGDVTVVRLLDGISRTSCV--------------------------DYGG-------IDELVERFSKESATSIQV--PPAWDLALEVLDDLRAGGDPLQAA--RAHLCLKETKGTNKKVINTFRTKNQLLKLWEDIVRQVSEELQSAKDMAAVSNWENALDGALWINEFAGQILRIDRDEGIFLDVVWLSKVLSPILSHKLHAEDFPTIDLKRQG-----------YPSSSRCSPVGFCTTHLERC--PDPCRTGIKGKIDVN*IYFPCSPQAWRDPSPGTAGLF-VRPQRVARVTWRRRI*RYVGNHASGRGM*R*TAKSY*FFCRECTPGLSGVKLKWECDAAQSPYGLVERLISSCNVIGEVEQDLCWRYGALFTSPEMIWGDDRQVRLYKFLISYDNRMLSLRIIGLFSDDRVLAALRYVASAMVVLSMEWPGVQWEGWLDCLNHPQARIYLTPPGETRIGGPLLD 2529
L++ ++ G + G L L +NPW PPE++V +G ++I+ + D+ +++ + +KVVLVG AGKTSL +S+ K K+ G +E STV D+ L+G+ V YDCAGQV Y G+ Q FLT R++ +L+ + F D R LE + WL ++ R P +ILVA KCD + + E R++ R L W R ++ VRL G+ TSC D GG I LV + K +Q+ P +WD+AL LD L G DP++ ++ + T K + T +L W++ V + + V+N ENAL+GAL I EF G + + ++ +FLDVVWL+++L P+L+HK ++L G S R G L P+ + + + FP DP+ G L ++P R V K FC TP + W+ P G +E++++ C +G V+ WRYG L + + R + S DN +++ +I G S A YV SA+ ++ +++PG+ W+G+L+C H +++ TR G L+
Sbjct: 284 LDIFDSVEAQGLNDTGIGPSLSLSENPWAEPPESIVAKGPKSIRGYFEDLYAEH---CRIKR-RGVKVVLVGQEGAGKTSLRQSM-KANKATLTGEWKENSTVLADVESMELEGSSVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNAGEFGEQLGSDNIDQVEEDCRKLEAL---RVCNWLRSISRRVPDTEVILVATKCDLAGGNAWEIGRRMEKACRRWLSSWACR---------NMLSVRLEPGVCLTSCFPVGAGEHGESSSENFLSKSCWACDWRDVGGGEPSPSLIYRLVNKPDKGGLRGVQMVLPRSWDIALTFLDSLEHGRDPVEMVILKSPDSDRGATETAKTTVYQGITVEELSAKWQETVDGLG------RRGITVTNAENALEGALSIREFDGSL--VPHEKFVFLDVVWLARILKPLLNHKDQEMFDGRVNLGDTGDTRITLDDSADIASWDRLKKEGVLEPRLAYAIWPNGLSEYVLPTLASLGLIFPLE----NDPAEGLVVLLRLKPHRPESV-----------------------GKVIDTFCSGLTPAF---RASWKIFLGVPP-GAIEKVLTRCCGLGGVQT--FWRYGVLVHGGLGVQDERRTFAVVVEYSSTDNELIA-QIFGDVSTPGPWGATSYVMSAVSLMLVDFPGLGWKGYLECPQHGDGMLFVNKA--TRDGDKFLE 927
BLAST of mRNA_A-nodosum_M_contig1038.21.1 vs. uniprot
Match: D7FZA1_ECTSI (LRR-GTPase of the ROCO family, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZA1_ECTSI) HSP 1 Score: 194 bits (494), Expect = 6.500e-47 Identity = 197/681 (28.93%), Postives = 287/681 (42.14%), Query Frame = 1
Query: 649 SGKMLYLKDNPWKMPPEAVVEQGLEAIKIFLGDVRKARENGAQVRSLKH--LKVVLVGSASAGKTSLMESIIKGTKSPTEGTLEEASTVGIDLRHHLLQGTKVEFYDCAGQVDYAGMHQTFLTRRALYLLLWDVTLFH---GLD-----PRYLEKAVYRNIMRWLYTLHLRAPGATMILVANKCDGSLADFAESTERVKILVDRLLKEWQSRRSSNHRNGGDVTVVRLLDGISRTSCVDYG---------GID------------------------ELVERFSKESATSIQV--PPAWDLALEVLDDLRAGGDPLQAARAHLCLKETKGTNKKVINTFRTKNQLLKL------WEDIVRQVSEELQSAKDMAAVSNWENALDGALWINEFAGQILRIDRDEGIFLDVVWLSKVLSPILSHKLHAEDFPTIDLKRQG-----------YPSSSRCSPVGFCTTHLERC--PDPCRTGIKGKIDVN*IYFPCSPQAWRDPSPGTAGLF-VRPQRVARVTWRRRI*RYVGNHASGRGM*R*TAKSY*FFCRECTPGLSGVKLKWECDAAQSPYGLVERLISSCNVIGEVEQDLCWRYGALFTSPEMIWGDDRQVRLYKFLISYD--NRMLSLRIIGLFSDDRVLAALRYVASAMVVLSMEWPGVQWEGWLDCLNHPQARIYLT 2490
SG L L NPW PPE++V +G ++I+ + D+ A+ +K +KVVLVG AGKTSL +S+ K K+ G +E STV D+ L+G+ V YDCAGQV Y G+ Q FLT R++ +L+ + F G D K + WL ++ R PG +ILVA KCD + E+ R++ L W RNG D VRL +S TSC G G D LV + + +Q+ P +WD+AL VL+ L G DP++ E + T V T Q +K+ W + V ++ K V+N ENAL+GAL I EF G ++R ++ +FLDVVWL+++L P+L+HK ++L G S R G L PD + + + FP DP G L + P R A V ++ FC + TP S WE P G +E++++ C +G+V+ WRYG L GD ++ + Y N L+ +I G S AL YV SA+ ++ M++PG++W G L C H + T
Sbjct: 80 SGVNLALLGNPWAEPPESIVAKGPKSIRGYFEDLY------AEPCWIKRSSVKVVLVGQEGAGKTSLRQSM-KANKATPTGEWKEESTVFADVEPMELEGSSVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNAGEFGQQLGSDNVDQVEEDCRKLQALRVCDWLRSISRRVPGNDVILVATKCDLVSGNAEETGRRLEHACRMWLSTWV-------RNGMDP--VRLEPHVSLTSCFPIGDGEHGESNTGSDASKQGWACDWRHVEGDKSSPSLLYRLVNKPDEGGLRGVQMVLPRSWDIALTVLEALEHGRDPVEMVLLKSPDSERRPTETGVGKT--NVYQAIKVEELGTNWRETVDELG------KRGIVVTNAENALEGALSIREFDGSLVR--HEKFVFLDVVWLARILKPLLNHKDQRTFDGRVNLGDTGDARITLDDSSDIASWGRLKNEGVLEPRLAYAMWPDGLSEYVLPTLASLGLTFPLE----GDPDNGLVVLLRLEPNRPASV-----------------------GEAIDTFCSKYTPAFSA---SWEIFLGVPP-GAIEKVLTRCCGLGDVQT--FWRYGVLVHGG---LGDLDGRGIFAVVTEYSSTNNELTAQIFGDISTSAPWVALSYVTSAVSLMLMDFPGLRWNGSLKCPQHGYEMPFAT 698
BLAST of mRNA_A-nodosum_M_contig1038.21.1 vs. uniprot
Match: D7FUC9_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUC9_ECTSI) HSP 1 Score: 184 bits (468), Expect = 1.230e-43 Identity = 198/735 (26.94%), Postives = 303/735 (41.22%), Query Frame = 1
Query: 649 SGKMLYLKDNPWKMPPEAVVEQGLEAIKIFLGDVRKARENGAQVRSLKHLKVVLVGSASAGKTSLMESIIKGTKSPTEGTLEEASTVGIDLRHHLLQGTKVEFYDCAGQVDYAGMHQTFLTRRALYLLLWDVTLFHGL-----------DPRYLEKAVYRNIMRWLYTLHLRAPGATMILVANKCDGSLADFAESTERVKILVDRLLKEWQSRRSSNHRNGGDVTVVRLLDGISRTSCVDYGGIDELVERFSKESA------------------------------------TSIQVPPAWDLALEVLDDLRAGGDPLQAARAHLC---LKETKGTNKKVINTFR--TKNQLLKLWEDIVRQVSEELQSAKDMAAVSNWENALDGALWINEFAGQILRIDRDEGIFLDVVWLSKVLSPILSHKLHAEDFPTIDLKRQG-----------YPSSSRCSPVGFCTTHLERC--PDPCRTGIKGKIDVN*IYFPCSPQAWRDPSPGTAGLF-VRPQRVARVTWRRRI*RYVGNHASGRGM*R*TAKSY*FFCRECTPGLSGVKLKWECDAAQSPYGLVERLISSCNVIGEVEQDLCWRYGALFTSPEMIWGDDRQVRLYKFLISY---DNRMLSLRIIGLFSDDRVLAALRYVASAMVVLSMEWPGVQWEGWLDCLNHPQARIY-----------LTPPGETRIGGPLLDQGAYAHSM--MCDCRREADGVLRLVRQR 2607
+G +L L DNPW PP ++V +G +I+ + D+ + Q S+K ++LVG AGKTSL +S+ PT G +E STV D+ L+G+ V YDCAGQV Y G+ Q FLT R++ +L+ + F D R LE+ + WL ++ R P +ILVA KCD + E R++ L W + VRL G+ TSC + E E+ + +A T + +P +WD+AL VL+ L G DP++ HL ++ T + ++ T L W++ V + A+ V+N +NAL+GAL I EF G ++R + +FLDVVWL+++L P+L+HK ++L G S R G L R P+ + + + FP DP+ G L + P R RV K FC + TP S W+ P G +E++++ C +G V+ WR G L GD+ ++ ++ Y DN L+ +I G S AL YV SA+ ++ +++PG++ G L C H A + L P G + GA A + M D R + D + R V+QR
Sbjct: 193 TGGILGLDDNPWAEPPASIVSKGPTSIRGYFEDLY-VESSRVQRNSVK---IILVGQEGAGKTSLRQSMKANAAIPT-GEWKEESTVFADVEPMQLEGSFVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNAEAFGQQRGDDTGGQVKEDCRKLEEL---RVCDWLRSVSRRVPNNDVILVATKCDLVGGNAEEFGRRIEQATRTWLASWVH---------DGMQPVRLEPGVCLTSCC-ASAVGENGEKSTGHNASERGWACDWRDDRDDMPPPGLVHRLVNKPDGSGLRGTQMVLPRSWDIALTVLEALERGRDPVEVVVEHLAEPDREDATRTAARQTGVYQGITVEALRVKWQEAV------VGLARRGVNVTNAKNALEGALSIREFDGSLVR--HEMFVFLDVVWLARILKPLLNHKDEETFDGLVNLGDTGDTRVTLEDPLDIASWGRLKNQGVLEPRLARTMWPNGLSKYVLPTLASLGLTFPLK----NDPAGGLVVLLRLNPDRPERV-----------------------GKVIDTFCLDQTPAFS---TSWKIFLGV-PAGAIEKVLTRCCSLGGVQT--FWRSGVLVHGG---LGDEDGHEIFAVVLEYSSSDNE-LTAQIFGDISTPAPWVALSYVISAVRLMLLDFPGLRSRGSLKCPQHGDAMLLVNKMTQAGVKLLEPSGCPQCSPDTRGLGAAAIDLVSMVDIRLDRDVIFRDVKQR 864
BLAST of mRNA_A-nodosum_M_contig1038.21.1 vs. uniprot
Match: A0A6H5KSZ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSZ8_9PHAE) HSP 1 Score: 184 bits (466), Expect = 1.360e-43 Identity = 200/711 (28.13%), Postives = 299/711 (42.05%), Query Frame = 1
Query: 661 LYLKDNPWKMPPEAVVEQGLEAIKIFLGDVRKARENGAQVRSLKHLKVVLVGSASAGKTSLMESIIKGTKSPTEGTLEEASTVGIDLRHHLLQGTKVEFYDCAGQVDYAGMHQTFLTRRALYLLLWDVTLFH-----------GLDPRYLEKAVYRNIMRWLYTLHLRAPGATMILVANKCDGSLADFAESTERVKILVDRLLKEWQSRRSSNHRNGGDVTVVRLLDGISRTSCVDYG---------GIDELVERFSKE--------------------------SATSIQVPPAWDLALEVLDDLRAGGDPLQAARAHLCLKETKGTNKKVINTFRTKNQLLK--LWEDIVRQVSEELQSA-KDMAAVSNWENALDGALWINEFAGQILRIDRDEGIFLDVVWLSKVLSPILSHKLHAEDFPTIDLKRQG-----------YPSSSRCSPVGFCTTHLERC--PDPCRTGIKGKIDVN*IYFPCSPQAWRDPSPGTAGLF-VRPQRVARVTWRRRI*RYVGNHASGRGM*R*TAKSY*FFCRECTPGLSGVKLKWECDAAQSPYGLVERLISSCNVIGEVEQDLCWRYGALFTSPEMIWGDDRQVR-----LYKFLISY---DNRMLSLRIIGLFSDDRVLAALRYVASAMVVLSMEWPGVQWEGWLDCLNHPQARIYLTPPGETRIGGPLLDQGAYAHSM--MCDCRRE 2574
L L NPW PPE +V +G +A++ + D+ E RS+ +KVVLVG AGKTSL +S+ +PT G +E STV D+ L+G+ V YDCAGQV Y G+ Q FLT RA+ +L+ + F G D R LE+ + WL ++ R P +ILVA KCD + + + R++ R L W RNG + VRL +S TSC + G G EL ++ + T + +P +WD+AL VL+ L G DP++ + K T R + + + ED+ + E + + V+N +NAL+GAL I EF G ++R ++ IFLDVVWL+K+L P+L+HK + L G S R G L P+ + + + FP DP+ G L ++P R V HA FC + TP LS W+ P G +E++++ C +G V WRYG L + G +V ++ ++ Y DN L+ +I G S L YV SA+ ++ +++PG++W G L C H + P+ GA A + M D RR+
Sbjct: 153 LKLGTNPWVEPPEPIVVKGPKAVRGYFEDLYA--EPCRIKRSI--VKVVLVGQEGAGKTSLRQSMKANEATPT-GEWKEESTVFADVEAMELEGSSVRVYDCAGQVAYTGLLQMFLTPRAVCVLVCNAGKFGQQTRSESNDQVGEDCRKLEEL---RVCDWLRSISRRVPNNDVILVATKCDLAGGNAGKIGARMEHACRRWLSSWV-------RNG--LQPVRLEPCVSLTSCFETGVGEHGESSTGSHELKGGWACDWRDMADGNPSPSLLHRLVNKPDGRGLRGTQMVLPRSWDIALTVLEALEHGRDPVEV----VLRKSPDPDRGDATETARGETAMYQGITVEDLSIKWQETVDGLERSGVTVTNAKNALEGALLIREFDGSLIRYEKF--IFLDVVWLAKILKPLLNHKDQETFDGLVSLGDTGDARITLDDPSDIASWGRLKSQGVLEPRLAYAIWPNGLSEYVLPALAFLGLTFPLED----DPAKGLVVLLRLKPDRPESV-----------GHAIDT------------FCLDHTPALSA---SWKIFLGVPP-GAIEKVLTRCCGLGGVRT--FWRYGVL------VHGGLGEVHVGRRGIFAVVLEYSSTDNE-LAAQIFGDISTPAPWVVLSYVMSAVSLMLLDFPGLRWRGSLTCPQHGDTMLLANK------ASPVAGLGAAAIDLVRMVDIRRD 794
BLAST of mRNA_A-nodosum_M_contig1038.21.1 vs. uniprot
Match: D7G431_ECTSI (LRR-GTPase of the ROCO family, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G431_ECTSI) HSP 1 Score: 179 bits (454), Expect = 5.350e-42 Identity = 192/683 (28.11%), Postives = 288/683 (42.17%), Query Frame = 1
Query: 661 LYLKDNPWKMPPEAVVEQGLEAIKIFLGDVRKARENGAQVRSLKHLKVVLVGSASAGKTSLMESIIKGTKSPTEGTLEEASTVGIDLRHHLLQGTKVEFYDCAGQVDYAGMHQTFLTRRALYLLLWDVTLFHGL-----------DPRYLEKAVYRNIMRWLYTLHLRAPGATMILVANKCDGSLADFAESTERVKILVDRLLKEWQSRRSSNHRNGGDVTVVRLLDGISRTSCVDYGG---------------------------------IDELVERFSKESATSIQV--PPAWDLALEVLDDLRAGGDPLQAA-RAHLC-----LKETKGTNKKVINTFRTKNQLLKLWEDIVRQVSEELQSAKDMAAVSNWENALDGALWINEFAGQILRIDRDEGIFLDVVWLSKVLSPILSHKLHAEDFPTIDLKRQGYPSSSRCSPVGFCTTHLERCPDPCRTGIKGKIDVN*IYFPCSPQA-WRDPSPGTAGLFVRPQRVAR-VTWRRR---------I*RYVGNHASGRGM*R*TAKSY*FFCRECTPGLSGVKLKWECDAAQSPYGLVERLISSCNVIGEVEQDLCWRYGALFTSPEMIWGDDRQVRLYKFLISYDN--RMLSLRIIGLFSDDRVLAALRYVASAMVVLSMEWPGVQWEGWLDCLNHPQARIY---LTPPGET 2505
+ L NPW PPE++V++G ++++ + D+ ++ + KVVLVG AGK+SL +S+ +PT G +E STV D+ L+G+ V YDCAGQV Y G+ Q FLT R++ +L+ + F D R LE+ + WL ++ R P +ILV KCD + + AE ERV+ L W R+G + V+L G+S TSC G + LV + Q+ P +WD L VLD L G DP++ R L ET G N V T L K W+ IV ++ + V+N +NAL+GAL I EF G ++R + +FLDV+WL+++L P+L+HK D T D G L+ DP G++ + P A W PG +V P + +T+ + R G T FC TP LS W P G +E++++ C +G V+ WRYG L GD ++ ++ Y + L+ +I G AL YV SA+ ++ +++PG++W G L C H A + +T GET
Sbjct: 103 IVLDGNPWAEPPESIVDKGRKSMRSYFEDLYAEPCRIERIST----KVVLVGQEGAGKSSLRQSMKANEPTPT-GEWKEESTVFADVEPMELEGSSVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNAAAFGQQLERKNSGEVEEDCRKLEEL---RVCDWLRSISRRVPHNDVILVVTKCDLAGGNAAEIGERVEHACRTWLSSWV-------RHG--MQPVQLEPGVSFTSCFPAEGGQHGEVGTENHGSKGDWACDWHDMKDDHPPPSLLHRLVNKPDGGGLRGAQMVLPRSWDTVLIVLDSLEQGRDPVEVVLRKSLHPDRGDATETAGGNTVVYQGI-TVEDLSKKWQKIVDELE------RRGIIVTNAKNALEGALSIREFDGSLVR--HETFVFLDVLWLARILKPLLNHK----DQETFD-------GRVNLGDTGDARITLD---DPLYIASWGRLKNEGVLEPRLAYAMW----PGGLSEYVLPTLASLGLTFPLEGDLDEGQVVLLRLKPERPDSVGEVIDT------FCSRHTPALSA---SWNIFLGVPP-GAIEKVLTRCCGLGAVQT--FWRYGVLVHGG---LGDLGGRGIFAVVLEYSSTDHKLNGQIFGDIGTPAPWVALSYVMSAVSLMLVDFPGLRWGGALKCPQHGDAMLMANKVTQAGET 726 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1038.21.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1038.21.1 >prot_A-nodosum_M_contig1038.21.1 ID=prot_A-nodosum_M_contig1038.21.1|Name=mRNA_A-nodosum_M_contig1038.21.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=530bp MEKLDLSGNQLSGTNLPALRGLSALGYLCLSGNQLSGAIPSELGESSTLKback to top mRNA from alignment at A-nodosum_M_contig1038:110655..124126+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig1038.21.1 ID=mRNA_A-nodosum_M_contig1038.21.1|Name=mRNA_A-nodosum_M_contig1038.21.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=13472bp|location=Sequence derived from alignment at A-nodosum_M_contig1038:110655..124126+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig1038:110655..124126+ >mRNA_A-nodosum_M_contig1038.21.1 ID=mRNA_A-nodosum_M_contig1038.21.1|Name=mRNA_A-nodosum_M_contig1038.21.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1590bp|location=Sequence derived from alignment at A-nodosum_M_contig1038:110655..124126+ (Ascophyllum nodosum dioecious)back to top |