mRNA_A-nodosum_M_contig1036.40.1 (mRNA) Ascophyllum nodosum dioecious
|
Overview
Homology
BLAST of mRNA_A-nodosum_M_contig1036.40.1 vs. uniprot
Match: D8LCQ2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCQ2_ECTSI) HSP 1 Score: 218 bits (555), Expect = 1.460e-64 Identity = 104/127 (81.89%), Postives = 115/127 (90.55%), Query Frame = 1
Query: 55 HGHGDVHHLLFREGIAEDLHRRGFQWLFFFQDTNALVLNSFLPALGVSSTKGYDMNSLCVPRKAKEAAGGITALTREDGSSLIINVEYNQLDPILRATISPEGDVNDPETGLSLFPGNINNIVFKLD 435
HGHGDVHHLL REG+AE L GF+WLFFFQDTNALVLNS LPALGVS++KGY MNS+CVPRKAKEAAG ITALT++DG+SLIINVEYNQLDPILRAT+SPEGDVNDP TGLS FPGN NN+VF L+
Sbjct: 329 HGHGDVHHLLLREGVAEKLKGGGFEWLFFFQDTNALVLNSLLPALGVSASKGYHMNSICVPRKAKEAAGAITALTKDDGTSLIINVEYNQLDPILRATVSPEGDVNDPNTGLSPFPGNTNNLVFMLE 455
BLAST of mRNA_A-nodosum_M_contig1036.40.1 vs. uniprot
Match: A0A836CDZ7_9STRA (Nucleotide-diphospho-sugar transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDZ7_9STRA) HSP 1 Score: 202 bits (513), Expect = 5.690e-58 Identity = 101/135 (74.81%), Postives = 111/135 (82.22%), Query Frame = 1
Query: 55 HGHGDVHHLLFREGIAEDLHRRGFQWLFFFQDTNALVLNSFLPALGVSSTKGYDMNSLCVPRKAKEAAGGITA---------LTREDGSSLIINVEYNQLDPILRATISPEGDVNDPETGLSLFPGNINNIVFKL 432
HGHGDVHHLL R GIAEDL RGF++L FFQDTNALVLNS LP LGVS+TKGY MNS+CVPRKA+EAAG + A LT DGSSLIINVEYNQLDP+LRAT+SPEGDVNDPETG S +PGN NNIVF+L
Sbjct: 297 HGHGDVHHLLHRSGIAEDLKSRGFKYLVFFQDTNALVLNSILPTLGVSATKGYAMNSICVPRKAQEAAGAVVAXXXXXXXXALTHTDGSSLIINVEYNQLDPLLRATVSPEGDVNDPETGFSPYPGNTNNIVFEL 431
BLAST of mRNA_A-nodosum_M_contig1036.40.1 vs. uniprot
Match: A0A4D9D7Z1_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D7Z1_9STRA) HSP 1 Score: 176 bits (445), Expect = 1.340e-49 Identity = 85/130 (65.38%), Postives = 97/130 (74.62%), Query Frame = 1
Query: 43 DQTSHGHGDVHHLLFREGIAEDLHRRGFQWLFFFQDTNALVLNSFLPALGVSSTKGYDMNSLCVPRKAKEAAGGITALTREDGSSLIINVEYNQLDPILRATISPEGDVNDPETGLSLFPGNINNIVFKL 432
D HGHGDVHHLL R G+ G +W+FF QDTNALV+NS LPAL VS+T GYDMNS+C+PRKA EA+G IT LT +G S+IINVEYNQLDP+LRAT P+GD ND TG S FPGN NNIV L
Sbjct: 171 DTKPHGHGDVHHLLLRSGLTAQWLAAGKKWVFFLQDTNALVVNSVLPALAVSATHGYDMNSICIPRKAGEASGAITKLTTRNGDSIIINVEYNQLDPLLRATTYPDGDTNDQSTGCSPFPGNANNIVMYL 300
BLAST of mRNA_A-nodosum_M_contig1036.40.1 vs. uniprot
Match: W7UBR1_9STRA (UDPglucose pyrophosphorylase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7UBR1_9STRA) HSP 1 Score: 176 bits (446), Expect = 7.550e-49 Identity = 85/130 (65.38%), Postives = 97/130 (74.62%), Query Frame = 1
Query: 43 DQTSHGHGDVHHLLFREGIAEDLHRRGFQWLFFFQDTNALVLNSFLPALGVSSTKGYDMNSLCVPRKAKEAAGGITALTREDGSSLIINVEYNQLDPILRATISPEGDVNDPETGLSLFPGNINNIVFKL 432
D HGHGDVHHLL R G+ G +W+FF QDTNALV+NS LPAL VS+T GYDMNS+C+PRKA EA+G IT LT +G S+IINVEYNQLDP+LRAT P+GD ND TG S FPGN NNIV L
Sbjct: 344 DTKPHGHGDVHHLLLRSGLTAQWLAAGKKWVFFLQDTNALVVNSVLPALAVSATHGYDMNSICIPRKAGEASGAITKLTNRNGDSIIINVEYNQLDPLLRATTYPDGDTNDQSTGCSPFPGNANNIVMYL 473
BLAST of mRNA_A-nodosum_M_contig1036.40.1 vs. uniprot
Match: A0A7S3FGY7_9VIRI (Hypothetical protein (Fragment) n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3FGY7_9VIRI) HSP 1 Score: 167 bits (424), Expect = 5.740e-48 Identity = 80/129 (62.02%), Postives = 99/129 (76.74%), Query Frame = 1
Query: 46 QTSHGHGDVHHLLFREGIAEDLHRRGFQWLFFFQDTNALVLNSFLPALGVSSTKGYDMNSLCVPRKAKEAAGGITALTREDGSSLIINVEYNQLDPILRATISPEGDVNDPETGLSLFPGNINNIVFKL 432
Q HGHGDVH L+ G+A++ ++GF+W+ FFQDTNAL + A+GVS K +D+NS+ VPRKAKEA G IT LT+EDGSS++INVEYNQLDP+LRAT P+GDVND TG S FPGNIN +V KL
Sbjct: 125 QKPHGHGDVHKLIANAGLADEWAKQGFKWISFFQDTNALAFRALPSAIGVSVDKNFDINSMTVPRKAKEAIGAITKLTKEDGSSMVINVEYNQLDPMLRATTYPKGDVNDGATGCSPFPGNINQLVLKL 253
BLAST of mRNA_A-nodosum_M_contig1036.40.1 vs. uniprot
Match: A0A7S2Y4M2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y4M2_9STRA) HSP 1 Score: 170 bits (430), Expect = 4.770e-47 Identity = 88/130 (67.69%), Postives = 102/130 (78.46%), Query Frame = 1
Query: 55 HGHGDVHHLLFREGIAEDLHRR-GFQWLFFFQDTNALVLNSFLPALGVSSTKGYDMNSLCVPRKAKEAAGGITALTREDGSSLIINVEYNQLDPILRATISP--EGDVNDPETGLSLFPGNINNIVFKLD 435
HGHGDVH LL REG+A ++ G +W+FF QDTNALV+NS LPALGVS+ Y MNS+C+PR AKE AG IT LT DG+SLIINVEYNQL P+L+A SP EGDVNDP TGLS +PGN NNIVFK+D
Sbjct: 239 HGHGDVHILLNREGVARAWQQQSGVEWVFFLQDTNALVINSVLPALGVSALNDYHMNSICIPRAAKEEAGAITKLTHSDGTSLIINVEYNQLGPLLQAN-SPTGEGDVNDPATGLSPYPGNANNIVFKMD 367
BLAST of mRNA_A-nodosum_M_contig1036.40.1 vs. uniprot
Match: A0A7R9U1R1_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U1R1_9STRA) HSP 1 Score: 170 bits (430), Expect = 7.710e-47 Identity = 84/130 (64.62%), Postives = 96/130 (73.85%), Query Frame = 1
Query: 55 HGHGDVHHLLFREGIAEDLHRRGFQWLFFFQDTNALVLNSFLPALGVSSTKGYDMNSLCVPRKAKEAAGGITALTRED-GSSLIINVEYNQLDPILRATISPE-GDVNDPETGLSLFPGNINNIVFKLDT 438
HGHGDVHHL+ +E + + R +WLFF QDTN LV+NS LPALGVS + DMNS+C+PR A EAAG IT L +E G L INVEYNQLDP+LRATISPE GD NDPE G S FPGN NN+VFK T
Sbjct: 283 HGHGDVHHLMLKEKVLDQWAERSIKWLFFLQDTNLLVINSILPALGVSKARDLDMNSICIPRTAGEAAGAITRLVKEGTGEELTINVEYNQLDPLLRATISPELGDTNDPELGCSPFPGNANNLVFKFST 412
BLAST of mRNA_A-nodosum_M_contig1036.40.1 vs. uniprot
Match: A0A1Y1IC08_KLENI (UTP--glucose-1-phosphate uridylyltransferase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IC08_KLENI) HSP 1 Score: 167 bits (424), Expect = 4.780e-46 Identity = 76/128 (59.38%), Postives = 99/128 (77.34%), Query Frame = 1
Query: 55 HGHGDVHHLLFREGIAEDLHRRGFQWLFFFQDTNALVLNSFLPALGVSSTKGYDMNSLCVPRKAKEAAGGITALTREDGSSLIINVEYNQLDPILRATISPEGDVNDPETGLSLFPGNINNIVFKLDT 438
HGHGDVH LL+ G+ +D +G +W+ FFQDTN L+ + +LGVS+T+ YD+NSL VPRKAKEA GGIT LT +DG ++INVEYNQLDP+LR++ P+GDVNDP TG S +PGNIN +V KL++
Sbjct: 286 HGHGDVHSLLYSSGLLKDWQAKGVKWILFFQDTNGLIFKAVPSSLGVSATRSYDVNSLAVPRKAKEAIGGITRLTHKDGRKIVINVEYNQLDPMLRSSGYPDGDVNDPSTGFSPYPGNINQLVIKLES 413
BLAST of mRNA_A-nodosum_M_contig1036.40.1 vs. uniprot
Match: A0A804PGL3_MAIZE (Uncharacterized protein n=1 Tax=Zea mays TaxID=4577 RepID=A0A804PGL3_MAIZE) HSP 1 Score: 154 bits (389), Expect = 2.120e-45 Identity = 76/126 (60.32%), Postives = 94/126 (74.60%), Query Frame = 1
Query: 55 HGHGDVHHLLFREGIAEDLHRRGFQWLFFFQDTNALVLNSFLPALGVSSTKGYDMNSLCVPRKAKEAAGGITALTREDGSSLIINVEYNQLDPILRATISPEGDVNDPETGLSLFPGNINNIVFKL 432
HGHGDVH LL+ G+ E G +W+ FFQDTN L+ N+ ALGVS+TKGY++NSL VPRKAKEA GGIT LT DG +++INVEYNQLDP+LRAT P+GD N ETG S +P NIN ++ +L
Sbjct: 5 HGHGDVHSLLYSSGLLEQWKTEGRKWVLFFQDTNGLLFNAIPSALGVSATKGYNVNSLAVPRKAKEAIGGITKLTHVDGRTMVINVEYNQLDPLLRATGHPDGDSNC-ETGYSPYPRNINQLILEL 129
BLAST of mRNA_A-nodosum_M_contig1036.40.1 vs. uniprot
Match: A0A388K0B5_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388K0B5_CHABU) HSP 1 Score: 165 bits (417), Expect = 4.550e-45 Identity = 81/136 (59.56%), Postives = 98/136 (72.06%), Query Frame = 1
Query: 31 LLAGDQTSHGHGDVHHLLFREGIAEDLHRRGFQWLFFFQDTNALVLNSFLPALGVSSTKGYDMNSLCVPRKAKEAAGGITALTREDGSSLIINVEYNQLDPILRATISPEGDVNDPETGLSLFPGNINNIVFKLDT 438
+ A HGHGDVH LL+ G+ G +W+ FFQDTN L+ S +LGVS+T+GYD+NS+ VPRKAKEA GGIT LT DG ++INVEYNQLDP+LRAT PEGDVND E+G S FPGNIN +V KLD+
Sbjct: 268 MFAIQTKPHGHGDVHRLLYTSGLLPKWKTAGLKWVLFFQDTNGLLFKSIPASLGVSATRGYDVNSMAVPRKAKEAIGGITELTHTDGRRMVINVEYNQLDPLLRATGRPEGDVND-ESGFSPFPGNINQLVLKLDS 402 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1036.40.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1036.40.1 >prot_A-nodosum_M_contig1036.40.1 ID=prot_A-nodosum_M_contig1036.40.1|Name=mRNA_A-nodosum_M_contig1036.40.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=146bp RPSWSSPRKTLLAGDQTSHGHGDVHHLLFREGIAEDLHRRGFQWLFFFQDback to top mRNA from alignment at A-nodosum_M_contig1036:241658..243812+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig1036.40.1 ID=mRNA_A-nodosum_M_contig1036.40.1|Name=mRNA_A-nodosum_M_contig1036.40.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=2155bp|location=Sequence derived from alignment at A-nodosum_M_contig1036:241658..243812+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig1036:241658..243812+ >mRNA_A-nodosum_M_contig1036.40.1 ID=mRNA_A-nodosum_M_contig1036.40.1|Name=mRNA_A-nodosum_M_contig1036.40.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=438bp|location=Sequence derived from alignment at A-nodosum_M_contig1036:241658..243812+ (Ascophyllum nodosum dioecious)back to top |