mRNA_A-nodosum_M_contig1033.9.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig1033.9.1
Unique NamemRNA_A-nodosum_M_contig1033.9.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
BLAST of mRNA_A-nodosum_M_contig1033.9.1 vs. uniprot
Match: A0A6H5JER3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JER3_9PHAE)

HSP 1 Score: 538 bits (1385), Expect = 6.870e-187
Identity = 268/374 (71.66%), Postives = 310/374 (82.89%), Query Frame = 1
Query:  358 ARCSIQGKIVGILWMVPIYAVDSFVSLRFKDAALYVDTLRDCYEGYALYLFLALMVGYLGDGDEYKVVDILESCPPAEHAWPLRMFLKGPPPHGRDFLRFAKFGVLQYSVIKPLVATLSLILASVGLYKEGDFSVSGSWLYISFAMNLSVCYAFYCLGMFYYVLKSPLKPFDPVPKFLCIKAVLFMSYWQ--SIIIAGLSRMDLIHAMGSWSAGNVEKGIQDLLICVEMLIISVAHTRAFPCKPYEDGAVQRDGASLLEAHFAHHTAIRDFNEVMPVLIPSGFRPGPATTTVRIPVGER---ASWKGSEGARSTLFLRRDVARGLDRRAVRGGEIGIGIGNHKYSEEQGEGTEADERLE--DLDSLRQSLLGAE 1458
            +R  +QGKI+GILWMVPIYA+DSFVSLRF++ A YVD LRDCYEGYALYLFLALMVGYLGDGDEYKVVDILE CP ++HAWP  + +KGP PHGRDFLRFAKFG LQYS +KPL A ++L+LA  GL++EGDFS+ G WLYISF +NLSVCYAFYCLGMFYYVLK+PLKPFDPVPKFLCIKAVLF+S+WQ   I+IAGL +++LIH MG W+  NVEKGIQDLL+CVEML+I++AHTRAF CKPYEDGA +RDGASLLEAHFAHH+AIRDFNEVMPVLIPS FRPGPA ++VRIPVGER   A+W+ S+GA S+LF+ ++      RR+  GGE G G          GEG E D RLE  DLDSLRQSLL AE
Sbjct:   36 SRPVVQGKIIGILWMVPIYAIDSFVSLRFRNTAPYVDMLRDCYEGYALYLFLALMVGYLGDGDEYKVVDILEQCPSSKHAWPFGLVMKGPMPHGRDFLRFAKFGTLQYSCVKPLAAFVALVLAPFGLFQEGDFSIYGGWLYISFVVNLSVCYAFYCLGMFYYVLKTPLKPFDPVPKFLCIKAVLFLSFWQVCGIVIAGLVKLNLIHEMGGWTTNNVEKGIQDLLVCVEMLVIAIAHTRAFSCKPYEDGAPRRDGASLLEAHFAHHSAIRDFNEVMPVLIPSSFRPGPARSSVRIPVGERGGVATWRASDGAVSSLFMPKE------RRSTDGGEQGEG----------GEGRETDRRLELEDLDSLRQSLLSAE 393          
BLAST of mRNA_A-nodosum_M_contig1033.9.1 vs. uniprot
Match: D8LG17_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG17_ECTSI)

HSP 1 Score: 462 bits (1188), Expect = 1.290e-158
Identity = 212/271 (78.23%), Postives = 243/271 (89.67%), Query Frame = 1
Query:  358 ARCSIQGKIVGILWMVPIYAVDSFVSLRFKDAALYVDTLRDCYEGYALYLFLALMVGYLGDGDEYKVVDILESCPPAEHAWPLRMFLKGPPPHGRDFLRFAKFGVLQYSVIKPLVATLSLILASVGLYKEGDFSVSGSWLYISFAMNLSVCYAFYCLGMFYYVLKSPLKPFDPVPKFLCIKAVLFMSYWQSIIIAGLSRMDLIHAMGSWSAGNVEKGIQDLLICVEMLIISVAHTRAFPCKPYEDGAVQRDGASLLEAHFAHHTAIRDFNE 1170
            +R  +QGKI+GILWMVPIYA+DSFVSLRFK+ A YVD LRDCYEGYALYLFLALMVGYLGDGDEYKVVDILE CP ++HAWP  + +KGP PHGRDFLRFAKFG LQYS +KPL A ++L+LA  GL++EGDFS+ G WLYISF +NLSVCYAFYCLGMFYYVLK+PLKPFDPVPKFLCIKAVLF+S+WQ I+IAGL +++LIH MG W+  NVEKGIQDLL+CVEML+I++AHTRAF CKPYEDGA +RDGASLLEAHFAHH+AIRDFNE
Sbjct:   36 SRPVVQGKIIGILWMVPIYAIDSFVSLRFKNTAPYVDMLRDCYEGYALYLFLALMVGYLGDGDEYKVVDILEQCPSSKHAWPFGLVMKGPMPHGRDFLRFAKFGTLQYSCVKPLAAFVALVLAPFGLFQEGDFSIYGGWLYISFVVNLSVCYAFYCLGMFYYVLKTPLKPFDPVPKFLCIKAVLFLSFWQGIVIAGLVKLNLIHEMGGWTTNNVEKGIQDLLVCVEMLVIAIAHTRAFSCKPYEDGAPRRDGASLLEAHFAHHSAIRDFNE 306          
BLAST of mRNA_A-nodosum_M_contig1033.9.1 vs. uniprot
Match: A0A7S2UV50_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UV50_9STRA)

HSP 1 Score: 355 bits (910), Expect = 1.440e-115
Identity = 160/281 (56.94%), Postives = 213/281 (75.80%), Query Frame = 1
Query:  370 IQGKIVGILWMVPIYAVDSFVSLRFKDAALYVDTLRDCYEGYALYLFLALMVGYLGDGDEYKVVDILESCPPAEHAWPLRMFLKGPPPHGRDFLRFAKFGVLQYSVIKPLVATLSLILASVGLYKEGDFSVSGSWLYISFAMNLSVCYAFYCLGMFYYVLKSPLKPFDPVPKFLCIKAVLFMSYWQSIIIAGLSRMDLIHAMGSWSAGNVEKGIQDLLICVEMLIISVAHTRAFPCKPYEDGAVQRDGASLLEAHFAHHTAIRDFNEVMPVLIPSGFRPGP 1212
            IQ K+VGILWM PIYA DS+VSLRFKD A+Y D LRDCYEGY LYLFLAL++ Y+G G+E++VV   E+ P  EH +P  +  +GP PHG+ FLR+ KFG LQYS +KP+    ++++  VG Y EGDF+ +  W+Y++   N SV +AFYCLGMFY VLK  L PFDPVPKFLC+K VLF+S+WQS++IAGL ++ +I  +G+W++ N+  G+QDLLICVEM++I+  HTRAF   P+ +G  Q   +  LE HFAH+TAI+DFNEVMP+L+P+ F+PGP
Sbjct:   46 IQSKVVGILWMTPIYAFDSWVSLRFKDWAIYFDMLRDCYEGYVLYLFLALLIAYVGRGNEFEVVRACEAAPRVEHVFPFNLMFRGPVPHGKSFLRWCKFGTLQYSALKPVTTVFAVLMRLVGRYHEGDFNPTYGWVYVTTITNFSVIWAFYCLGMFYVVLKKSLAPFDPVPKFLCVKMVLFLSFWQSVVIAGLVKLGIITDLGAWTSENIAVGLQDLLICVEMMLIAFFHTRAFSWHPFSEGRAQHS-SRFLEDHFAHYTAIKDFNEVMPILLPTNFKPGP 325          
BLAST of mRNA_A-nodosum_M_contig1033.9.1 vs. uniprot
Match: A0A835Z2Y7_9STRA (Organic solute transporter subunit alpha/Transmembrane protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2Y7_9STRA)

HSP 1 Score: 337 bits (865), Expect = 8.940e-110
Identity = 165/274 (60.22%), Postives = 204/274 (74.45%), Query Frame = 1
Query:  373 QGKIVGILWMVPIYAVDSFVSLRFKDAALYVDTLRDCYEGYALYLFLALMVGYLGDGDEYKVVDILESCPPAEHAWPLRMFLKGPPPHGRDFLRFAKFGVLQYSVIKPLVATLSLILASVGLYKEGDFSVSGSWLYISFAMNLSVCYAFYCLGMFYYVLKSPLKPFDPVPKFLCIKAVLFMSYWQSIIIAGLSRMDLIHAMGSWSAGNVEKGIQDLLICVEMLIISVAHTRAFPCKPYEDGAVQRDGASLLEAHFAHHTAIRDFNEVMPVLIPS 1194
            Q KIVGILWMVPIYAV S++ LRFKDAA  ++ +RDCYEGYALYLFLALMV YLG GDE +VV +LE+  P +  +P+ +      P G  FLR+AK G LQYSVIKP  A ++L+L+ +G +KEGDF     W++++  +N SV  AFY L  FY +LK PL PF PVPKFLCIKAVLF+S+WQ +++AGL+R+ LIHA+G WS  NVE GIQDLLIC EM I++ AHT AFP  PY  GA +  G  +LE HFAHH A+RDFNEVMPVL+PS
Sbjct:   39 QSKIVGILWMVPIYAVSSWLGLRFKDAAPTLNMMRDCYEGYALYLFLALMVAYLGGGDERRVVALLETRKPMKTTFPMSLLFGKELPQGEQFLRWAKLGTLQYSVIKPSCAMMALVLSLMGRFKEGDFDPRKGWVWLTIIINASVAVAFYSLVAFYVMLKEPLAPFKPVPKFLCIKAVLFLSFWQGVVVAGLARLHLIHAIGGWSKENVETGIQDLLICTEMAIVATAHTIAFPVGPYVGGAARHSG-HILEDHFAHHCAVRDFNEVMPVLLPS 311          
BLAST of mRNA_A-nodosum_M_contig1033.9.1 vs. uniprot
Match: W7TCG7_9STRA (Transmembrane protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TCG7_9STRA)

HSP 1 Score: 327 bits (838), Expect = 2.490e-103
Identity = 163/306 (53.27%), Postives = 212/306 (69.28%), Query Frame = 1
Query:  370 IQGKIVGILWMVPIYAVDSFVSLRFKDAALYVDTLRDCYEGYALYLFLALMVGYLGDGDEYKVVDILESCPPAEHAWPLRMFLKGPP-PHGRDFLRFAKFGVLQYSVIKPLVATLSLILASVGLYKEGDFSVSGSWLYISFAMNLSVCYAFYCLGMFYYVLKSPLKPFDPVPKFLCIKAVLFMSYWQSIIIAGLSRMDLIHAMGSWSAGNVEKGIQDLLICVEMLIISVAHTRAFPCKPYEDGAVQRDGASLLEAHFAHHTAIRDFNEVMPVLIPSGFRPGPATTTVRI-PVGERASWKGSEGARS 1281
            +Q KIVGILWMVPIY+V S++SL FK  ALY+D  RDCYE Y LYLFLAL+V YLGDG+E +VV +L+  P  +H  P ++ L G   PHG DFLRF KFG +QY V+KP     ++ILA+ GLY EG F+++  W+Y +  MN+SV YAFYCLG+FY +L  PL+  +PVPKFLCIKAVLF+S+WQ ++IA L R+ L+   G W+  NV   +Q++LICVEM++++ AH  AFP   Y      R G  LL  HF+H TA+RDFNEVMPVL+PS F PG A +  R   +G    W+  +G RS
Sbjct:   39 VQSKIVGILWMVPIYSVQSWLSLSFKRYALYLDMFRDCYEAYVLYLFLALLVAYLGDGEEERVVALLQHQPRVKHIMPFKLCLGGGEVPHGADFLRFCKFGTMQYIVLKPACTLAAVILAACGLYGEGSFALNRFWIYQTLIMNVSVGYAFYCLGLFYVLLHGPLEAHNPVPKFLCIKAVLFLSFWQGVVIAALVRLGLLPHFGEWTTQNVAMAVQEVLICVEMMLVAFAHQYAFPVAEYVGAPAMRTG--LLSDHFSHTTALRDFNEVMPVLLPSNFTPGLAQSIDRRGEIGLAGGWETGDGNRS 342          
BLAST of mRNA_A-nodosum_M_contig1033.9.1 vs. uniprot
Match: A0A484E0V2_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E0V2_BRELC)

HSP 1 Score: 314 bits (804), Expect = 1.830e-99
Identity = 154/289 (53.29%), Postives = 206/289 (71.28%), Query Frame = 1
Query:  370 IQGKIVGILWMVPIYAVDSFVSLRFKDAALYVDTLRDCYEGYALYLFLALMVGYLGDGDEYKVVDILESCPPAEHAWPLRMFLKGPPPH-GRDFLRFAKFGVLQYSVIKPLVATLSLILASVGLYKEGDFSVSGSWLYISFAMNLSVCYAFYCLGMFYYVLKSPLKPFDPVPKFLCIKAVLFMSYWQSIIIAGLSRMDLIHAMGSWSAGNVEKGIQDLLICVEMLIISVAHTRAFPCKPYEDGAVQ-RDGASLLEAHFAHHTAIRDFNEVMPVLIPSGFRPGPATTTVR 1230
            +Q KIVGILWM+PIYA DS++SLRFKDAALY+D +RD YEGY +YLFLALM+ YLG G   +V+  + S PP  H WP   + +  P H G  FLR  K   +Q+ V+KPL+A ++++L   G+Y++G+FSV   +LY S  +N S+ YAFY L +FY  LK+ L P++PVPKFLCIKAVLF+S+WQS+++A LSR ++IH +GSWS  NV  GIQ+LLIC EM  +++AH RAFP  PY  G +  R G  +L  H A   A+RDFNEVMPV++P+ F+PG AT   +
Sbjct:   60 VQSKIVGILWMIPIYATDSWLSLRFKDAALYLDLMRDSYEGYVIYLFLALMIAYLGQGSNERVIAAMTSLPPLHHPWPFNNYFQ--PIHLGATFLRDCKKATMQFVVVKPLMAFVAIVLRLYGMYEQGNFSVEQGYLYTSLVVNASITYAFYYLVLFYMALKTQLAPYNPVPKFLCIKAVLFLSFWQSVVLAFLSRFEIIHELGSWSVENVTTGIQNLLICFEMFFVALAHHRAFPYTPYMHGNLALRTG--ILADHLALEDAMRDFNEVMPVVLPTPFKPGAATVKTK 344          
BLAST of mRNA_A-nodosum_M_contig1033.9.1 vs. uniprot
Match: A0A8K1CG08_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CG08_PYTOL)

HSP 1 Score: 311 bits (797), Expect = 1.590e-98
Identity = 152/280 (54.29%), Postives = 200/280 (71.43%), Query Frame = 1
Query:  370 IQGKIVGILWMVPIYAVDSFVSLRFKDAALYVDTLRDCYEGYALYLFLALMVGYLGDGDEYKVVDILESCPPAEHAWPLRMFLKGPPPHGRDFLRFAKFGVLQYSVIKPLVATLSLILASVGLYKEGDFSVSGSWLYISFAMNLSVCYAFYCLGMFYYVLKSPLKPFDPVPKFLCIKAVLFMSYWQSIIIAGLSRMDLIHAMGSWSAGNVEKGIQDLLICVEMLIISVAHTRAFPCKPYEDGAVQRDGASLLEAHFAHHTAIRDFNEVMPVLIPSGFRPG 1209
            +Q KIVGILWMVPIYA DS++SLRFKDAALY+D +RD YEGY +YLFLALM+ YLGDG   KVV +L   P   H +P   +L  P   G +FLR  K   +Q+ V+KPL+A  +++L   G+Y +G+FSV+  +LYIS  +N S+ YAFY L +FY  L   LKP++PVPKFLCIKAVLF+S+WQS+++A LSR  +IH +GSWS  NV  GIQ+LLIC EM  +++AH +AFP +PY   +      SLL  H +   A+RDFNEVMPV++P+ F+PG
Sbjct:   57 VQSKIVGILWMVPIYATDSWLSLRFKDAALYLDLMRDSYEGYVIYLFLALMIAYLGDGSNEKVVAVLNRLPDLPHPFPFNRWLS-PIRMGPEFLRDCKMATMQFVVLKPLMAFFAIVLQVYGVYDQGNFSVTKGYLYISLVVNASITYAFYYLVLFYLALGDHLKPYNPVPKFLCIKAVLFLSFWQSVVLAFLSRFQIIHEIGSWSVENVTTGIQNLLICFEMCFVALAHHKAFPYEPYVGRSSSPQRTSLLADHLSLEDAMRDFNEVMPVVLPTPFKPG 335          
BLAST of mRNA_A-nodosum_M_contig1033.9.1 vs. uniprot
Match: H3H3Y5_PHYRM (Uncharacterized protein n=18 Tax=Phytophthora TaxID=4783 RepID=H3H3Y5_PHYRM)

HSP 1 Score: 309 bits (792), Expect = 1.570e-97
Identity = 150/283 (53.00%), Postives = 199/283 (70.32%), Query Frame = 1
Query:  370 IQGKIVGILWMVPIYAVDSFVSLRFKDAALYVDTLRDCYEGYALYLFLALMVGYLGDGDEYKVVDILESCPPAEHAWPLRMFLKGPPPHGRDFLRFAKFGVLQYSVIKPLVATLSLILASVGLYKEGDFSVSGSWLYISFAMNLSVCYAFYCLGMFYYVLKSPLKPFDPVPKFLCIKAVLFMSYWQSIIIAGLSRMDLIHAMGSWSAGNVEKGIQDLLICVEMLIISVAHTRAFPCKPYEDGAVQRDGASLLEAHFAHHTAIRDFNEVMPVLIPSGFRPGPAT 1218
            +Q KIVGILWM+PIYA DS++SLRFKDAALY+D +RD YEGY +YLFLALM+ YLG G   +V+ I+   P  EH WP   + K P   G  FLR  K   +Q+ V+KP++A ++++L   G+Y +G+FS    +LY S  +N S+ YAFY L +FY  L + L P++PVPKFLCIKAVLF+S+WQS+++A LSR  +IH +GSWS  NV  GIQ+LLIC EM  +++AH RAFP +PY  G       S+L  H A   A+RDFNEVMPV++P+ F+PG AT
Sbjct:   60 VQSKIVGILWMIPIYATDSWLSLRFKDAALYLDLMRDSYEGYVIYLFLALMIAYLGGGSNERVITIMRGLPDLEHPWPFNRWCK-PIQMGPGFLRDCKMATMQFVVVKPMMAFVAIVLRINGMYDQGNFSAKKGYLYTSLIVNASITYAFYYLVLFYLALSTQLAPYNPVPKFLCIKAVLFLSFWQSVVLAFLSRFQIIHELGSWSVENVTTGIQNLLICFEMCFVALAHHRAFPYQPYVHGNPALR-TSILADHLAFEDAMRDFNEVMPVVLPTPFKPGAAT 340          
BLAST of mRNA_A-nodosum_M_contig1033.9.1 vs. uniprot
Match: K3X8Z4_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X8Z4_GLOUD)

HSP 1 Score: 309 bits (791), Expect = 1.790e-97
Identity = 154/284 (54.23%), Postives = 197/284 (69.37%), Query Frame = 1
Query:  370 IQGKIVGILWMVPIYAVDSFVSLRFKDAALYVDTLRDCYEGYALYLFLALMVGYLGDGDEYKVVDILESCPPAEHAWPLRMFLKGPPPHGRDFLRFAKFGVLQYSVIKPLVATLSLILASVGLYKEGDFSVSGSWLYISFAMNLSVCYAFYCLGMFYYVLKSPLKPFDPVPKFLCIKAVLFMSYWQSIIIAGLSRMDLIHAMGSWSAGNVEKGIQDLLICVEMLIISVAHTRAFPCKPYEDGAVQRDGASL----LEAHFAHHTAIRDFNEVMPVLIPSGFRPG 1209
            +Q KI+GILWMVPIYA DS++SLRFKDAALY+D +RD YEGY +YLFLALM+ YLG G   KVV IL S P   H WP   +   P   G +F+R  K   +Q+ V+KPL+A L+++L   G+Y +G FSV+  +LY S  +N S+ YAFY L +FY  L   LKP++PVPKFLCIKAVLF+S+WQS+++A LSR  +IH +GSWS  NV  GIQ+LLIC EM  +++AH  AFP  PY D       ASL    L  H A   A+RDFNEVMPV++P+ F+PG
Sbjct:   65 VQSKIIGILWMVPIYATDSWLSLRFKDAALYLDLMRDSYEGYVIYLFLALMIAYLGGGSHEKVVQILRSLPDLSHPWPFNKWC-APIKMGPEFIRDCKMATMQFVVLKPLMAFLAIVLEIRGVYNQGSFSVTTGYLYTSLIVNTSITYAFYYLVLFYLALGDHLKPYNPVPKFLCIKAVLFLSFWQSVVLAFLSRFQIIHEVGSWSVENVTTGIQNLLICFEMCFVALAHHHAFPYAPYIDATDDGTHASLRRNILADHLAFGDAMRDFNEVMPVVLPTQFKPG 347          
BLAST of mRNA_A-nodosum_M_contig1033.9.1 vs. uniprot
Match: A0A024GQJ0_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GQJ0_9STRA)

HSP 1 Score: 308 bits (790), Expect = 2.440e-97
Identity = 154/330 (46.67%), Postives = 216/330 (65.45%), Query Frame = 1
Query:  250 YFAVLGTAMFTIQLGSWTCAEF*SEANAPLCFNPTTARC------SIQGKIVGILWMVPIYAVDSFVSLRFKDAALYVDTLRDCYEGYALYLFLALMVGYLGDGDEYKVVDILESCPPAEHAWPLRMFLKGPPPHGRDFLRFAKFGVLQYSVIKPLVATLSLILASVGLYKEGDFSVSGSWLYISFAMNLSVCYAFYCLGMFYYVLKSPLKPFDPVPKFLCIKAVLFMSYWQSIIIAGLSRMDLIHAMGSWSAGNVEKGIQDLLICVEMLIISVAHTRAFPCKPYEDGAVQRDGASL----LEAHFAHHTAIRDFNEVMPVLIPSGFRPG 1209
            Y   + TA   +Q   W  A     A+  +      +        +IQ KIVGILWMVPIYA DS++SLRFK+ ALY+D +RDCYE Y +YLFLALM+ YLGDG   +V+ I+   P  +H WP++ + K P     +FLR  K   +Q+ ++KPL+A  ++IL     Y +G F +   ++Y+SF +NLSV YAFY L +FYY L+ PL+P++PVPK LCIKAV+F+S+WQS+++A LSR  +IH +GSWS  NV  GIQ+LLIC EM ++++AHTRAFP   Y+D   +    +L    L  H A  +A+RDFNEVMP+++P+ F+PG
Sbjct:    7 YIVQIATAEARVQRSVWVVAGLCVAASIIISVRLIRSHLRNFTKPAIQSKIVGILWMVPIYATDSWLSLRFKNIALYLDLMRDCYEAYVVYLFLALMIAYLGDGSHERVLQIIHPLPSVKHFWPVK-YCKKPEMMAPEFLRDCKIATMQFVIMKPLMALFAIILQVNDAYDQGQFRLDKGYIYVSFFINLSVTYAFYYLVLFYYALEIPLRPYNPVPKLLCIKAVIFLSFWQSVVLAFLSRFRIIHELGSWSVENVTTGIQNLLICFEMTLVAIAHTRAFP---YQDFIPEHGSPTLRTSFLADHLAFESAMRDFNEVMPIVLPTSFKPG 332          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1033.9.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JER3_9PHAE6.870e-18771.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LG17_ECTSI1.290e-15878.23Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2UV50_9STRA1.440e-11556.94Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A835Z2Y7_9STRA8.940e-11060.22Organic solute transporter subunit alpha/Transmemb... [more]
W7TCG7_9STRA2.490e-10353.27Transmembrane protein n=2 Tax=Monodopsidaceae TaxI... [more]
A0A484E0V2_BRELC1.830e-9953.29Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A8K1CG08_PYTOL1.590e-9854.29Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
H3H3Y5_PHYRM1.570e-9753.00Uncharacterized protein n=18 Tax=Phytophthora TaxI... [more]
K3X8Z4_GLOUD1.790e-9754.23Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A024GQJ0_9STRA2.440e-9746.67Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1033contigA-nodosum_M_contig1033:12990..16254 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LG17
PFAMsSolute_trans_a
Model size1523
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons6
Evalue7.54e-153
EggNOG OGsKOG2641@1|root,KOG2641@2759|Eukaryota
Ec32 ortholog descriptionOrganic solute transporter subunit alpha/Transmembrane protein 184
Ec32 orthologEc-21_004950.1
Descriptionnegative regulation of brassinosteroid mediated signaling pathway
Cds size1122
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1033.9.1prot_A-nodosum_M_contig1033.9.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig1033 13389..16254 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866401.4763656-UTR-A-nodosum_M_contig1033:12989..133881680866401.4763656-UTR-A-nodosum_M_contig1033:12989..13388Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig1033 12990..13388 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866401.486708-CDS-A-nodosum_M_contig1033:13388..135441680866401.486708-CDS-A-nodosum_M_contig1033:13388..13544Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1033 13389..13544 +
1680866401.4950395-CDS-A-nodosum_M_contig1033:13853..140451680866401.4950395-CDS-A-nodosum_M_contig1033:13853..14045Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1033 13854..14045 +
1680866401.5079854-CDS-A-nodosum_M_contig1033:14263..144431680866401.5079854-CDS-A-nodosum_M_contig1033:14263..14443Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1033 14264..14443 +
1680866401.5181916-CDS-A-nodosum_M_contig1033:14760..148101680866401.5181916-CDS-A-nodosum_M_contig1033:14760..14810Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1033 14761..14810 +
1680866401.5290694-CDS-A-nodosum_M_contig1033:15408..156011680866401.5290694-CDS-A-nodosum_M_contig1033:15408..15601Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1033 15409..15601 +
1680866401.5414574-CDS-A-nodosum_M_contig1033:15903..162541680866401.5414574-CDS-A-nodosum_M_contig1033:15903..16254Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1033 15904..16254 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig1033.9.1

>prot_A-nodosum_M_contig1033.9.1 ID=prot_A-nodosum_M_contig1033.9.1|Name=mRNA_A-nodosum_M_contig1033.9.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=374bp
MVPIYAVDSFVSLRFKDAALYVDTLRDCYEGYALYLFLALMVGYLGDGDE
YKVVDILESCPPAEHAWPLRMFLKGPPPHGRDFLRFAKFGVLQYSVIKPL
VATLSLILASVGLYKEGDFSVSGSWLYISFAMNLSVCYAFYCLGMFYYVL
KSPLKPFDPVPKFLCIKAVLFMSYWQSIIIAGLSRMDLIHAMGSWSAGNV
EKGIQDLLICVEMLIISVAHTRAFPCKPYEDGAVQRDGASLLEAHFAHHT
AIRDFNEVMPVLIPSGFRPGPATTTVRIPVGERASWKGSEGARSTLFLRR
DVARGLDRRAVRGGEIGIGIGNHKYSEEQGEGTEADERLEDLDSLRQSLL
GAEGTLLQQEYQWDQGRRPQEEDW
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mRNA from alignment at A-nodosum_M_contig1033:12990..16254+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig1033.9.1 ID=mRNA_A-nodosum_M_contig1033.9.1|Name=mRNA_A-nodosum_M_contig1033.9.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=3265bp|location=Sequence derived from alignment at A-nodosum_M_contig1033:12990..16254+ (Ascophyllum nodosum dioecious)
TGTACCCAATCTGTTGAATAATCCTCAAAGCTCAATCGAAGAGGTGCAAG AGCTTGTCAAATTTGGGATCGATGGGCGCCAAATTTCAGCCGTACAAAAA AAAAAAAATCTGCAAGTAGAAACGTCTTCGTCACTCCAGCTACATACTTC AGTGCATTCGATGGAGCTCTAGATATTTCGTCCCTCGTGTTGTCAACAGA AAGTTTTCAGGCCTAAGGAATCCCCTCGGGCTTGGGCAGCGTACACCTAT ACTTTGCCGTGTTGGGAACAGCTATGTTTACGATACAGCTTGGCTCTTGG ACGTGCGCTGAGTTCTGAAGCGAGGCGAATGCCCCTCTCTGCTTCAACCC GACCACGGCCCGGTGCTCCATACAGGGAAAGATCGTGGGTATCCTGTGGA TGGTTCCGATATACGCGGTGGACTCGTTCGTGAGCCTGCGCTTCAAGGAT GCCGCGCTGTACGTGGACACCTTGCGTGATTGCTACGAAGGCTACGCGCT GTACCTTTTCCTGGCGCTTATGGTGGGGTACCTTGGGGACGGCGACGAGT ATAAGGTACAGACAGGACCAAGGTACCGGTGTAGCATTGCGGAAAGAGAG AGAGAGAGAGAAAGAGGGAGCGGTGCTGTAGCAAAGCATTTAGGTGCAGC CCCTAAAGCTCTGCCCATCCTGATAGTGTACCAGAGATTTGGAAGGCGTC ATACAACGAAATCCGCTAAACTTCTGAGATGCCTTGTGGTGATGACCTTT TGAATACGCTCTGTTGGTTTTGGTCGGCTGAGTAAGCGACAGACGCGCCA GGTGAATGCCACTCCAAAAACCCTTGTATCCCACTCCCCCCCCCAAAAAA AAACTCGCCCGCAGGTGGTAGATATTCTGGAAAGCTGCCCGCCAGCCGAA CACGCGTGGCCATTAAGGATGTTCTTGAAGGGACCACCGCCGCACGGCAG GGACTTTCTGCGCTTCGCCAAGTTTGGTGTGCTGCAGTACAGCGTCATCA AGCCTCTCGTCGCTACCTTGTCTCTCATCCTTGCGTCGGTGGGGTTGTAC AAAGAGGTGCGCGTCAACTCGCTCGAGGGAGCAGCTCTGTCCACGGGCGA CCCCAGGCGTCGTGCTACCGGCGCCGTGTAGCTCTTATCGTTGAGTGGAG CGTGGATCTTTTCTTACATCAAGATCAGAGTGTCGCTATTTTTTTTTTTT AAGAACGGAATTGTTTATGCTGCCGATGCTGCTGCTGCGATCTGTCTGCT TTCGATGCCGGTCCCATCCTGAAGGGGGACTTTAGCGTGTCCGGAAGCTG GCTGTACATCTCCTTCGCTATGAACTTGAGCGTCTGTTACGCGTTCTACT GCCTGGGGATGTTTTACTACGTCCTGAAAAGTCCACTGAAGCCCTTCGAC CCCGTCCCGAAGTTCCTCTGCATCAAGGCAGTCCTGTTCATGAGTTACTG GCAGGTGAGGTCGGCGCTATCGATACTCGTTGCTCTCGCTCCGTTATGCC CCACCCGCACAGATAGATGATGGTGCTGCGATCGATCCCAAGCTCTCTTG GTACAGAACTCACAGATATCTCTGCAGCAAAGCATATGATTGCCCCCACG CCGCGGCATTAACCTATTGTGCGTTCCCTTTGAGGATCAACACGAGCTGA TCATCGTCCACTATTTTATTAGTGGGTGCGGAGAGGGAGTCGTTTGGTCA CTTCGACTAAGACTCGAACGCTGTTTACCTCACAACTAATATCTTCCTTT TGCTCTAATATTGTAACGCAGAGCATTATCATCGCCGGCCTGTCTAGGAT GGATCTAATCCACGCGATGGGGTGAGTGCAGGCGAAGAAATAGACTTGTG AAAACCTACAGGATGGCTTTCCACGTTCGAGTACCCTCTTGTTTTCGGCG TTTGAGTTCACAGCCGTTAGTACTCTATGTTAGTACTCTATATTAATACT CTATATCAATACTCTATGTTAATACTCTATATCAATACTCTATGTTAATA CTCTATGTTAATACTCTATGTTAGTACTCTATATCAATACTTTATGTTAA TACTTTATGTTAATACTCTATATTAATACTAAAGGGCCCTCTTCGCCCGA GTGGTCTAGTAGGTAACCTGCACACCTGCTAGTGCGGAAGTCGTGAGTTC GATTCTGGTCAAAGCAGGATATTTATTGTGTCTAATAGTCCGTAACGGAA AGCGTGAGAACGTGAGTAAGTAAAATGGAACCATTGATGGACGAGTTGGA AGAGTGCTGAACTTGTATCGCGATAAAAAATCGTAAGGCGTGAACCGTGG AGAGATGGGAAGGTCCTTAGTGGCCACAGAGGCAGGATGTCAACGTTGAG GCCCATCGGCTATAAGTGAGATGAAAAAAAAGGCAACATTGTGTCTAATC AGATCACACGAACTTTCAGGTCGTGGTCAGCGGGGAACGTCGAGAAGGGG ATTCAGGATTTGCTCATCTGCGTGGAGATGCTCATCATCTCGGTGGCTCA CACGAGGGCGTTCCCATGTAAGCCCTACGAGGACGGAGCCGTCCAGCGCG ACGGAGCCAGCCTGCTGGAGGCACACTTCGCGCACCACACGGCAATACGA GACTTCAACGAGGTAGACTGAAGCTTAGGTGATATCGTGGGGGAGGAATA CCCCACACCGTGGCATTTTGATAGAAGGCAGTGGCTCCCTTCACCGCCCA AAATCCGAAAATCTCGGTCGTCAGTCTGCCCGTCCCGCCCTTCCGCGTGT CTCTCTTCGGTGTCGCCTTAGCTCTTGTGGCCCGATCCCAGCTCTCGAGT GTACCATCGTATCGCGCGGGATACGCAAGTAGGCACGATTCTCGCCGTCG TGCTTCTCCCCCAGCCACCCTCGACGACTAAAGGGGACGCGTTTTTGGCT CTCGTCGATCGCAGGTCATGCCCGTCCTCATTCCGTCGGGGTTCCGACCG GGCCCGGCGACGACCACTGTCCGGATACCGGTGGGCGAGCGAGCCTCGTG GAAGGGATCCGAAGGCGCCAGAAGCACCCTCTTCTTGCGTAGAGACGTGG CGAGAGGTCTCGACCGGAGAGCAGTGCGGGGAGGGGAGATTGGCATTGGC ATTGGCAACCACAAATACAGCGAGGAGCAGGGAGAAGGGACGGAGGCGGA CGAAAGATTGGAAGATTTGGACTCGTTGAGGCAGAGTCTTTTGGGTGCCG AGGGGACGCTTTTGCAGCAGGAGTATCAGTGGGATCAGGGGCGAAGGCCA CAGGAGGAGGACTGG
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Coding sequence (CDS) from alignment at A-nodosum_M_contig1033:12990..16254+

>mRNA_A-nodosum_M_contig1033.9.1 ID=mRNA_A-nodosum_M_contig1033.9.1|Name=mRNA_A-nodosum_M_contig1033.9.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1122bp|location=Sequence derived from alignment at A-nodosum_M_contig1033:12990..16254+ (Ascophyllum nodosum dioecious)
ATGGTTCCGATATACGCGGTGGACTCGTTCGTGAGCCTGCGCTTCAAGGA
TGCCGCGCTGTACGTGGACACCTTGCGTGATTGCTACGAAGGCTACGCGC
TGTACCTTTTCCTGGCGCTTATGGTGGGGTACCTTGGGGACGGCGACGAG
TATAAGGTGGTAGATATTCTGGAAAGCTGCCCGCCAGCCGAACACGCGTG
GCCATTAAGGATGTTCTTGAAGGGACCACCGCCGCACGGCAGGGACTTTC
TGCGCTTCGCCAAGTTTGGTGTGCTGCAGTACAGCGTCATCAAGCCTCTC
GTCGCTACCTTGTCTCTCATCCTTGCGTCGGTGGGGTTGTACAAAGAGGG
GGACTTTAGCGTGTCCGGAAGCTGGCTGTACATCTCCTTCGCTATGAACT
TGAGCGTCTGTTACGCGTTCTACTGCCTGGGGATGTTTTACTACGTCCTG
AAAAGTCCACTGAAGCCCTTCGACCCCGTCCCGAAGTTCCTCTGCATCAA
GGCAGTCCTGTTCATGAGTTACTGGCAGAGCATTATCATCGCCGGCCTGT
CTAGGATGGATCTAATCCACGCGATGGGGTCGTGGTCAGCGGGGAACGTC
GAGAAGGGGATTCAGGATTTGCTCATCTGCGTGGAGATGCTCATCATCTC
GGTGGCTCACACGAGGGCGTTCCCATGTAAGCCCTACGAGGACGGAGCCG
TCCAGCGCGACGGAGCCAGCCTGCTGGAGGCACACTTCGCGCACCACACG
GCAATACGAGACTTCAACGAGGTCATGCCCGTCCTCATTCCGTCGGGGTT
CCGACCGGGCCCGGCGACGACCACTGTCCGGATACCGGTGGGCGAGCGAG
CCTCGTGGAAGGGATCCGAAGGCGCCAGAAGCACCCTCTTCTTGCGTAGA
GACGTGGCGAGAGGTCTCGACCGGAGAGCAGTGCGGGGAGGGGAGATTGG
CATTGGCATTGGCAACCACAAATACAGCGAGGAGCAGGGAGAAGGGACGG
AGGCGGACGAAAGATTGGAAGATTTGGACTCGTTGAGGCAGAGTCTTTTG
GGTGCCGAGGGGACGCTTTTGCAGCAGGAGTATCAGTGGGATCAGGGGCG
AAGGCCACAGGAGGAGGACTGG
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