mRNA_A-nodosum_M_contig1033.25.5 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig1033.25.5 vs. uniprot
Match: A0A6H5KXN7_9PHAE (Transmembrane 9 superfamily member n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXN7_9PHAE) HSP 1 Score: 300 bits (769), Expect = 9.580e-90 Identity = 152/236 (64.41%), Postives = 173/236 (73.31%), Query Frame = 1
Query: 13 QWQKTMLLSVILMPSVLFPVMFLLNLVAGHYNTVTAVPLKAMVNMVLIWMFVSFPLGVAGSIFGRHWGGKANFPCRVNSIPRQIPEAAWYANPTLVVMVAGLLPFGSIFIEMYFILTSLWGYMYYXXXXXXXXXXXXXXXXXXXXXIVAVY-----TNYHWQWVAFLSAGSTAIYVFLYAVYYFGFHTQQKGFLQVSFYFGYMGLFCAALAAMCGSIGVLGSTVFVKQIYRNIKVD 705
QWQKTM+LS +++PS+LFPV+F+LNLVA HYNTV +P A+ M LIW+FVSFPL VAGS+FGRHWGGK NFPCRVNSIPR IPE+ WY+ P +VV +AG+LPFGSIFIEMYFIL SLW Y YY IVAVY NYHWQWV+FLSA STA YVFLY+ YY F T+Q GF+Q+SFYFGYMGLFCAAL GSTVFVKQIYRNIKVD
Sbjct: 375 QWQKTMVLSAVMVPSILFPVVFVLNLVAMHYNTVNTIPFMAVFKMALIWVFVSFPLCVAGSMFGRHWGGKGNFPCRVNSIPRPIPESVWYSQPNVVVPLAGILPFGSIFIEMYFILASLWAYKYYYVYGFVLLVFAILVVVLVCTSIVAVYFVLNGENYHWQWVSFLSAASTAGYVFLYSAYYLWFKTRQSGFIQISFYFGYMGLFCAALXXXXXXXXXXGSTVFVKQIYRNIKVD 610
BLAST of mRNA_A-nodosum_M_contig1033.25.5 vs. uniprot
Match: D8LEX9_ECTSI (Transmembrane 9 superfamily member n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEX9_ECTSI) HSP 1 Score: 287 bits (735), Expect = 1.170e-89 Identity = 149/231 (64.50%), Postives = 167/231 (72.29%), Query Frame = 1
Query: 28 MLLSVILMPSVLFPVMFLLNLVAGHYNTVTAVPLKAMVNMVLIWMFVSFPLGVAGSIFGRHWGGKANFPCRVNSIPRQIPEAAWYANPTLVVMVAGLLPFGSIFIEMYFILTSLWGYMYYXXXXXXXXXXXXXXXXXXXXXIVAVY-----TNYHWQWVAFLSAGSTAIYVFLYAVYYFGFHTQQKGFLQVSFYFGYMGLFCAALAAMCGSIGVLGSTVFVKQIYRNIKVD 705
M+LS +++PSVLFPV+FLLNLVA HYNTV +P A++ M LIW+FVSFPL VAGS+FGRHWGGK NFPCRVNSIPR IPE+ WY P +VV +AG+LPFGSIFIEMYFILTSLW MYY IVAVY NYHWQWV+FLSA STA YVFLY+ YY F T Q GF+Q+SFYFGYMGLFCAA GSTVFVKQIYRNIKVD
Sbjct: 1 MMLSAVMVPSVLFPVVFLLNLVAMHYNTVNTIPFMAVLKMALIWVFVSFPLCVAGSMFGRHWGGKGNFPCRVNSIPRPIPESVWYLQPNVVVPLAGILPFGSIFIEMYFILTSLWANMYYYVYGFVLLVFAILVVVLVCTTIVAVYFVLNGENYHWQWVSFLSAASTAGYVFLYSGYYLWFKTHQSGFMQISFYFGYMGLFCAAXXXXXXXXXXXGSTVFVKQIYRNIKVD 231
BLAST of mRNA_A-nodosum_M_contig1033.25.5 vs. uniprot
Match: A0A835YQT7_9STRA (Transmembrane 9 superfamily member n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQT7_9STRA) HSP 1 Score: 277 bits (708), Expect = 6.130e-81 Identity = 134/236 (56.78%), Postives = 168/236 (71.19%), Query Frame = 1
Query: 13 QWQKTMLLSVILMPSVLFPVMFLLNLVAGHYNTVTAVPLKAMVNMVLIWMFVSFPLGVAGSIFGRHWGGKANFPCRVNSIPRQIPEAAWYANPTLVVMVAGLLPFGSIFIEMYFILTSLWGYMYYXXXXXXXXXXXXXXXXXXXXXIVAVY-----TNYHWQWVAFLSAGSTAIYVFLYAVYYFGFHTQQKGFLQVSFYFGYMGLFCAALAAMCGSIGVLGSTVFVKQIYRNIKVD 705
QWQ+ MLL+V+L+P+++ V+ LN VA +Y+T+ +P +V M LIW+FV+FPL V G +FGRHWGGKA+FPCRVNSI R IP WY P V+ + G+LPFGSIFIEMYFI TS W Y +Y IVAVY NYHWQW++FL++GSTA YVFLY++YYF F T+ GFLQ+SFYFGYMGLFC AL +CG+IG+ GS+VFVKQIY+NIKVD
Sbjct: 365 QWQRCMLLTVVLLPALVITVLSFLNTVAVYYDTINTIPFMVIVKMALIWLFVAFPLAVVGCMFGRHWGGKASFPCRVNSIARPIPPGPWYTRPAAVIPLTGILPFGSIFIEMYFIFTSFWNYKFYYVYGFMLLVYAILSVVLVCATIVAVYFVLNAENYHWQWISFLASGSTAGYVFLYSIYYFYFKTEMFGFLQISFYFGYMGLFCVALFVLCGTIGLAGSSVFVKQIYKNIKVD 600
BLAST of mRNA_A-nodosum_M_contig1033.25.5 vs. uniprot
Match: A0A7S4DBZ3_HETAK (Transmembrane 9 superfamily member n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DBZ3_HETAK) HSP 1 Score: 248 bits (633), Expect = 1.090e-71 Identity = 119/236 (50.42%), Postives = 157/236 (66.53%), Query Frame = 1
Query: 13 QWQKTMLLSVILMPSVLFPVMFLLNLVAGHYNTVTAVPLKAMVNMVLIWMFVSFPLGVAGSIFGRHWGGKANFPCRVNSIPRQIPEAAWYANPTLVVMVAGLLPFGSIFIEMYFILTSLWGYMYYXXXXXXXXXXXXXXXXXXXXXIVAVY-----TNYHWQWVAFLSAGSTAIYVFLYAVYYFGFHTQQKGFLQVSFYFGYMGLFCAALAAMCGSIGVLGSTVFVKQIYRNIKVD 705
QWQK MLL+V L+P+ L + LN VA +Y+T +P ++ M IW+FVSFPL V+G++FGRHWGG+A+FPCRVN+ PR IP WY P + + + G+LPFGSIFIEMYF+ TS W Y +Y +VA Y NYHWQW++F ++GST+ YVFLY++YYF F TQ GFLQ+SFYFGYM +FC L + G+IG G++ FV+ IYRN+KVD
Sbjct: 214 QWQKAMLLTVALLPTALALAVSALNAVAAYYDTTNTIPFGVILKMFAIWVFVSFPLAVSGTMFGRHWGGRADFPCRVNTFPRPIPLGKWYTKPWVFIPLTGILPFGSIFIEMYFVFTSFWNYKFYYVYGFMLLVYMILAVVTMCTAVVATYFVLNAENYHWQWISFTASGSTSGYVFLYSIYYFLFKTQMSGFLQISFYFGYMAIFCFGLFLLTGTIGHFGASKFVRAIYRNVKVD 449
BLAST of mRNA_A-nodosum_M_contig1033.25.5 vs. uniprot
Match: W7TF26_9STRA (Transmembrane 9 superfamily member n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TF26_9STRA) HSP 1 Score: 246 bits (629), Expect = 1.710e-69 Identity = 119/236 (50.42%), Postives = 159/236 (67.37%), Query Frame = 1
Query: 13 QWQKTMLLSVILMPSVLFPVMFLLNLVAGHYNTVTAVPLKAMVNMVLIWMFVSFPLGVAGSIFGRHWGGKANFPCRVNSIPRQIPEAAWYANPTLVVMVAGLLPFGSIFIEMYFILTSLWGYMYYXXXXXXXXXXXXXXXXXXXXXIVAVY-----TNYHWQWVAFLSAGSTAIYVFLYAVYYFGFHTQQKGFLQVSFYFGYMGLFCAALAAMCGSIGVLGSTVFVKQIYRNIKVD 705
QWQKTMLL+V L P ++ V+F LN++A +Y+T A+ L + + IW+FVS PL V G++FGRHW GKA+FPCR+NS+ R IP WY +P L+ V G+LPFGSIFIEMYFI TS W Y +Y IVAVY NYHWQW++F+++GSTA YVFLY++YYF TQ G LQ +FYFGY +FCA L +CG++GV+G ++FV++IY +K+D
Sbjct: 366 QWQKTMLLTVFLFPVLVLTVVFGLNIIAEYYDTTHALHLSTIFKIFAIWLFVSLPLTVVGTLFGRHWAGKADFPCRINSMARPIPLGPWYTHPALIAAVTGILPFGSIFIEMYFIFTSFWNYKFYYVYHFLLLVYLILMVVSICTTIVAVYFLLNVENYHWQWLSFMASGSTAGYVFLYSIYYFAVKTQMTGLLQTAFYFGYTFVFCAGLFLLCGALGVIGGSLFVRRIYSGLKID 601
BLAST of mRNA_A-nodosum_M_contig1033.25.5 vs. uniprot
Match: A0A7R9U3Y7_9STRA (Transmembrane 9 superfamily member n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U3Y7_9STRA) HSP 1 Score: 241 bits (616), Expect = 6.250e-69 Identity = 123/238 (51.68%), Postives = 156/238 (65.55%), Query Frame = 1
Query: 13 QWQKTMLLSVILMPSVLFPVMFLLNLVAGHYNTVTAVPLKAMVNMVLIWMFVSFPLGVAGSIFGRHWGGKANFPCRVNSIPRQIPEAA-WYANPTLVVMVAGLLPFGSIFIEMYFILTSLWGY-MYYXXXXXXXXXXXXXXXXXXXXXIVAVY-----TNYHWQWVAFLSAGSTAIYVFLYAVYYFGFHTQQKGFLQVSFYFGYMGLFCAALAAMCGSIGVLGSTVFVKQIYRNIKVD 705
+WQ+TML +++L P V+ V+ LN++A Y+T + + N+ LIW+F+SFPL V G++FGRHWGGK FPCRVN+ PR +PEA WYA V+ GLLPFGSIFIEMYFI TS W Y +Y +VAVY N+ WQW++F +AGSTA+YVF YAVYYF F T KGFLQV+FYFGYM +FC L +CG++GV GS FV+ IY NIKVD
Sbjct: 237 KWQQTMLFTILLFPGVIVGVVSFLNIIAMSYSTSNVLSFTVVANLFLIWIFISFPLAVIGTLFGRHWGGKNTFPCRVNTYPRDLPEATPWYAKWYFVIPATGLLPFGSIFIEMYFIFTSFWNYNKFYYVYGFMLLVYLILMVVTICTTVVAVYFVLNAENHKWQWLSFNAAGSTAVYVFAYAVYYFYFKTSMKGFLQVAFYFGYMSVFCIGLYILCGTVGVAGSMAFVRTIYMNIKVD 474
BLAST of mRNA_A-nodosum_M_contig1033.25.5 vs. uniprot
Match: A0A1V9ZBI9_9STRA (Transmembrane 9 superfamily member n=2 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9ZBI9_9STRA) HSP 1 Score: 244 bits (622), Expect = 1.890e-68 Identity = 117/235 (49.79%), Postives = 150/235 (63.83%), Query Frame = 1
Query: 16 WQKTMLLSVILMPSVLFPVMFLLNLVAGHYNTVTAVPLKAMVNMVLIWMFVSFPLGVAGSIFGRHWGGKANFPCRVNSIPRQIPEAAWYANPTLVVMVAGLLPFGSIFIEMYFILTSLWGYMYYXXXXXXXXXXXXXXXXXXXXXIVAVY-----TNYHWQWVAFLSAGSTAIYVFLYAVYYFGFHTQQKGFLQVSFYFGYMGLFCAALAAMCGSIGVLGSTVFVKQIYRNIKVD 705
W K M+LS+ L+PSV+F +F +N ++ Y T A+P +V ++L+W FVS PL V G+I GRH K FPCRVN PR++PEA WY P ++M+ G+LPFGSIFIEMYFI S W Y +Y IV Y NYHW W +FL++GSTAIYVF+YA+Y++ F T GFLQ FYFGYMGLFC A MCG+IG GS+ F K+IYRNIK++
Sbjct: 371 WIKAMILSISLLPSVIFVSLFFINAISVAYGTTYAIPFVTIVQVILVWFFVSCPLSVLGTILGRHGAAKRGFPCRVNKFPREVPEARWYLRPAALIMLTGVLPFGSIFIEMYFIFASFWNYKFYYVYGFMLLVFLILTVVTLCVTIVCTYFLLNSENYHWHWTSFLASGSTAIYVFIYAIYFYFFKTNMSGFLQTCFYFGYMGLFCFAFYIMCGTIGYFGSSTFTKRIYRNIKIE 605
BLAST of mRNA_A-nodosum_M_contig1033.25.5 vs. uniprot
Match: A0A067BM17_SAPPC (Transmembrane 9 superfamily member (Fragment) n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BM17_SAPPC) HSP 1 Score: 238 bits (608), Expect = 7.550e-68 Identity = 117/235 (49.79%), Postives = 148/235 (62.98%), Query Frame = 1
Query: 16 WQKTMLLSVILMPSVLFPVMFLLNLVAGHYNTVTAVPLKAMVNMVLIWMFVSFPLGVAGSIFGRHWGGKANFPCRVNSIPRQIPEAAWYANPTLVVMVAGLLPFGSIFIEMYFILTSLWGYMYYXXXXXXXXXXXXXXXXXXXXXIVAVY-----TNYHWQWVAFLSAGSTAIYVFLYAVYYFGFHTQQKGFLQVSFYFGYMGLFCAALAAMCGSIGVLGSTVFVKQIYRNIKVD 705
W K M+LS+ L+PSV+F +F +N ++ Y T A+P +V ++L+W FVS PL V G+I GRH K FPCRVN PR++PEA WY P ++ ++ G+LPFGSIFIEMYFI S W Y +Y IV Y NYHW W +FLSAGSTA+YVF YA+Y++ T GFLQ FYFGYMGLFC A MCGSIG GS+ F K+IYRNIK++
Sbjct: 233 WIKAMVLSIALLPSVVFVSLFFINALSVAYGTTYAIPFVTIVQVILVWFFVSCPLSVLGTILGRHGAAKKGFPCRVNKFPREVPEARWYLRPVVLGLLTGILPFGSIFIEMYFIFASFWNYKFYYVYGFMLLVFLILSVVTVCVTIVCTYFLLNSENYHWHWTSFLSAGSTALYVFAYAIYFYFCKTNMSGFLQTCFYFGYMGLFCFAFFIMCGSIGYYGSSAFTKRIYRNIKIE 467
BLAST of mRNA_A-nodosum_M_contig1033.25.5 vs. uniprot
Match: A0A444E945_ENSVE (Transmembrane 9 superfamily member n=1 Tax=Ensete ventricosum TaxID=4639 RepID=A0A444E945_ENSVE) HSP 1 Score: 227 bits (578), Expect = 1.820e-66 Identity = 110/231 (47.62%), Postives = 147/231 (63.64%), Query Frame = 1
Query: 28 MLLSVILMPSVLFPVMFLLNLVAGHYNTVTAVPLKAMVNMVLIWMFVSFPLGVAGSIFGRHWGGKANFPCRVNSIPRQIPEAAWYANPTLVVMVAGLLPFGSIFIEMYFILTSLWGYMYYXXXXXXXXXXXXXXXXXXXXXIVAVY-----TNYHWQWVAFLSAGSTAIYVFLYAVYYFGFHTQQKGFLQVSFYFGYMGLFCAALAAMCGSIGVLGSTVFVKQIYRNIKVD 705
M+L+ L P + F + F+LN +A Y ++ A+P MV + +IW F+SFPL + G++ GR+W G N PCRV +IPR IPE WY P+++ ++ GLLPFGSIFIEMYF+ TS W Y Y IV Y NYHWQW +F SA STA+YV+LY+VYY+ T+ GF Q SFYFGY+ +FC L +CG++G LGST+FV++IYRNIK D
Sbjct: 1 MILAASLFPFMCFGIGFILNTIAIFYGSLAAIPFGTMVVVFIIWAFISFPLALLGTVVGRNWSGSPNNPCRVKTIPRPIPEKKWYLTPSIISLMGGLLPFGSIFIEMYFVFTSFWNYKVYYVYGFMLLVFLILIIVTMCVTIVGTYFLLNAENYHWQWTSFFSAASTAVYVYLYSVYYYYMKTKMSGFFQTSFYFGYILMFCLGLGILCGAVGYLGSTLFVRRIYRNIKCD 231
BLAST of mRNA_A-nodosum_M_contig1033.25.5 vs. uniprot
Match: A0A427A5K3_ENSVE (Transmembrane 9 superfamily member n=1 Tax=Ensete ventricosum TaxID=4639 RepID=A0A427A5K3_ENSVE) HSP 1 Score: 226 bits (576), Expect = 3.560e-66 Identity = 110/231 (47.62%), Postives = 146/231 (63.20%), Query Frame = 1
Query: 28 MLLSVILMPSVLFPVMFLLNLVAGHYNTVTAVPLKAMVNMVLIWMFVSFPLGVAGSIFGRHWGGKANFPCRVNSIPRQIPEAAWYANPTLVVMVAGLLPFGSIFIEMYFILTSLWGYMYYXXXXXXXXXXXXXXXXXXXXXIVAVY-----TNYHWQWVAFLSAGSTAIYVFLYAVYYFGFHTQQKGFLQVSFYFGYMGLFCAALAAMCGSIGVLGSTVFVKQIYRNIKVD 705
M+L+ L P + F + F+LN +A Y ++ A+P MV + +IW F+SFPL + G++ GR+W G N PCRV +IPR IPE WY P+++ ++ GLLPFGSIFIEMYF+ TS W Y Y IV Y NYHWQW +F SA STA+YV+LY+VYY+ T+ GF Q SFYFGY +FC L +CG++G LGST+FV++IYRNIK D
Sbjct: 1 MILAASLFPFMCFGIGFILNTIAIFYGSLAAIPFGTMVVVFIIWAFISFPLALLGTVVGRNWSGSPNNPCRVKTIPRPIPEKKWYLTPSIISLMGGLLPFGSIFIEMYFVFTSFWNYKVYYVYGFMLLVFLILIIVTMCVTIVGTYFLLNAENYHWQWTSFFSAASTAVYVYLYSVYYYYMKTKMSGFFQTSFYFGYTLMFCLGLGILCGAVGYLGSTLFVRRIYRNIKCD 231 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1033.25.5 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1033.25.5 >prot_A-nodosum_M_contig1033.25.5 ID=prot_A-nodosum_M_contig1033.25.5|Name=mRNA_A-nodosum_M_contig1033.25.5|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=233bp MQWQKTMLLSVILMPSVLFPVMFLLNLVAGHYNTVTAVPLKAMVNMVLIWback to top mRNA from alignment at A-nodosum_M_contig1033:140675..146086+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig1033.25.5 ID=mRNA_A-nodosum_M_contig1033.25.5|Name=mRNA_A-nodosum_M_contig1033.25.5|organism=Ascophyllum nodosum dioecious|type=mRNA|length=5412bp|location=Sequence derived from alignment at A-nodosum_M_contig1033:140675..146086+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig1033:140675..146086+ >mRNA_A-nodosum_M_contig1033.25.5 ID=mRNA_A-nodosum_M_contig1033.25.5|Name=mRNA_A-nodosum_M_contig1033.25.5|organism=Ascophyllum nodosum dioecious|type=CDS|length=699bp|location=Sequence derived from alignment at A-nodosum_M_contig1033:140675..146086+ (Ascophyllum nodosum dioecious)back to top |