mRNA_A-nodosum_M_contig1030.18.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_A-nodosum_M_contig1030.18.1
Unique Name	mRNA_A-nodosum_M_contig1030.18.1
Type	mRNA
Organism	Ascophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))

Homology

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BLAST of mRNA_A-nodosum_M_contig1030.18.1 vs. uniprot
Match: D7FW17_ECTSI (ADP/ATP translocase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FW17_ECTSI)

HSP 1 Score: 419 bits (1077), Expect = 9.500e-139
Identity = 196/265 (73.96%), Postives = 233/265 (87.92%), Query Frame = 1

Query:    1 RMKLLLQVQHVHTDISPERRYKGLVDCLQRVYNESGILSFWRGNTVNVVRHIPTQALNFSLKERFRSLY-LTGVPINHFWTFLSLSLLSGASAGAISLAVLYPLDFARTRVGTDVRASGSRQFKGSIDCLRQTYSREGMRGMYRGFDIALVGTVTWRALYFGLYDTLTTRFLGGRQGGTLQQRWGIAQVVTSAAGTLVYPIDSVRRRMMMEAGRPQRMYTSSFHCIQSVLATEGFRGFYRGLSANLLRGVGTSALLVMYDEIRVM 792
            R KLLLQVQ VHTDI PERRY GL DC++RVY E G+LSFWRGNTVN+ RHIP+QALNFSL++RFR L+ L  VPI+HFW FL LS+LSGAS+GA+ L+VLYPLDFARTRVGTDVR+SG+RQF+GS+DCLRQ YS  G+RG+YRGFD+A++G   WRALYFGLYDT TTR LGGRQGGTLQ+RW +AQ+ TS AGT++YPIDSVRRRMMME GR +RMY SSFHC ++++ATEG+RGFYRGLSANL+RG+GTS LLV+YDEIR +
Sbjct:   44 RAKLLLQVQWVHTDIPPERRYNGLSDCIRRVYKEQGLLSFWRGNTVNIARHIPSQALNFSLRDRFRELFGLDTVPIDHFWKFLGLSMLSGASSGAVCLSVLYPLDFARTRVGTDVRSSGNRQFRGSLDCLRQAYSTVGLRGIYRGFDVAVLGVGAWRALYFGLYDTFTTRLLGGRQGGTLQERWAVAQMATSTAGTIIYPIDSVRRRMMMETGRKERMYKSSFHCFRTMVATEGYRGFYRGLSANLIRGMGTSILLVLYDEIRAL 308

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BLAST of mRNA_A-nodosum_M_contig1030.18.1 vs. uniprot
Match: A0A836CGY1_9STRA (ADP/ATP translocase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGY1_9STRA)

HSP 1 Score: 321 bits (822), Expect = 1.100e-100
Identity = 155/267 (58.05%), Postives = 193/267 (72.28%), Query Frame = 1

Query:    1 RMKLLLQVQHVHTDISPERRYKGLVDCLQRVYNESGILSFWRGNTVNVVRHIPTQALNFSLKERFRSLYLTGVPI--NHFWTFLSLSLLSGASAGAISLAVLYPLDFARTRVGTDVRASGSRQFKGSIDCLRQTYSREGMRGMYRGFDIALVGTVTWRALYFGLYDTLTTR-FLGGRQGGTLQQRWGIAQVVTSAAGTLVYPIDSVRRRMMMEAGRPQRMYTSSFHCIQSVLATEGFRGFYRGLSANLLRGVGTSALLVMYDEIRVM 792
            R+KLLLQVQH  T I+P  RYKG+ DC +RVY E G+LSFWRGN  NV R+ P QALNF++ +RFR  +L+  P     FW +L+ S+  G +AGA SL VLYP DFARTRVG DV     R + GS+DCLR+    EG RG++RGFD ALVG   WR LYFG YD    R F G R+GGT+ QRW +AQ VT+AAGT VYP+D++RRRMMM+AGR   +Y  S+HC ++V   EG RGFYRGLSANL+RGVG + +LV++DEIRV+
Sbjct:   40 RVKLLLQVQHASTQIAPHERYKGMSDCFKRVYKEQGLLSFWRGNLANVTRYFPGQALNFTIWDRFRDAFLSDAPAAQTDFWRYLARSVAVGGAAGAASLVVLYPFDFARTRVGVDVGVGAQRLYAGSVDCLRRVVRAEGWRGVFRGFDAALVGVFAWRGLYFGCYDAALVRAFAGDRRGGTVAQRWLLAQAVTTAAGTAVYPLDTLRRRMMMQAGRADVLYAGSWHCARTVAREEGVRGFYRGLSANLVRGVGGALMLVLFDEIRVL 306

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BLAST of mRNA_A-nodosum_M_contig1030.18.1 vs. uniprot
Match: K3WRK9_GLOUD (ADP/ATP translocase n=2 Tax=Eukaryota TaxID=2759 RepID=K3WRK9_GLOUD)

HSP 1 Score: 268 bits (684), Expect = 3.700e-80
Identity = 126/262 (48.09%), Postives = 177/262 (67.56%), Query Frame = 1

Query:    1 RMKLLLQVQHVHTDISPERRYKGLVDCLQRVYNESGILSFWRGNTVNVVRHIPTQALNFSLKERFRSLYLTGVPINHFWTFLSLSLLSGASAGAISLAVLYPLDFARTRVGTDVRASGSRQFKGSIDCLRQTYSREGMRGMYRGFDIALVGTVTWRALYFGLYDTLTTRFLGGRQGGTLQQRWGIAQVVTSAAGTLVYPIDSVRRRMMMEAGRPQRMYTSSFHCIQSVLATEGFRGFYRGLSANLLRGVGTSALLVMYDEIR 786
            R+KLLLQVQ V + I PE +YKG+VDC  RV  E G+ SFWRGN  NV+R+ PTQALNF+ K++++ L+L GV  + FW F   +L SG +AGA SL  +YPLDFARTR+  DV    SR + G  +C+   Y  +G RG+Y+GF +++ G + +RA +FG YDTL    L   +   + Q+W +AQVVT+ AG + YP D+VRRRMMM+AGR + +YTS+  C   +L  EG   F++G  +N++RG G + +LV+YDE +
Sbjct:   45 RVKLLLQVQAVSSQIKPEDQYKGIVDCFVRVSKEQGVASFWRGNLANVIRYFPTQALNFAFKDKYKKLFLDGVKKDQFWRFFMGNLASGGAAGATSLLFVYPLDFARTRLAADVGKGKSRMYTGLANCISTIYKADGARGLYQGFGVSVGGIIVYRAAFFGGYDTLRDVALADPKNAPVWQKWLVAQVVTTVAGIVSYPFDTVRRRMMMQAGRKEILYTSTIDCATKILKKEGGGAFFKGAGSNIIRGTGGAIVLVLYDEFK 306

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BLAST of mRNA_A-nodosum_M_contig1030.18.1 vs. uniprot
Match: A0A067C9Y2_SAPPC (ADP/ATP translocase n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067C9Y2_SAPPC)

HSP 1 Score: 267 bits (682), Expect = 7.510e-80
Identity = 125/264 (47.35%), Postives = 175/264 (66.29%), Query Frame = 1

Query:    1 RMKLLLQVQHVHTDISPERRYKGLVDCLQRVYNESGILSFWRGNTVNVVRHIPTQALNFSLKERFRSLYLTGVPINHFWTFLSLSLLSGASAGAISLAVLYPLDFARTRVGTDVRASGSRQFKGSIDCLRQTYSREGMRGMYRGFDIALVGTVTWRALYFGLYDTLTTRFLGGRQGGTLQQRWGIAQVVTSAAGTLVYPIDSVRRRMMMEAGRPQRMYTSSFHCIQSVLATEGFRGFYRGLSANLLRGVGTSALLVMYDEIRVM 792
            R+KLLLQVQ   T I     Y G+++C  RV  E G+ SFWRGN  NV+R+ PTQALNF+ K++++ L+L GV  + FW F   +L SG +AGA SL  +YPLDFARTR+G DV    SRQ+ G +DC+ + Y  +G +G+Y GF +++ G + +RA +FG YDT     +   +   + Q+W +AQVVT+ AG L YP D+VRRRMMM+AGR   MYTS+ HC   ++  EG   F++G  +N++RG G + +LVMYDE + M
Sbjct:   48 RVKLLLQVQAASTQIKDP--YTGIINCFTRVAKEQGVSSFWRGNAANVIRYFPTQALNFAFKDKYKKLFLDGVKKDQFWRFFMGNLASGGAAGATSLLFVYPLDFARTRLGADVGVGKSRQYNGLVDCITKVYKSDGAKGLYGGFGVSVGGIIVYRAAFFGGYDTFRDILIADPKNAPIWQKWAVAQVVTTFAGILSYPFDTVRRRMMMQAGRADIMYTSTLHCWGKIMKDEGAGAFFKGAGSNIIRGTGGALVLVMYDEFKAM 309

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BLAST of mRNA_A-nodosum_M_contig1030.18.1 vs. uniprot
Match: H3G8S2_PHYRM (ADP/ATP translocase n=21 Tax=Peronosporaceae TaxID=4777 RepID=H3G8S2_PHYRM)

HSP 1 Score: 266 bits (679), Expect = 1.550e-79
Identity = 125/264 (47.35%), Postives = 175/264 (66.29%), Query Frame = 1

Query:    1 RMKLLLQVQHVHTDISPERRYKGLVDCLQRVYNESGILSFWRGNTVNVVRHIPTQALNFSLKERFRSLYLTGVPINHFWTFLSLSLLSGASAGAISLAVLYPLDFARTRVGTDVRASGSRQFKGSIDCLRQTYSREGMRGMYRGFDIALVGTVTWRALYFGLYDTLTTRFLGGRQGGTLQQRWGIAQVVTSAAGTLVYPIDSVRRRMMMEAGRPQRMYTSSFHCIQSVLATEGFRGFYRGLSANLLRGVGTSALLVMYDEIRVM 792
            R+KLLLQVQ   + I PE +YKG+VDC  RV  E G+ S WRGN  NV+R+ PTQALNF+ K++F+ +++ GV    FW F   +L SG +AGA SL  +YPLDFARTR+G DV    SR + G ++C+   Y  +G+ G+Y+GF +++ G + +RA +FG YDTL    L   +   + Q+W +AQ VTS AG + YP D+VRRRMMM+AGR   +YTS+  C   +L  EG   F++G  +N+LRG G + +LV+YDE + M
Sbjct:   45 RVKLLLQVQAASSQIKPEDQYKGIVDCFVRVSKEQGVNSLWRGNLANVIRYFPTQALNFAFKDKFKKIFMDGVTKEQFWRFFMGNLASGGAAGATSLLFVYPLDFARTRLGADVGKGKSRMYTGLVNCVSTIYKSDGLGGLYQGFGVSVGGIIVYRAAFFGGYDTLRDIALKDPKNAPVWQKWMVAQTVTSLAGMISYPFDTVRRRMMMQAGRKDILYTSTMDCASKILKNEGSGAFFKGAGSNILRGTGGAIVLVLYDEFKKM 308

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BLAST of mRNA_A-nodosum_M_contig1030.18.1 vs. uniprot
Match: A0A1B6GAA5_9HEMI (ADP/ATP translocase n=2 Tax=Proconiini TaxID=565685 RepID=A0A1B6GAA5_9HEMI)

HSP 1 Score: 263 bits (672), Expect = 1.600e-78
Identity = 128/266 (48.12%), Postives = 186/266 (69.92%), Query Frame = 1

Query:    1 RMKLLLQVQHVHTDISPERRYKGLVDCLQRVYNESGILSFWRGNTVNVVRHIPTQALNFSLKERFRSLYLTGVPIN-HFWTFLSLSLLSGASAGAISLAVLYPLDFARTRVGTDV-RASGSRQFKGSIDCLRQTYSREGMRGMYRGFDIALVGTVTWRALYFGLYDTLTTRFLGGRQGGTLQQRWGIAQVVTSAAGTLVYPIDSVRRRMMMEAGRPQ--RMYTSSFHCIQSVLATEGFRGFYRGLSANLLRGVGTSALLVMYDEIR 786
            R+KLLLQVQH+   I+ ++RYKG+VDC  R+  E G+L++WRGN  NV+R+ PTQALNF+ K++++ ++L GV  N  FW + + +L SG +AGA SL  +YPLDFARTR+  DV ++ G+R+FKG  DCL + +  +G+ GMYRGF +++ G + +RA YFG +DT        +  G     WGIAQVVT+ AG + YP D+VRRRMMM++GR +  R YTS+ HC  ++  +EG   F++G  +N+LRG G + +LV+YDEI+
Sbjct:   41 RVKLLLQVQHISKQIAEDQRYKGMVDCFIRIPKEQGVLAYWRGNFANVIRYFPTQALNFAFKDKYKQIFLGGVDKNTQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKSGGAREFKGLGDCLSKIFKSDGLVGMYRGFGVSVQGIIIYRASYFGCFDTAKGMLPDPKNAGFFVS-WGIAQVVTTVAGIVSYPFDTVRRRMMMQSGRAKADRTYTSTAHCWVTIAKSEGSAAFFKGAFSNVLRGTGGALVLVLYDEIK 305

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BLAST of mRNA_A-nodosum_M_contig1030.18.1 vs. uniprot
Match: A0A0L0T058_ALLM3 (ADP/ATP translocase n=1 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0T058_ALLM3)

HSP 1 Score: 262 bits (669), Expect = 5.000e-78
Identity = 124/264 (46.97%), Postives = 176/264 (66.67%), Query Frame = 1

Query:    1 RMKLLLQVQHVHTDISPERRYKGLVDCLQRVYNESGILSFWRGNTVNVVRHIPTQALNFSLKERFRSLYLTGVPINHFWTFLSLSLLSGASAGAISLAVLYPLDFARTRVGTDVRASGSRQFKGSIDCLRQTYSREGMRGMYRGFDIALVGTVTWRALYFGLYDTLTTRFLGGRQGGTLQQRWGIAQVVTSAAGTLVYPIDSVRRRMMMEAGRPQRMYTSSFHCIQSVLATEGFRGFYRGLSANLLRGVGTSALLVMYDEIRVM 792
            R+KLLLQVQ   T I+ +++YKG++D  +R+  E G  SFWRGN  NV+R+ PTQALNF+ K++++ L++   P   FW F + +L SG +AGA SL  +YPLDFARTR+G DV    +RQF G   C+   Y ++G +G+YRGF +++ G + +RA +FG YDT    FL   +     Q W IAQVVT+ AG + YP D+VRRRMMM+AGR   +YTS+  C + +   EG R F++G  +N +RG G + +LV+YDEI+ M
Sbjct:   40 RVKLLLQVQAASTQIAADQQYKGIMDAFRRIPAEQGFSSFWRGNLANVIRYFPTQALNFAFKDKYKKLFVRHNPKTDFWKFFAGNLASGGAAGATSLLFVYPLDFARTRLGADVGKGDARQFNGLAHCISTIYKQDGAKGLYRGFGVSVFGIIVYRAAFFGGYDTAKAMFLKDPKSAPFWQNWMIAQVVTTMAGVISYPFDTVRRRMMMQAGRADILYTSTLDCWKKIAVNEGPRAFFKGALSNAIRGSGGALVLVIYDEIQKM 303

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BLAST of mRNA_A-nodosum_M_contig1030.18.1 vs. uniprot
Match: A0A067CHF4_SAPPC (ADP/ATP translocase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CHF4_SAPPC)

HSP 1 Score: 261 bits (667), Expect = 5.710e-78
Identity = 127/265 (47.92%), Postives = 179/265 (67.55%), Query Frame = 1

Query:    1 RMKLLLQVQHVHTDISPERRYKGLVDCLQRVYNESGILSFWRGNTVNVVRHIPTQALNFSLKERFRSLYLTGVPINHFWTFLSLSLLSGASAGAISLAVLYPLDFARTRVGTDVRASGSRQFKGSIDCLRQTYSREGMRGMYRGFDIALVGTVTWRALYFGLYDTLTTRFLGGRQGGTLQQRWGIAQVVTSAAGTLVYPIDSVRRRMMMEAGRPQRMYTSSFHCIQSVLATEGFRGFYRGLSANLLRGVGTSALLVMYDEIRVMF 795
            R+KLLLQVQ   T I+    Y G++DCL R+  E G+ S WRGN  NV+R+ PTQA NF+LK++++  +L GV  + FW F   +L +G +AGA +LA +YPLDFARTR+G DV    SR + G +DCL + Y  +G +G+YRGF +++ G V +RA +FG YDT     +G      L Q+W  AQVV++ AG + YP D+VRRRMMM+AGR   +YTS+ HC   +L  EG   F++G  +N+LRG G++ LLV+YDE++V+F
Sbjct:   34 RVKLLLQVQATSTQITTP--YTGILDCLTRLTKEQGVASLWRGNGANVIRYFPTQAFNFALKDKYKDFFLRGVQKDQFWPFFVGNLAAGGAAGATTLAFVYPLDFARTRLGADVGVGKSRLYTGLVDCLSKIYKSDGAKGLYRGFSVSVGGIVVYRAAFFGGYDTCRDVVVGPT--APLWQKWIAAQVVSTGAGFVAYPFDTVRRRMMMQAGRTDVLYTSTLHCWGKMLQDEGASAFFKGAGSNVLRGTGSALLLVLYDELKVLF 294

[Close]

BLAST of mRNA_A-nodosum_M_contig1030.18.1 vs. uniprot
Match: A0A2D4CCG0_PYTIN (ADP/ATP translocase n=3 Tax=Pythium TaxID=4797 RepID=A0A2D4CCG0_PYTIN)

HSP 1 Score: 261 bits (668), Expect = 8.460e-78
Identity = 125/264 (47.35%), Postives = 176/264 (66.67%), Query Frame = 1

Query:    1 RMKLLLQVQHVHTDISPERRYKGLVDCLQRVYNESGILSFWRGNTVNVVRHIPTQALNFSLKERFRSLYLTGVPINHFWTFLSLSLLSGASAGAISLAVLYPLDFARTRVGTDVRASGSRQFKGSIDCLRQTYSREGMRGMYRGFDIALVGTVTWRALYFGLYDTLTTRFLGGRQGGTLQQRWGIAQVVTSAAGTLVYPIDSVRRRMMMEAGRPQRMYTSSFHCIQSVLATEGFRGFYRGLSANLLRGVGTSALLVMYDEIRVM 792
            R+KLLLQVQ   T I PE +YKG+VDC  RV  E G+ SFWRGN  NV+R+ PTQALNF+ K++++ L+L GV  + FW F   +L SG +AGA SL  +YPLDFARTR+  DV    SR + G  +C+   Y  +G++G+Y+GF +++ G + +RA +FG YDTL    L   +   + Q+W +AQ VT+ AG + YP D+VRRRMMM+AGR   +YTS+  C   +L  EG   F++G  +N++RG G + +LV+YDE + M
Sbjct:   45 RVKLLLQVQAASTQIKPEDQYKGIVDCFVRVSKEQGVGSFWRGNLANVIRYFPTQALNFAFKDKYKKLFLDGVKKDQFWRFFMGNLASGGAAGATSLLFVYPLDFARTRLAADVGKGKSRLYTGLGNCITTIYKSDGLKGLYQGFGVSVGGIIVYRAAFFGGYDTLRDVALKDPKTAPVWQKWLVAQTVTTIAGIVSYPFDTVRRRMMMQAGRSDILYTSTLDCAVKILKNEGPNAFFKGAGSNIIRGTGGAIVLVLYDEFKRM 308

[Close]

BLAST of mRNA_A-nodosum_M_contig1030.18.1 vs. uniprot
Match: A0A1B6DAI9_9HEMI (ADP/ATP translocase n=2 Tax=Clastoptera arizonana TaxID=38151 RepID=A0A1B6DAI9_9HEMI)

HSP 1 Score: 261 bits (667), Expect = 8.640e-78
Identity = 128/266 (48.12%), Postives = 185/266 (69.55%), Query Frame = 1

Query:    1 RMKLLLQVQHVHTDISPERRYKGLVDCLQRVYNESGILSFWRGNTVNVVRHIPTQALNFSLKERFRSLYLTGVPIN-HFWTFLSLSLLSGASAGAISLAVLYPLDFARTRVGTDV-RASGSRQFKGSIDCLRQTYSREGMRGMYRGFDIALVGTVTWRALYFGLYDTLTTRFLGGRQGGTLQQRWGIAQVVTSAAGTLVYPIDSVRRRMMMEAGRPQR--MYTSSFHCIQSVLATEGFRGFYRGLSANLLRGVGTSALLVMYDEIR 786
            R+KLLLQVQH+   I PE+RYKG+VDC  R+  E G++++WRGN  NV+R+ PTQALNF+ K++++ ++L GV  N  FW + + +L SG +AGA SL  +YPLDFARTR+  DV + SG R+FKG  DCL + +  +GM G+YRGF +++ G + +RA YFG +DT        +  G L   W IAQVVT+ AG + YP D+VRRRMMM++GR +   +YTS+ +C  +++  EG   F++G  +N+LRG G + +LV+YDEI+
Sbjct:   41 RVKLLLQVQHISKQIPPEQRYKGMVDCFIRIPKEQGVVAYWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKNTQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGSGQREFKGLGDCLSKIFKSDGMVGLYRGFGVSVQGIIIYRASYFGCFDTAKGMLPDPKNAGFLLS-WAIAQVVTTVAGIVSYPFDTVRRRMMMQSGRAKSEVIYTSTANCWATIMKQEGSGAFFKGAFSNVLRGTGGALVLVLYDEIK 305

The following BLAST results are available for this feature:

BLAST of mRNA_A-nodosum_M_contig1030.18.1 vs. uniprot

BLAST of mRNA_A-nodosum_M_contig1030.18.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25

ZOOM

x 1

POSITION

0


Match Name	E-value	Identity	Description
D7FW17_ECTSI	9.500e-139	73.96	ADP/ATP translocase n=2 Tax=Ectocarpus TaxID=2879 ...	[more]
A0A836CGY1_9STRA	1.100e-100	58.05	ADP/ATP translocase n=1 Tax=Tribonema minus TaxID=...	[more]
K3WRK9_GLOUD	3.700e-80	48.09	ADP/ATP translocase n=2 Tax=Eukaryota TaxID=2759 R...	[more]
A0A067C9Y2_SAPPC	7.510e-80	47.35	ADP/ATP translocase n=3 Tax=Saprolegniaceae TaxID=...	[more]
H3G8S2_PHYRM	1.550e-79	47.35	ADP/ATP translocase n=21 Tax=Peronosporaceae TaxID...	[more]
A0A1B6GAA5_9HEMI	1.600e-78	48.12	ADP/ATP translocase n=2 Tax=Proconiini TaxID=56568...	[more]
A0A0L0T058_ALLM3	5.000e-78	46.97	ADP/ATP translocase n=1 Tax=Allomyces macrogynus (...	[more]
A0A067CHF4_SAPPC	5.710e-78	47.92	ADP/ATP translocase n=2 Tax=Saprolegnia TaxID=4769...	[more]
A0A2D4CCG0_PYTIN	8.460e-78	47.35	ADP/ATP translocase n=3 Tax=Pythium TaxID=4797 Rep...	[more]
A0A1B6DAI9_9HEMI	8.640e-78	48.12	ADP/ATP translocase n=2 Tax=Clastoptera arizonana ...	[more]

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Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_A-nodosum_M_contig1030.18.1	prot_A-nodosum_M_contig1030.18.1	Ascophyllum nodosum dioecious	polypeptide	A-nodosum_M_contig1030 114588..120274 -

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680866397.8972936-UTR-A-nodosum_M_contig1030:113212..114587	1680866397.8972936-UTR-A-nodosum_M_contig1030:113212..114587	Ascophyllum nodosum dioecious	UTR	A-nodosum_M_contig1030 113213..114587 -
1680866398.0689554-UTR-A-nodosum_M_contig1030:120274..120277	1680866398.0689554-UTR-A-nodosum_M_contig1030:120274..120277	Ascophyllum nodosum dioecious	UTR	A-nodosum_M_contig1030 120275..120277 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680866397.9574811-CDS-A-nodosum_M_contig1030:114587..114810	1680866397.9574811-CDS-A-nodosum_M_contig1030:114587..114810	Ascophyllum nodosum dioecious	CDS	A-nodosum_M_contig1030 114588..114810 -
1680866397.9677134-CDS-A-nodosum_M_contig1030:115067..115243	1680866397.9677134-CDS-A-nodosum_M_contig1030:115067..115243	Ascophyllum nodosum dioecious	CDS	A-nodosum_M_contig1030 115068..115243 -
1680866397.9757862-CDS-A-nodosum_M_contig1030:115701..115918	1680866397.9757862-CDS-A-nodosum_M_contig1030:115701..115918	Ascophyllum nodosum dioecious	CDS	A-nodosum_M_contig1030 115702..115918 -
1680866397.9836822-CDS-A-nodosum_M_contig1030:116494..116580	1680866397.9836822-CDS-A-nodosum_M_contig1030:116494..116580	Ascophyllum nodosum dioecious	CDS	A-nodosum_M_contig1030 116495..116580 -
1680866397.9938498-CDS-A-nodosum_M_contig1030:116988..117001	1680866397.9938498-CDS-A-nodosum_M_contig1030:116988..117001	Ascophyllum nodosum dioecious	CDS	A-nodosum_M_contig1030 116989..117001 -
1680866398.0019548-CDS-A-nodosum_M_contig1030:120185..120274	1680866398.0019548-CDS-A-nodosum_M_contig1030:120185..120274	Ascophyllum nodosum dioecious	CDS	A-nodosum_M_contig1030 120186..120274 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at A-nodosum_M_contig1030:113213..120277-
coding sequence from alignment at A-nodosum_M_contig1030:113213..120277-

protein sequence of mRNA_A-nodosum_M_contig1030.18.1

>prot_A-nodosum_M_contig1030.18.1 ID=prot_A-nodosum_M_contig1030.18.1|Name=mRNA_A-nodosum_M_contig1030.18.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=268bp
MKLLLQVQHVHTDISPERRYKGLVDCLQRVYNESGILSFWRGNTVNVVRH
IPTQALNFSLKERFRSLYLTGVPINHFWTFLSLSLLSGASAGAISLAVLY
PLDFARTRVGTDVRASGSRQFKGSIDCLRQTYSREGMRGMYRGFDIALVG
TVTWRALYFGLYDTLTTRFLGGRQGGTLQQRWGIAQVVTSAAGTLVYPID
SVRRRMMMEAGRPQRMYTSSFHCIQSVLATEGFRGFYRGLSANLLRGVGT
SALLVMYDEIRVMFSRI*

mRNA from alignment at A-nodosum_M_contig1030:113213..120277-

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_A-nodosum_M_contig1030.18.1 ID=mRNA_A-nodosum_M_contig1030.18.1|Name=mRNA_A-nodosum_M_contig1030.18.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=7065bp|location=Sequence derived from alignment at A-nodosum_M_contig1030:113213..120277- (Ascophyllum nodosum dioecious)
AGAATGAAACTTCTTCTTCAAGTTCAGCACGTGCACACCGACATCTCACC
AGAGCGTCGCTACAAGGGCCTCGTCGACTGCCTGCAGCGAGTGTACAGAG
AGCAGGCGAGAACAATCAACAAACGCAACACTTGAGCACGCACACTCAAG
CTTATCTTCTTACCGACAGTTATGTTTATTTCACTTTTTACAAAAATTGG
CCTGGGCCAGGTCGGGATGAGGAGATACCGTCTAAATCTGATAGTACGGG
GATCATCTGATGACACTTTTTCTACTGTATGATACTATTCTATACTAGTA
AATACACAAGGGGGGGGTGCTTTATGTTCCCGAGGGGGCGTTCTCAGAGA
GCTTAACGGCACCTGTTGCCGGTCTTAGTTCGAAGGGGTTAAGTGTGAAC
CGAGGAACTGTGATCAATTCCCCGGAGACCACGGGCTAGATAGGCAAGTT
TGTTCGTAGGGTTGTTACTGACTTTTAAAGCTACTACTGTTAATCGACCC
CATCGGCAAAAAGGGGGGGGGGGAATATGTCTATTGATAGCCTCTAAGTA
TGTTAAAACATAATTTTCCTGTTTTTATGCCCTCCACCGAATTTTGAAGC
TCTTACGGATGAGCGTGGTATCGTAGAAAATTCTTGCGGATAGAAAGTCC
GGAGCATGCCCTTTACAGCACTTTCATTTGATATATCTTCGCCCCAACAC
TACCTTTTGCCTCATGCAATACCTCCTATTAATACAATACCTTCGGCAAG
ACCTGGTACAGAGTACACAAGCAGCACCTGAATTCAATCTCTGGGAGCTG
GTCTTACAGTAAGTCGAACGTTGCCCAACCCTGGCTGACTCCAACCACGG
TAACTTTCAGCGATTGTGCACTGGTCTGGACAAATGTTCAGTCAGAGAGG
TGCTCGGAAGAATGGAGTTGACAGCGTCATGTCAAGTACGAGAAATGTGT
GGAGCGTGCTCCCCGTGTGTGCACGCGCCGAAGCTATGACCCCAACGATC
TGACCGTCGGTAAGGCGGGCCTGCGACTATTGTTTAAAGATAAATCCAGA
TTGTGTTGAGTCGAGTACTACTCATGGCGTACTCGAGTATTCTACTCGAG
TATGTACTCGACTCAACATACTCATAGCTTGAGTACCGCTTTCCATACTC
TACTCAACATACTCATAGCTTGAGTACCGCTTTCCATACTCGACTCAAAA
TACTCAAAGCTTGAGTACCGCTTTCCATACTCTACTCGAGTATGAGTACG
GTATCGGGCAAATACTCAACGATGAGTCGAGTATCGAGTATGACTTTCCA
TACTCGACTCAAAATACTCAAAGCTTGAGTACAACTTCCCATACTCGACT
CAAAATACTCAAAGCTTGAGTACAACTTCCCATACTCGACTCAACATACT
CATAGCTTGAGTACAACTTTCCATACTCTACTCGAGTATGAGTACGGTAT
CGGGCAAATACTCAACGATGAGTCGAGTATCGAGTATGACTTTCCATACT
CGACTCAAAAATACTCAAAGCTTGAGTATGACTTTCCATACTCGACTCAA
AGTACTCAATACTCTGCTCAAGTTTGAGTACATGCCTTCGTCTTCGTGAC
GTCATTCTGCGGGGCATTTTGTATCCAGACATTGTGTAAAGTAGTTTTTT
CGGGTTGGCAACCAATACGCTGAATGTGAAAAACAACAACAACATCTTTT
TTTTTTTTCTTTTCTTTTCTTTTCTTTTCTGGTGTCCCTGCATGGCGATT
AATGTAAGTGTACAGTATAACGGTGGGCTTCTCCCCGACATTACTGGGTG
GAAATGGTGATGTTCCTGAAGGCGAACTACAGCTCCATTCCGGCGTACAA
GGACATCCCCAGATCGCATCGGAGGACATCCGCAATCACCTCCCGCGAGG
TTCGACGGACAGGACAAGGATCTTCTGGACGCAGAGGCGTCGATTGACCC
GCTGGTCAACAACGCGCCTCCCACTCCCAGTGGCATAGACATCAACTAGG
ACATGCGTAGGGCAGCTAGTTGTTTTGTTTTTTGTTTCGTACTGCTTTTG
CGGTCGTGCAATATCAAAATTACTACCATAGAAAGTATAGTATTTTGTTT
TTTATATCTCTTTTGCTATATATTAGTGATTAGTGCGAGTGCTTGCAAAC
AGGCCATCGGTGGCGGTTGACAACCGACCAGGGGTGCAGCGTTCAGCCTT
TCACCGCTATGACCAACGGGGAGGGCGGGTGAAAATGCAGGGGATGAATT
GAAGTAGGGTGATATGTAGTTTAATTTTTAGTTTTTTAGGTTGTGGTGAG
AAAAGTACTACTCAACTACTCGAGTATTCTACTCGAGTATGTACTCGACT
CAACATACTCATAGCTTGAGTACCGCTTTCCATACTCTACTCAAAATACT
CATAGCTTGAGTACCGCTTTCCATACTCGACTCAAAATACTCAAAGCTTG
AGTACCGCTTTCCATACTCTACTCGAGTATGAGTACGGTATCGGGCAAAT
ACTCAACGATGAGTCGAGTATCGAGTATGACTTTCCATACTCGACTCAAA
ATACTCAAAGCTTGAGTACAACTTCCCATACTCGACTCAAAATACTCAAA
GCTTGAGTACAACTTCCCATACTCGACTCAACATACTCATAGCTTGAGTA
CAACTTTCCATACTCTACTCGAGTATGAGTACGGTATCGGGCAAAATACT
CAACGATGAGTCGAGTATCGAGTATGACTTTCCATACTCGACTCAAAATA
CTCAAAGCTTGAGTACAACTTTCCATACTCGACTCAAAATACTCAAAGCT
TGAGTACGACTTTCCATACTCGACTCAAAATACTCAAAGCTTGAGTACCG
CTTTCAATAATCTACTCTAAATACTCTACTCGACTCAGCACATATATCTG
AACGCATCTAGACCTTCTGAGCATCCCCCAATCAGGGGGAAAAATGTCAA
GACGTTTAGGTGGGATCATAGGCTGCAAATACAAAACCTTTTCATGGCAT
TTAAACAGGTTCCCCGATGGTAGTAACATTGGGTCAACAGTATAATGTCG
GGGAGAAACTCACCGTAATGCTGTACACTTACATTAATCGCCATGCAGAG
ACACCAGACAAAAACAAAACAAAAACATTTTTAGTACATTATAAAATAGG
TTTATAATGATATATACCGGAGTATACAGTAACAATGCCATTTGACCCTA
TACAATAAGGGCTTATAGTCTAGAGCACAAGCATGGTCTACTGGACAGGA
TGAGATTAGAGGAGCATCTACAAAAGCTATAACGAGAGCGTGAAAACAAA
AACAAAACACTGTTTAAGAAAAATCTGAACGCGTCTAAACCTTCTGAGCA
TCCACCTTCAGGGGGAAAATGTCTAAAGGCTTGTTGTTTTTTGTTTGTCA
CCCCCTGTCGGTTCGGAACCACAGCCATAGCCATGTTATCCTGTACTTCG
AAATCTACTTGTGGTCTTGCAGAGACAAACACGAACGGGGAAACAAACTG
TGAAAGATCGCGGATCTGGCCACTCGTCGACGCCGAACCTAAACCGATCC
ACCGTCGCACGTTCCTTTTTTCATCGTCGTAAAATAAACGAGGCATGCAT
TTTCATTTTTAACGGGGTCTGTTCCTTTGCTCCCGCTCCCTGTGTGACCT
GTGTGACCAAAACCGTCTGCCTCGGCGTCGCCTCGATGGCACCAAAGGGG
ATTTTGTCATTCTGGAGAGGGAACACCGTGAACGTGGTGAGACACATCCC
AACGCAGGCCCTCAACTTCTCCCTCAAGGAAAGGTACGCTCGACAGACGC
ATCCTGCTTCTGCCAGATTTCGCAGTTTGCTTCACGCCGCATGTCGATCG
CGTGGCCCACCCCGCGCTGCGCTGCGCTGAGGGACAGGAGGAGGGGGAGG
GGGGTTATGCCATTGTTTGTTCGTTTGTTTATACCTCACCTTCGGCCGAT
GGGCCTCAACGTGCTAGGTTACCAATCCCACCCACTGCAACGTTGCCATT
CTGCCTGTAGTCACTAAGGATATTCCCATCTCTCCCCGGTCCTCGCCCAC
GATTTTTTATCGCGATGCAAGTTCAGTGCTTACACACCTCGTCAACTAAA
TTATTGAATTTTACTGTATTAAAAGGAAATGGAGGACGACCACAAGCCTC
GGCGAGTAGAAGGCGACGGGCCAGTATCTTACTTGTGGATATCGGTCGGT
CCCGACACACATTTTCCTCCCATTCTGATCCCAGCATTTCCTCTCGGCGT
TGCCGCTTCAAATCAGCATGATTTCTTATCTTGCACGCCTTGGCTGTACT
ATTGGAGTACATCGAAAATGCTCCACGGGCGCTTCTCATTTTTCGACGCG
TTCGTACAGATTTCGATCGCTCTACCTCACCGGGGTCCCGATCAACCACT
TCTGGACCTTTCTGAGCCTGTCGCTGCTCTCCGGGGCATCGGCAGGTGCG
ATATCGCTCGCGGTTTTATATCCTCTGGACTTCGCGCGCACCAGGGTAGG
GACGGACGTTAGAGCTTCTGGGAGCCGGCAGTTCAAGGGAAGCATCGATT
GCTTGCGGCAGACGTACTCGCGCGAGGTGAGTTCGGAATGGCGTCAGATC
GTCCAGTGGCTCTAGCAATCCCCAAGACGACGTGCTGCCTAAGGTCGTGC
GGTTAGGCCCCTCTTGCTGAAGCGATCGTCAAACATTTACCGTAAGGTAT
ATATACCATATTGTCACCGAGGGGGCATTCAAGCCCTTTCTCCACTCCGA
GCACGTGAAACACAAGTGTAGCTACTATTATAATATTAATAGTGTAATGC
GACGAAACCGTCAGACTTTCTGAGCGCCAATATTATCGAATCGTTGACCT
TCCTAATCGGGATCGTCTGTCGTTACCGCCGACGATGTAGGAAGACTAGT
CGTGCGCGTAGTGAAAAACATGTCCCCTAGAGTATGCAGTGATCCTATTC
CGTCAGGTGAATTCCACGTTTATGAATCTCGCGTTGATACACGCGAGATT
TGCATGCTCCTCGCCCAATGGCACGTGTTTTCAGGGCATGAGGGGCATGT
ACCGCGGTTTTGACATCGCTCTTGTGGGAACGGTGACCTGGAGGGCGCTC
TATTTCGGCCTCTACGATACTCTTACCACGCGGTTTCTCGGGGGGAGGCA
AGGCGGCACACTCCAGCAGCGCTGGGGGATTGCCCAGGTCGTGACCTCGG
CCGCCGGAACGTGAGTACCCTTTCCATGCGAGATTATGTTGTGTTCCAGG
AGAGAGCTTCCATTTCCACCGAGGCAGCATGGCTTGATGACTTGGGCAGC
AGCTTGCGTGCGCAAGCGGTCCCCGGAAGCGCCGCCTCTTTGGATCGAAC
ACCGACTTTGTATCGCAGCTGATGTCTCAACGGATGTCTCTAAGAAAGGT
CTTAACGGACTTGTAAACGTTCGCTCCCTTACGATTTAGAAGTATCCCAA
ACCTCGCTCACCACCAGGTTGGTGTATCCGATCGACTCCGTGCGGAGGCG
CATGATGATGGAGGCTGGGAGACCTCAACGAATGTACACGAGCAGCTTCC
ACTGCATCCAAAGTGTGCTTGCGACGGAAGGGTTCAGAGGTTTCTACAGG
GGATTGTCGGCGAATCTTCTCAGGGGAGTAGGTACCTCGGCCCTGCTGGT
GATGTACGACGAAATCAGGGTGATGTTTTCTCGGATATGAAGGTCGCCAT
GCCGCAAAATGATGGTCTGCGTGAGGTGACGCCCGAACCCGGTTTGATGT
ATGCAACACACAGCGTGCCACCGATGTGGATTAGTCCTCATGCAGCGTCA
GATTTCGTATGGGCGGGGGTCTCGAAGCACATGCCATTCACGGGTATACT
TGAATGAAGAGATCGCCCACGAGTCGTTTTGGAGGTGCTCGCGGTTGAGA
ACATGCTCGGGCTAACGCCGTCGTTATTGACCGAGCAGGGCAAGGAGGAA
AAAACATGCGGCCAGGCAGCGGTTTGGTTGGCTCTCCGCCGGTCTAACGG
ACGTGACATATTAGCGTGGACCTTTAGACGGGGTGTCCAAGAACCCCGCG
GCAACGGGCAATGCTCCCGCGCGTGTCGATTTTAACCCGAAAATATTTTG
TCGAATAGAAACCCTGGCAATGGAGACAGAGATTTAGGGGAAGATTCTTC
TTCCGCATTTCCGACCCTGGGTCGGTAAGTTTCTCGGGTAGATGACGTAA
AATGTCTTCAATATTAATTATAGAGGGCTCGGAACAGCCTCCGTTGGGAG
GTGGAAACCTGTTCACCTTATAAAGTATACAGCGAAGGTGTTTATAGCAG
GAGCTCGCGAGGGTAGCAAAAAATAAAAGTAATTTCGTTGAGGATAACGG
TGGGAGGGCAATAGTATTACAGTGTTCATATTTGCTGAGTCTTCTTAGCT
ACCGCGAGTTGCCGTGAAACGCGATCACCTTGCCTCCAAGCGGAGCCTGC
ATTTTTGTTGTACAGGATAGCGGTGGGAGTTTTTTATCCATATTCGATGA
GTCGTCGTAGTGACCGCGAGTTGTAGTGGAACTCAATCGCTTGCCTCCAG
CCGGAGCCCCCGAAGTCGTTGACAACGAGCATGATCCGAAGGCATGCGAC
GGCTCAAGCAGGCATAATCTTTGCCGTAGCGATCGGCAGCAGCGAAAGCC
GGCGGATATGATGTACGCCGCTCGCGTCGGCACTGCCCTCGTCTGGCGAG
TTGTTGCCGTGGTTTGGTTCCAGCAAATTGTGCGAATTTTTACCGGAGTC
CTGAAACAGACACGCGTTCTGATTCTCGGGGGAGAAATATTAGTACTATT
AAGTAGTAGTACGAATACTGATGCTAGAGATGTGAAAGCGGGAGAGGTTA
ACTCTTTTTTTGCTTAAGTGTTGAGTGAATATTCTTGCCTGGTGTGAAGT
GTTGAGGGCAGATCCGACGCAAAAGAGAGAGGTCCCAAAAAGATTTGATA
AAGTGCTCGTCGGACGGCATGGTGGTTGAAAACATGGAGACATAGAACCT
TGAGTATACGAGGTGAGGTGTATGGCATTGTGAAACGTGTTGTAATAACA
GATGACAGTCACGTG

Coding sequence (CDS) from alignment at A-nodosum_M_contig1030:113213..120277-

>mRNA_A-nodosum_M_contig1030.18.1 ID=mRNA_A-nodosum_M_contig1030.18.1|Name=mRNA_A-nodosum_M_contig1030.18.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=804bp|location=Sequence derived from alignment at A-nodosum_M_contig1030:113213..120277- (Ascophyllum nodosum dioecious)
ATGAAACTTCTTCTTCAAGTTCAGCACGTGCACACCGACATCTCACCAGA
GCGTCGCTACAAGGGCCTCGTCGACTGCCTGCAGCGAGTCTATAACGAGA
GCGGGATTTTGTCATTCTGGAGAGGGAACACCGTGAACGTGGTGAGACAC
ATCCCAACGCAGGCCCTCAACTTCTCCCTCAAGGAAAGATTTCGATCGCT
CTACCTCACCGGGGTCCCGATCAACCACTTCTGGACCTTTCTGAGCCTGT
CGCTGCTCTCCGGGGCATCGGCAGGTGCGATATCGCTCGCGGTTTTATAT
CCTCTGGACTTCGCGCGCACCAGGGTAGGGACGGACGTTAGAGCTTCTGG
GAGCCGGCAGTTCAAGGGAAGCATCGATTGCTTGCGGCAGACGTACTCGC
GCGAGGGCATGAGGGGCATGTACCGCGGTTTTGACATCGCTCTTGTGGGA
ACGGTGACCTGGAGGGCGCTCTATTTCGGCCTCTACGATACTCTTACCAC
GCGGTTTCTCGGGGGGAGGCAAGGCGGCACACTCCAGCAGCGCTGGGGGA
TTGCCCAGGTCGTGACCTCGGCCGCCGGAACGTTGGTGTATCCGATCGAC
TCCGTGCGGAGGCGCATGATGATGGAGGCTGGGAGACCTCAACGAATGTA
CACGAGCAGCTTCCACTGCATCCAAAGTGTGCTTGCGACGGAAGGGTTCA
GAGGTTTCTACAGGGGATTGTCGGCGAATCTTCTCAGGGGAGTAGGTACC
TCGGCCCTGCTGGTGATGTACGACGAAATCAGGGTGATGTTTTCTCGGAT
ATGA