mRNA_A-nodosum_M_contig1030.15.1 (mRNA) Ascophyllum nodosum dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig1030.15.1 vs. uniprot
Match: D7FW21_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW21_ECTSI) HSP 1 Score: 477 bits (1228), Expect = 2.040e-145 Identity = 281/454 (61.89%), Postives = 318/454 (70.04%), Query Frame = 2 Query: 1223 EDDLPSALTLLANVEALLGEDDDDNDDASVRLPHYEELDSVPENEEATLLREMSEQNLLHNRDLRQVMVVIGKHLIRDQVTVEYASRIRRLVQGMKSGRLRPDLVCFTGGRVWDNKVADASVGYVFFRHLCEQQGVDLYNTGILVESESTCTKEAMMNVVREVSRLEREEMQQDMDKEXXXXXXXXEAKGVGERVRKKPRQKYHFTLISNEYHLSRVIMVHEISETVSLLSPLKQLDASWGYEHVPYPYACYDDANKKFQADVYKTLEELVPLQVNVQAVARREEFFQEENYASLTHVRARVGDFIRQVHSSSGPLARHMNLVDLQRAAEQGRRGKMGTFPAGSVTTLRLDEALEWAAGALAKIQEIIEPAATRRNSVSLRAWAMCAALLEKAILQGQMAADPDRPLYPHEWGLLEDENP--------QEDAQGDSKATSRRARETLYAVLEEE 2560
ED LP A+ L+ ++ LL D DA RLPH E +EE L +MSE + L N +LRQV+VVIGKHLIRDQVTVEYASRIRRLVQG+KSGRL+PDLVCFTGG V DN+VADAS GYVFFRHLCEQ V N GILVESESTCTKEA+ NVV+EVSR+EREE+ + E +G G R PRQKYHFTLISNEYHLSR+I VH+ISETVSLL+PLK L+ASWGYE VPYPYAC +D K+FQA+VYKTLE+LVPLQVNVQAVA REEFFQEENYASL HVR R+ +FIR+++ P D +A L EAL WAAGALAKIQEIIEPAA RRNSVSLR WAMCAALLE+AILQ QM+ADPDRPL P EWG LEDE P +ED G RRARE + A L E+
Sbjct: 310 EDQLPDAIELIDRLDELLALDPPSESDA--RLPHPE----AEPDEETVRLMQMSEDDQLLNPELRQVLVVIGKHLIRDQVTVEYASRIRRLVQGLKSGRLQPDLVCFTGGTVRDNRVADASAGYVFFRHLCEQHEVGTENIGILVESESTCTKEALDNVVKEVSRMEREELHE------------REREGEG-RSAAWPRQKYHFTLISNEYHLSRIITVHQISETVSLLAPLKLLEASWGYEQVPYPYACSNDDAKEFQANVYKTLEDLVPLQVNVQAVANREEFFQEENYASLVHVRERLKEFIRRMN----PSRERNERADNDKA---------------------LREALVWAAGALAKIQEIIEPAAARRNSVSLRGWAMCAALLERAILQAQMSADPDRPLTPAEWGRLEDEKPPTPPLEVDEEDLIG------RRARENVRAFLRED 713
BLAST of mRNA_A-nodosum_M_contig1030.15.1 vs. uniprot
Match: A0A6H5JCZ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCZ4_9PHAE) HSP 1 Score: 357 bits (917), Expect = 1.280e-104 Identity = 206/331 (62.24%), Postives = 238/331 (71.90%), Query Frame = 2 Query: 1604 RHLCEQQGVDLYNTGILVESESTCTKEAMMNVVREVSRLEREEMQQDMDKEXXXXXXXXEAKGVGERVRKKPRQKYHFTLISNEYHLSRVIMVHEISETVSLLSPLKQLDASWGYEHVPYPYACYDDANKKFQADVYKTLEELVPLQVNVQAVARREEFFQEENYASLTHVRARVGDFIRQVHSSSGPLARHMNLVDLQRAAEQGRRGKMGTFPAGSVTTLRLDE----------ALEWAAGALAKIQEIIEPAATRRNSVSLRAWAMCAALLEKAILQGQMAADPDRPLYPHEWGLLEDENPQED-AQGDSK-ATSRRARETLYAVLEEE 2560
R +C VD N GILVESESTCTKEA+ NVV+EVSR+EREE+ + E +G G R PRQKYHFTLISNEYHLSR+I VH+ISETVSLL+PLK L+ASWGYE VPYPYAC +D K+FQADVYKTLE+LVPLQVNVQAVA REEFFQEENY SL HVR R+ +FIR+++SS P A+ NL D+++ A++GRRG S T +E AL WAAGALAKIQEIIEPAATRRNSVSLR WAMCAALLE+AILQ QM+ADPDRPL P EWG LEDE P + D K RRAR+ + A L E+
Sbjct: 10 RSVCHVVQVDTENIGILVESESTCTKEALDNVVKEVSRMEREELHE------------REREGEG-RSAAWPRQKYHFTLISNEYHLSRIITVHQISETVSLLAPLKLLEASWGYEQVPYPYACSNDDAKEFQADVYKTLEDLVPLQVNVQAVANREEFFQEENYTSLVHVRERLKEFIRKMNSSRRPRAKAANLADVRKGADRGRRGXXXXXXXKSDTLRERNECANNEKTLRKALVWAAGALAKIQEIIEPAATRRNSVSLRGWAMCAALLERAILQVQMSADPDRPLTPAEWGRLEDEKPPTPPVEVDEKDLIGRRARDNVRAFLRED 327
BLAST of mRNA_A-nodosum_M_contig1030.15.1 vs. uniprot
Match: A0A7S1TFF2_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TFF2_9RHOD) HSP 1 Score: 162 bits (410), Expect = 2.650e-39 Identity = 115/361 (31.86%), Postives = 173/361 (47.92%), Query Frame = 2 Query: 1400 HNRDLRQVMVVIGKHLIRDQVTVEYASRIRRLVQGMKSGRLRPDLVCFTGGRVWDN-KVADASVGYVFFRHLCEQQGVDLYNTGILVESESTCTKEAMMNVVREVSRLEREEMQQDMDKEXXXXXXXXEAKGVGERVRKKPRQKYHFTLISNEYHLSRVIMVHEISETVSLLSPLKQLDASWGYEHVPYPYACYDDANKKFQADVYKTLEELVPLQVNVQAVARREEFFQEENYASLTHVRARVGDFIRQVHSSSGPLARHMNLVDLQRAAEQGRRGKMGTFPAGSVTTLRL-DEALEWAAGALAKIQEIIEPAATRRNSVSLRAWAMCAALLEKAILQGQMAADPDRPLYPHEWGLLEDE 2476
H V VV+GK LIRDQVT E+A RI LV+ +K G+L+PD+VCFTGGR +N + A+ GY+FFR LCEQ VDL ++E S ++ ++ NV+ + L + + + HFT +S++YHL R+ VH ++ +SLL PL+ + A+W Y YP+ DD F V L EL + V++ V FF EN L H +A++ + R +HS G ++ + EQ G T +R+ E +E A +L ++ +I P A S +LLE+ +L+ + DPD P+ EW L +E
Sbjct: 40 HLSSTTHVAVVLGKRLIRDQVTKEFARRITTLVKQIKVGQLKPDVVCFTGGRSEENASTSQAAAGYMFFRSLCEQAEVDLDGIQFMLEEISLNSRASLANVLHSLKSL----------------------------LGTQSVNRCHFTFVSSDYHLFRLQEVHRLNPRLSLLHPLEVVAATWHYLFTFYPFCVSDDPKTAFLGRVVVLLNELAIVMVDINGVIDGVSFFNRENLTRLRHTQAKLAEMYRLIHSPGG----------IKTSGEQK----------GFRTDMRIYSEKIEVAISSLREVNSLIAPLAESGPQPSREDIEKARSLLERVLLRLRRHLDPDSPVVWTEWQPLIEE 352
BLAST of mRNA_A-nodosum_M_contig1030.15.1 vs. uniprot
Match: A0A7S1TXW1_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TXW1_9STRA) HSP 1 Score: 155 bits (391), Expect = 1.040e-35 Identity = 120/368 (32.61%), Postives = 187/368 (50.82%), Query Frame = 2 Query: 1400 HNRDLRQVMVVIGKHLIRDQVTVEYASRIRRLVQ---GMKSGRLR-PDLVCFTGGRVWDNKVADASVGYVFFRHLCEQQGVDLYNTGILVESESTCTKEAMMNVVREVSRLEREEMQQDMDKEXXXXXXXXEAKGVGERVRKKPRQKYHFTLISNEYHLSRVIMVHEISETVSLLSPLKQLDASWGYEHVPYPYACYDDANKKFQADVYKTLEELVPLQVNVQAVARREEFFQEENYA-------SLTHVRARVGDFIRQVHSSSGPLARHMNLVDLQRAAEQGRRGKMGTFPAGSVTTLRLDEALEWAAGALAKIQEIIEPAATRRNSVSLRAWAMCAALLEKAILQGQMAADPDRPLYPHEW-GLL 2467
H+ V++ GK L+RDQVT+EYASRIR LV+ +K R R PD+VCFTGG + + ++ AS GY+FFR + E GVD+ + +L+E ES ++EA+ VV EVS R + P Q H+TLIS H+ R+ VHE S S+L +++ S+ P+ D + F A + +EELVP++VN Q A +F + EN + SL + A +GD I+ H+ R+ N E R + G T L ++E LE AA +L++++++++PA ++ + +A A +L + I + ++ DPDRPL +E GL+
Sbjct: 217 HDSSDFHVVLCFGKRLVRDQVTLEYASRIRTLVRYLRRLKESRQRGPDIVCFTGGYMGASCISSASAGYMFFRQMAECAGVDISHGHVLLEEESHVSREALDLVVAEVSE-------------------------AAVRAGQLPGQTVHYTLISTTQHVRRIEYVHEHSHPSSMLRSIEEAGGSFSLLKASNPFLSSPDESLSFLAHLMLVVEELVPIRVNFQGAAAGVDFIRRENLSKLVTAKQSLNELIADLGDPIKLPHAQ-----RYHNPTSKNPLFESAARKLL----LGDGTALNVEEELESAAASLSRVKDMVQPAKNFQSHMV--DFAAAADVLGEVIDRLRLVFDPDRPLQLNEMMGLM 548
BLAST of mRNA_A-nodosum_M_contig1030.15.1 vs. uniprot
Match: A0A6H5JFC6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFC6_9PHAE) HSP 1 Score: 149 bits (376), Expect = 2.240e-34 Identity = 84/143 (58.74%), Postives = 102/143 (71.33%), Query Frame = 2 Query: 1223 EDDLPSALTLLANVEALLGEDDDDNDDASVRLPHYEELDSVPENEEATLL----------REMSEQNLLHNRDLRQVMVVIGKHLIRDQVTVEYASRIRRLVQGMKSGRLRPDLVCFTGGRVWDNKVADASVGYVFFRHLCEQ 1621
ED LP A+ ++ ++ LL D +A RLP+ E + P+ E L+ R+MSE + L N +LRQV+VVIGKHLIRDQVTVEYASRIRRLVQG+KSGRL+PDLVCFTGG V DN+VADAS GY+FFRHLCEQ
Sbjct: 312 EDQLPDAIEVIDRLDELLALDPPSESNA--RLPYPE---AEPDEETVRLMQARGMMMGLERQMSEDDQLLNPELRQVLVVIGKHLIRDQVTVEYASRIRRLVQGLKSGRLQPDLVCFTGGTVRDNRVADASAGYIFFRHLCEQ 449
BLAST of mRNA_A-nodosum_M_contig1030.15.1 vs. uniprot
Match: A0A7R9U259_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U259_9STRA) HSP 1 Score: 149 bits (377), Expect = 2.620e-34 Identity = 109/363 (30.03%), Postives = 182/363 (50.14%), Query Frame = 2 Query: 1421 VMVVIGKHLIRDQVTVEYASRIRRLVQGMK----SGRLRPDLVCFTGGRVWDNKVADASVGYVFFRHLCEQQGVDLYNTGILVESESTCTKEAMMNVVREVSRLEREEMQQDMDKEXXXXXXXXEAKGVGERVRKKPRQKYHFTLISNEYHLSRVIMVHEISETVSLLSPLKQLDASWGYEHVPYPYACYDDANKKFQADVYKTLEELVPLQVNVQAVARREEFFQEENYASLTHVRARVGDFIRQVHSSSGPLARHMNLVDLQRAAEQGRRGKMGTFPA-----GSVTTLRLDEALEWAAGALAKIQEIIEPAATRRNSVSLRAWAMCAA-LLEKAILQGQMAADPDRPLYPHEW-GLLEDE 2476
V+V GK L+RDQVT+EYASRIR +V+ +K +G PD++CFTGG + D+ ++ A+ GY+FFR + E GVD+ ++ +L+E ES +++A+ +V E++ EA G + P + H+TLIS +HL R+ VH S S+L ++ ++ + YPY D +F A++ +EELVP+ VN++A E+F +N LT + + ++ ++ + +R E+ R + A L L E LE A ++ K++ +IE A + +R+ A LL + + + DPDRPL +E GLL+++
Sbjct: 162 VLVCFGKRLVRDQVTLEYASRIRTMVKYLKRLHNTGHKLPDVICFTGGYMGDSAISSATAGYIFFRQMAEYAGVDITSSQLLLEEESEFSRDAIDLIVPEIA----------------------EAAAEGGVL---PGETLHYTLISTTHHLRRLAHVHVNSARSSMLKKIEDAGGTYTFLKSSYPYLASPDEGLRFLANIILVVEELVPVLVNLEAATTGSEWFNRDNLRILTEACHSLRELVQSLNDPT-------KQPHPERFRERSPRNPFYSSAARKKLLSGAYALLLGEELEDAVSSITKVKNLIESAVYGKEYSGMRSDLDTATRLLGQTVAAMRGVLDPDRPLQMNEMVGLLQEQ 492
BLAST of mRNA_A-nodosum_M_contig1030.15.1 vs. uniprot
Match: B7GC13_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GC13_PHATC) HSP 1 Score: 147 bits (371), Expect = 2.800e-33 Identity = 114/362 (31.49%), Postives = 173/362 (47.79%), Query Frame = 2 Query: 1415 RQVMVVIGKHLIRDQVTVEYASRIRRLVQGMKSGRLRPDLVCFTGGRVWDNKVADASVGYVFFRHLCEQQGVDLYNTGILVESESTCTKEAMMNVVREVSRLEREEMQQD---MDKEXXXXXXXXEAKGVGERVRKKPRQKYHFTLISNEYHLSRVIMVHEISETVSLLSPLK-----QLDASWGYEHVPYPYACYDDANKKFQADVYKTLEELVPLQVNVQAVARREEFFQEENYASLTHVR-ARVGDFIRQVHSSSGPLARHMNLVDLQRAAEQGRRGKMGTFPAGSVTTLRLDEALEWAAGALAKIQEIIEPAATRRNSVSLRAWAMCAALLEKAILQGQMAADPDRPLYPHEWGLLED 2473
RQV +V+ K L +DQVTVEYA+RIRRL++ M PD +CF GG NK+ADA GY++FR+LC Q + L ++E + + A NVV +E+QQ + ++ + + ++R+ R + HF+++S+EYHL ++ +H S S L L +D +W Y++ + + F A YKT + LVP N++ V EFFQ +NY L R + V D + H R +L D+ + GK +D LE A L + +++ PA VS W++ LE+A+ Q A DPD PL +WG L D
Sbjct: 194 RQVAIVLSKSLQKDQVTVEYANRIRRLLKAMLEEDYHPDAICFVGGTSTGNKIADADAGYIYFRYLCACQNISLDGIQFILEY-TRAEQGAFQNVV--------DELQQKCLPLWRKAAFNEEDEDYQSFSTKIRR--RLRVHFSIVSSEYHLCQLNDIHVRSPGQSPLRALGGWMRVSVDTTWAYQYSTTMLPRQKNPARSFCAKHYKTAQRLVPALHNLRGVVDNREFFQRDNYRVLVSARRSLVTDMEKLYH-------RQPSLKDVHKLCSDD--GKP------------MDVILESALLNLGRCLDLVRPAGLLTGIVSSTDWSLALTFLEQAVQQICKACDPDEPLDYSDWGSLGD 523
BLAST of mRNA_A-nodosum_M_contig1030.15.1 vs. uniprot
Match: B8C0Y5_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C0Y5_THAPS) HSP 1 Score: 148 bits (374), Expect = 6.840e-33 Identity = 125/411 (30.41%), Postives = 185/411 (45.01%), Query Frame = 2 Query: 1403 NRDLRQVMVVIGKHLIRDQVTVEYASRIRRLVQGMKSG-RLRPDLVCFTGGRVWDNKVADASVGYVFFRHLCEQQGV--DLYNTGILVESESTCTKEAMMNVVREVSRLEREEMQQDMDKEXXXXXXXXEAKGVGERVRKKPRQKYHFTLISNEYHLSRVIMVHEISETVSLLSPLKQL--------------------------------------------------DASWGYEHVPYPYACYDDANKKFQADVYKTLEELVPLQVNVQAVARREEFFQEENYASLTHVRARVGDFIRQVHSSSGPLARHMNLVDLQRAAEQGRRGKMGTFPAGSVTTLRLDEALEWAAGALAKIQEIIEPAATRRNSVSLRAWAMCAALLEKAILQGQMAADPDRPLYPHEWGLLEDE 2476
N V +V GK LIRDQVTVEYA+R+R L + +K RP L+CFTGG N V+DA+ GY++FRHLC QG+ D T + ++++S +EAM + E L R ++ + E + GVG + ++ + HFTL+S EYHL + VH S S L PL L D SW +++ YP+ D + F Y EEL PL VN++ V + EFFQ +NY L+ +R + + +++ G R + + QGR F V ++ ALE A L + ++++PA +SV W+ LEK++ + DPD+PL EWG L D+
Sbjct: 302 NSTTYHVAIVFGKPLIRDQVTVEYATRLRTLAKLLKEEPNFRPKLICFTGGVSEGNVVSDATAGYLYFRHLCVCQGIVIDELQTRMWIDTKSKNEREAMERIASE---LWRNHIKLWLG-ERPLTERLNQHYGVGWTILER-KVDIHFTLVSTEYHLCNLNDVHHRSPVKSFLQPLVSLRGLVGSDRWVNSHELEAMDPSYSSSVHVRGSNTSPVVPERSTFGGIENSVDTSWSFQYGTYPFLHGKDESIVFLGQCYLLGEELTPLLVNMKGVVEQTEFFQRDNYLLLSSIRRSLVSLVEALYTEKGQSIRAGVIKYFE---SQGRN----RFTKEDV---KIIVALESALLNLGRCIDLVKPAGLLVSSVPAPTWSRALDALEKSMHHIHLVCDPDQPLDSLEWGKLFDD 697
BLAST of mRNA_A-nodosum_M_contig1030.15.1 vs. uniprot
Match: K0TG42_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TG42_THAOC) HSP 1 Score: 145 bits (367), Expect = 5.030e-32 Identity = 119/417 (28.54%), Postives = 183/417 (43.88%), Query Frame = 2 Query: 1400 HNRDLRQVMVVIGKHLIRDQVTVEYASRIRRLVQGMKSGRLRPDLVCFTGGRVWDNKVADASVGYVFFRHLCEQQGVDLYN--TGILVESESTCTKEAMMNVVREVSRLEREEMQQDMDKEXXXXXXXXEAKGVGERVRKKPRQKYHFTLISNEYHLSRVIMVHEISETVSLLSPLKQL----------------------------------------------------DASWGYEHVPYPYACYDDANKKFQADVYKTLEELVPLQVNVQAVARREEFFQEENYASLTHVRARVGDFIRQVHSSSGPLARHMNLVDLQRAAEQGR-RGKMGTFPAGSVTTLRLDEALEWAAGALAKIQEIIEPAATRRNSVSLRAWAMCAALLEKAILQGQMAADPDRPLYPHEWGLLEDENPQ 2485
HN + +V GK LI DQV+VEYA R+R L + + +P L+CFTGG N V+DAS G+V+F HLC QG+ L + T ++++S + AM + E+ R + KE + G ++ ++ R HFTL+S +YHL + +H S S L PL L D SW +++ YP+ +D F Y EEL PL VN++ V + EFFQ +NY L+ +R + + +++ G R + R EQG R ++ T +++ LE A L + ++++PA ++V W+ LEK++ Q + DPDRPL EWG L D+ Q
Sbjct: 297 HNSTTYHIAIVFGKALICDQVSVEYAGRLRTLAKMLHDDDFQPSLICFTGGISEGNSVSDASAGFVYFNHLCSAQGIRLNDMKTRFWIDTKSFNERVAMERLASELWR----NYIKGWLKERPLTERHNQRTFGGWKILER-RADIHFTLVSTDYHLCSLNDIHHRSPIKSFLQPLVSLRGLVGSDRFVTDQQELESLDPSYISSVHVSGTAEDAPSPTDRKSFGGIENCVDTSWSFQYSTYPFLHIEDDAVVFLGQCYLLGEELNPLLVNMKGVVEQTEFFQRDNYLLLSSIRRSLVALVEALYTDKGQEIR----AGVIRYFEQGHGRNRLVTRE-----DVKIIVVLEAALLNLGRCIDLVKPAGLLTSTVPAATWSRALDALEKSMDQIKAVCDPDRPLGALEWGKLTDDEDQ 699
BLAST of mRNA_A-nodosum_M_contig1030.15.1 vs. uniprot
Match: A0A7S3V5C3_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V5C3_9STRA) HSP 1 Score: 145 bits (366), Expect = 6.320e-32 Identity = 118/411 (28.71%), Postives = 176/411 (42.82%), Query Frame = 2 Query: 1421 VMVVIGKHLIRDQVTVEYASRIRRLVQGMKSG-RLRPDLVCFTGGRVWDNKVADASVGYVFFRHLCEQQGVDLYNTGILVESESTCTKEAMMNVVREVSRLEREEMQQDMDKEXXXXXXXXEAKGVGERVRKKPRQKYHFTLISNEYHLSRVIMVHEISETVSLLSPLKQL--------------------------------------DA-----------------------SWGYEHVPYPYACYDDANKKFQADVYKTLEELVPLQVNVQAVARREEFFQEENYASLTHVRARVGDFIRQVHSSSGPLARHMNLVDLQRAAEQGRRGKMGTFPAGSVTTLRLDEALEWAAGALAKIQEIIEPAATRRNSVSLRAWAMCAALLEKAILQGQMAADPDRPLYPHEWGLL 2467
V +V GK L+RDQVTVEYASRIR L + K+ P LVCF GG + VA++ GY+FFRH+CE QG+DL I ++++S EA+ +V E+ K + + ++K HFTLIS EYHL + VH S SLL+ ++ + DA SW +++ YPY + F + EEL+PL VN++ V + EFFQ +NY L +R + + I +H S + M +L+R + + +R+ LE A +L + ++++PA SV+ W LE ++ + + DPDRPL P EWG L
Sbjct: 310 VAIVFGKELVRDQVTVEYASRIRTLARLFKNEPEFHPSLVCFCGGIADGSHVANSDAGYIFFRHMCEAQGIDLNGVEICIDNKSRSDDEAINSVTEEI-------------KSTYIPKWLSRSPTTTDTMQKSIDM--HFTLISTEYHLCNINDVHHRSPERSLLNAMENIGDSFTGNRNYSVQQKANAGRSSNDFFIYYDDDENGSFGDANISSGEQGVLKSNHPAVRGLVKTSWSFQYATYPYIYAKSDSTVFLGKCFLLGEELMPLLVNMKGVVEQREFFQRDNYLMLASIRRSLVEHIEALHKPSHSTKKAMK-NELRRIKDVHGNER---------DVIRI---LEGALLSLGRCCDMVKPAGLHVGSVTKDDWKRALRSLEHSMSEIRTYCDPDRPLLPSEWGKL 692 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1030.15.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1030.15.1 >prot_A-nodosum_M_contig1030.15.1 ID=prot_A-nodosum_M_contig1030.15.1|Name=mRNA_A-nodosum_M_contig1030.15.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=1055bp MKLLRRGGPEVWNSNMSATTRCRKSSLLAILLSSTLRECYAETTTAGQASback to top mRNA from alignment at A-nodosum_M_contig1030:87466..98884- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig1030.15.1 ID=mRNA_A-nodosum_M_contig1030.15.1|Name=mRNA_A-nodosum_M_contig1030.15.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=11419bp|location=Sequence derived from alignment at A-nodosum_M_contig1030:87466..98884- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig1030:87466..98884- >mRNA_A-nodosum_M_contig1030.15.1 ID=mRNA_A-nodosum_M_contig1030.15.1|Name=mRNA_A-nodosum_M_contig1030.15.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=3165bp|location=Sequence derived from alignment at A-nodosum_M_contig1030:87466..98884- (Ascophyllum nodosum dioecious)back to top |