mRNA_A-nodosum_M_contig10278.8.1 (mRNA) Ascophyllum nodosum dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_A-nodosum_M_contig10278.8.1 vs. uniprot
Match: A0A6H5L3Y4_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3Y4_9PHAE) HSP 1 Score: 186 bits (473), Expect = 1.210e-52 Identity = 89/114 (78.07%), Postives = 101/114 (88.60%), Query Frame = 1 Query: 1 IDRVFLLARSFNFRVPPYFISNVRALGELEGLAMTADPGFNMISVVYPYVCRRLLSDPSPPLRATLTEFVTTGNGSVRWEVLETLMRDSNVLDERLPSGGETRTQPLDLSLQFL 342 IDRVFLLARSFNFRVPPYFISNVRALGELEGLAMTADPGFN+ISVVYPYVCRRLL+DPSPPLRA L + + +GSV+W+VLE LM DSN LD+R+ +GGETR PLDLS+ F+ Sbjct: 667 IDRVFLLARSFNFRVPPYFISNVRALGELEGLAMTADPGFNLISVVYPYVCRRLLTDPSPPLRAALKDLIVADDGSVQWDVLEVLMSDSNFLDQRVGAGGETRRPPLDLSVDFI 780
BLAST of mRNA_A-nodosum_M_contig10278.8.1 vs. uniprot
Match: D7FNM7_ECTSI (ABC1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNM7_ECTSI) HSP 1 Score: 172 bits (435), Expect = 3.340e-51 Identity = 82/102 (80.39%), Postives = 92/102 (90.20%), Query Frame = 1 Query: 1 IDRVFLLARSFNFRVPPYFISNVRALGELEGLAMTADPGFNMISVVYPYVCRRLLSDPSPPLRATLTEFVTTGNGSVRWEVLETLMRDSNVLDERLPSGGET 306 IDRVFLLARSFNFRVPPYFISNVRALGELEGLAMTADPGFN+ISVVYPYVCRRLL+DPSPPLRA L + + +GSV+W+VLE LM DSN LD+R+ +GGET Sbjct: 121 IDRVFLLARSFNFRVPPYFISNVRALGELEGLAMTADPGFNLISVVYPYVCRRLLTDPSPPLRAALKDLIVADDGSVQWDVLEVLMSDSNFLDQRVGAGGET 222
BLAST of mRNA_A-nodosum_M_contig10278.8.1 vs. uniprot
Match: A0A835YQ71_9STRA (ABC1 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ71_9STRA) HSP 1 Score: 123 bits (308), Expect = 1.220e-30 Identity = 57/88 (64.77%), Postives = 70/88 (79.55%), Query Frame = 1 Query: 1 IDRVFLLARSFNFRVPPYFISNVRALGELEGLAMTADPGFNMISVVYPYVCRRLLSDPSPPLRATLTEFVTTGNGSVRWEVLETLMRD 264 +DR+F LA+ FNF VPPYF+SN+RALGELEGLAMTAD FN++ VYPYV RRLL+DPSP LR L EFV +G RW+V++TL+ D Sbjct: 438 VDRLFSLAQEFNFVVPPYFLSNLRALGELEGLAMTADASFNLVGAVYPYVARRLLTDPSPRLRRALQEFVIDDSGLPRWDVIDTLLHD 525
BLAST of mRNA_A-nodosum_M_contig10278.8.1 vs. uniprot
Match: A0A6T6CQ29_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A6T6CQ29_9RHOD) HSP 1 Score: 89.0 bits (219), Expect = 2.720e-18 Identity = 46/108 (42.59%), Postives = 65/108 (60.19%), Query Frame = 1 Query: 19 LARSFNFRVPPYFISNVRALGELEGLAMTADPGFNMISVVYPYVCRRLLSDPSPPLRATLTEFVTTGNGSVRWEVLETLMRDSNVLDERLPSGGETRTQPLDLSLQFL 342 LA F +PPYF++N+RAL +EGLA+ ADP F+M VVY YV R L D SP L + + + + +G++RW LETL+RD+ + R + P DL + FL Sbjct: 401 LASRFPLVLPPYFLNNIRALATMEGLALMADPSFSMWGVVYQYVVTRALFDRSPALTSAVGRLIVSRDGTIRWNRLETLLRDAAMSINR---SSQINVVPKDLLVDFL 505
BLAST of mRNA_A-nodosum_M_contig10278.8.1 vs. uniprot
Match: A0A7S2ZE39_9RHOD (Hypothetical protein n=8 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZE39_9RHOD) HSP 1 Score: 87.4 bits (215), Expect = 9.650e-18 Identity = 40/89 (44.94%), Postives = 58/89 (65.17%), Query Frame = 1 Query: 4 DRVFLLARSFNFRVPPYFISNVRALGELEGLAMTADPGFNMISVVYPYVCRRLLSDPSPPLRATLTEFVTTGNGSVRWEVLETLMRDSN 270 +++ LA F +P YF+SN+RAL LEGLA+TADP F + ++YPYV R+L +P L+A LTE V GS+RW L ++ D++ Sbjct: 561 EKLLSLANQFPLVLPSYFVSNMRALATLEGLALTADPDFRIFRLIYPYVVNRVLYSENPTLKAALTEMVVDREGSIRWNRLTDMVNDAD 649
BLAST of mRNA_A-nodosum_M_contig10278.8.1 vs. uniprot
Match: A0A7J7IQA4_9RHOD (Protein kinase domain-containing protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IQA4_9RHOD) HSP 1 Score: 87.4 bits (215), Expect = 9.720e-18 Identity = 41/79 (51.90%), Postives = 56/79 (70.89%), Query Frame = 1 Query: 31 FNFRVPPYFISNVRALGELEGLAMTADPGFNMISVVYPYVCRRLLSDPSPPLRATLTEFVTTGNGSVRWEVLETLMRDS 267 F F +P YF++N+RAL LEGLA+ ADP F ++ ++YPYV RRLL+DPSP L+ L E V T G RW+ +E L+ D+ Sbjct: 581 FPFVMPLYFLNNLRALAMLEGLALNADPSFRIMDILYPYVVRRLLTDPSPQLQRALQELVLTPFGEPRWDRVEKLLDDA 659
BLAST of mRNA_A-nodosum_M_contig10278.8.1 vs. uniprot
Match: K9VY76_9CYAN (ABC-1 domain-containing protein n=1 Tax=Crinalium epipsammum PCC 9333 TaxID=1173022 RepID=K9VY76_9CYAN) HSP 1 Score: 86.3 bits (212), Expect = 2.390e-17 Identity = 48/113 (42.48%), Postives = 70/113 (61.95%), Query Frame = 1 Query: 4 DRVFLLARSFNFRVPPYFISNVRALGELEGLAMTADPGFNMISVVYPYVCRRLLSDPSPPLRATLTEFVTTGNGSVRWEVLETLMRDSNVLDERLPSGGETRTQPLDLSLQFL 342 D++ L + FRVP Y+ +R+L LEG+A+ DP F ++S YPYV RRLL+DPSP LRA+L + + NGS RW LE L+++++ D G Q L+ +L+FL Sbjct: 439 DQLSALMYEYPFRVPAYYALIIRSLVTLEGIAINIDPNFKVLSKAYPYVARRLLTDPSPDLRASLQDLLFK-NGSFRWNRLENLLKNASNSD------GFDINQVLNQTLEFL 544
BLAST of mRNA_A-nodosum_M_contig10278.8.1 vs. uniprot
Match: UPI001685FCA3 (AarF/ABC1/UbiB kinase family protein n=5 Tax=Coleofasciculus TaxID=669368 RepID=UPI001685FCA3) HSP 1 Score: 83.2 bits (204), Expect = 2.880e-16 Identity = 46/113 (40.71%), Postives = 68/113 (60.18%), Query Frame = 1 Query: 4 DRVFLLARSFNFRVPPYFISNVRALGELEGLAMTADPGFNMISVVYPYVCRRLLSDPSPPLRATLTEFVTTGNGSVRWEVLETLMRDSNVLDERLPSGGETRTQPLDLSLQFL 342 D + L + FRVP Y+ +R+L LEG+A+ DP F ++S YPYV +RLL+DPSP LRA+L + + +GS RW LE L++++ D+ TQ L+ +L FL Sbjct: 448 DDMSALMYEYPFRVPAYYALIIRSLVTLEGIAINVDPNFKVLSKAYPYVAKRLLTDPSPELRASLRDLLFK-DGSFRWNRLENLLKNARFSDDY------DLTQVLNQTLDFL 553
BLAST of mRNA_A-nodosum_M_contig10278.8.1 vs. uniprot
Match: A0A2V3IYP6_9FLOR (Protein kinase domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYP6_9FLOR) HSP 1 Score: 83.2 bits (204), Expect = 2.950e-16 Identity = 39/88 (44.32%), Postives = 56/88 (63.64%), Query Frame = 1 Query: 1 IDRVFLLARSFNFRVPPYFISNVRALGELEGLAMTADPGFNMISVVYPYVCRRLLSDPSPPLRATLTEFVTTGNGSVRWEVLETLMRD 264 + ++ L F F YF++N+R LG LEGLA++A+P F+++ VVYPYV RR+LSDPSP R L V G +RW + L++D Sbjct: 597 VGKLLTLGNRFPFVFNDYFLNNLRCLGMLEGLALSANPNFSILGVVYPYVVRRILSDPSPRFRRALGSLVIDSYGRMRWSRMGQLLQD 684
BLAST of mRNA_A-nodosum_M_contig10278.8.1 vs. uniprot
Match: A0A3S0ZKI8_CHLFR (Protein kinase domain-containing protein n=2 Tax=Chlorogloeopsis fritschii TaxID=1124 RepID=A0A3S0ZKI8_CHLFR) HSP 1 Score: 82.8 bits (203), Expect = 3.920e-16 Identity = 41/88 (46.59%), Postives = 58/88 (65.91%), Query Frame = 1 Query: 4 DRVFLLARSFNFRVPPYFISNVRALGELEGLAMTADPGFNMISVVYPYVCRRLLSDPSPPLRATLTEFVTTGNGSVRWEVLETLMRDS 267 D + L + FRVPPY+ +R+L LEG+A+ DP F ++S YPYV +RLL+DPSP LRA+L + + GS RW LE L+R++ Sbjct: 430 DELSALMYEYPFRVPPYYALIIRSLVTLEGIAIYIDPNFKVLSEAYPYVAKRLLTDPSPELRASLRDLLFK-EGSFRWNRLENLLRNA 516 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig10278.8.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig10278.8.1 >prot_A-nodosum_M_contig10278.8.1 ID=prot_A-nodosum_M_contig10278.8.1|Name=mRNA_A-nodosum_M_contig10278.8.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=114bp IDRVFLLARSFNFRVPPYFISNVRALGELEGLAMTADPGFNMISVVYPYVback to top mRNA from alignment at A-nodosum_M_contig10278:12508..14079+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig10278.8.1 ID=mRNA_A-nodosum_M_contig10278.8.1|Name=mRNA_A-nodosum_M_contig10278.8.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=1572bp|location=Sequence derived from alignment at A-nodosum_M_contig10278:12508..14079+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig10278:12508..14079+ >mRNA_A-nodosum_M_contig10278.8.1 ID=mRNA_A-nodosum_M_contig10278.8.1|Name=mRNA_A-nodosum_M_contig10278.8.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=342bp|location=Sequence derived from alignment at A-nodosum_M_contig10278:12508..14079+ (Ascophyllum nodosum dioecious)back to top |