mRNA_A-nodosum_M_contig10278.4.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig10278.4.1 vs. uniprot
Match: D7FNM6_ECTSI (ABC transporter-like n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNM6_ECTSI) HSP 1 Score: 126 bits (317), Expect = 2.210e-33 Identity = 63/78 (80.77%), Postives = 68/78 (87.18%), Query Frame = 1
Query: 1 VYKAWIDEQPVAVKVQRPDLLEVVGLDFFLARRIAAGVVRLSRGRSFFGGRLAVRSDLVAAVDEYASRLFEELDYRKE 234
VYKA ID +PVAVKVQRPDLLE VGLDF++ARR+A + RLSR SFFGGRL VRSDLVAAVDEY SRLFEELDYRKE
Sbjct: 181 VYKAQIDGRPVAVKVQRPDLLEAVGLDFYVARRVAEAITRLSRSSSFFGGRLVVRSDLVAAVDEYGSRLFEELDYRKE 258
BLAST of mRNA_A-nodosum_M_contig10278.4.1 vs. uniprot
Match: A0A6H5L3N2_9PHAE (ABC1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3N2_9PHAE) HSP 1 Score: 124 bits (311), Expect = 1.030e-31 Identity = 62/78 (79.49%), Postives = 68/78 (87.18%), Query Frame = 1
Query: 1 VYKAWIDEQPVAVKVQRPDLLEVVGLDFFLARRIAAGVVRLSRGRSFFGGRLAVRSDLVAAVDEYASRLFEELDYRKE 234
VYKA I+ +PVAVKVQRPDLLE VGLDF++ARR+A + RLSR SFFGGRL VRSDLVAAVDEY SRLFEELDYRKE
Sbjct: 170 VYKAQINGRPVAVKVQRPDLLEAVGLDFYVARRVADAITRLSRSSSFFGGRLVVRSDLVAAVDEYGSRLFEELDYRKE 247
BLAST of mRNA_A-nodosum_M_contig10278.4.1 vs. uniprot
Match: A9BL31_HEMAN (Kin(ABC1) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A9BL31_HEMAN) HSP 1 Score: 75.1 bits (183), Expect = 5.440e-14 Identity = 42/78 (53.85%), Postives = 52/78 (66.67%), Query Frame = 1
Query: 1 VYKAWIDEQPVAVKVQRPDLLEVVGLDFFLARRIAAGVVRLSRGRSFFGGRLAVRSDLVAAVDEYASRLFEELDYRKE 234
VYKA +D VAVKVQRP LLE++ LD F+ R +A ++ + VR+DLVA +DEYA RLFEELDYRKE
Sbjct: 388 VYKATLDGIQVAVKVQRPGLLELIALDIFVIRFLADMTQKVFK----------VRTDLVAIIDEYAERLFEELDYRKE 455
BLAST of mRNA_A-nodosum_M_contig10278.4.1 vs. uniprot
Match: J7G6I5_9CRYP (ABC1 family protein n=1 Tax=Chroomonas mesostigmatica CCMP1168 TaxID=1195612 RepID=J7G6I5_9CRYP) HSP 1 Score: 68.9 bits (167), Expect = 8.000e-12 Identity = 40/78 (51.28%), Postives = 50/78 (64.10%), Query Frame = 1
Query: 1 VYKAWIDEQPVAVKVQRPDLLEVVGLDFFLARRIAAGVVRLSRGRSFFGGRLAVRSDLVAAVDEYASRLFEELDYRKE 234
VYKA +D VA+KVQRP L E++ LD + R ++ +SF +R+DLVA VDEYA RLFEELDYRKE
Sbjct: 394 VYKANLDGMQVAIKVQRPGLSEMIALDILIIRFLS-----FILQKSF-----KIRTDLVAIVDEYAQRLFEELDYRKE 461
BLAST of mRNA_A-nodosum_M_contig10278.4.1 vs. uniprot
Match: A0A7J7IQA4_9RHOD (Protein kinase domain-containing protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IQA4_9RHOD) HSP 1 Score: 67.8 bits (164), Expect = 2.050e-11 Identity = 38/78 (48.72%), Postives = 48/78 (61.54%), Query Frame = 1
Query: 1 VYKAWIDEQPVAVKVQRPDLLEVVGLDFFLARRIAAGVVRLSRGRSFFGGRLAVRSDLVAAVDEYASRLFEELDYRKE 234
VYKA +D +AVKVQRP ++E + LDFF+ R + G + A R+DLV A+DEYASRLFEE DY E
Sbjct: 329 VYKASLDGVDLAVKVQRPGIVERIALDFFVVRML---------GELWMHSPWAPRTDLVEAIDEYASRLFEETDYGHE 397
BLAST of mRNA_A-nodosum_M_contig10278.4.1 vs. uniprot
Match: A0A6H5KUQ1_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KUQ1_9PHAE) HSP 1 Score: 66.2 bits (160), Expect = 7.130e-11 Identity = 40/80 (50.00%), Postives = 52/80 (65.00%), Query Frame = 1
Query: 1 VYKAWI--DEQPVAVKVQRPDLLEVVGLDFFLARRIAAGVVRLSRGRSFFGGRLAVRSDLVAAVDEYASRLFEELDYRKE 234
VYKA + + +PVAVKVQRP +LE V LD LAR + + ++ LA R+DLVA +DE+ASR F+ELDY KE
Sbjct: 332 VYKATLRSNGKPVAVKVQRPGVLETVSLDLHLARELGYQMKKIPF--------LAERTDLVALLDEFASRFFDELDYVKE 403
BLAST of mRNA_A-nodosum_M_contig10278.4.1 vs. uniprot
Match: A0A351L2K9_9CYAN (Protein kinase domain-containing protein n=3 Tax=Cyanobacteria TaxID=1117 RepID=A0A351L2K9_9CYAN) HSP 1 Score: 65.9 bits (159), Expect = 9.610e-11 Identity = 37/79 (46.84%), Postives = 51/79 (64.56%), Query Frame = 1
Query: 1 VYKAWIDE-QPVAVKVQRPDLLEVVGLDFFLARRIAAGVVRLSRGRSFFGGRLAVRSDLVAAVDEYASRLFEELDYRKE 234
VYK + + VAVKVQRPDL + + LD ++ARR+AA +GR ++SDLVA +DE+ SR+FEE+DY E
Sbjct: 182 VYKGKLKTGETVAVKVQRPDLAQKITLDLYIARRLAAWAQNTFKGR--------LKSDLVAILDEFGSRIFEEMDYIHE 252
BLAST of mRNA_A-nodosum_M_contig10278.4.1 vs. uniprot
Match: A0A7S0QVV8_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0QVV8_9CHLO) HSP 1 Score: 65.9 bits (159), Expect = 9.640e-11 Identity = 39/78 (50.00%), Postives = 49/78 (62.82%), Query Frame = 1
Query: 1 VYKAWIDEQPVAVKVQRPDLLEVVGLDFFLARRIAAGVVRLSRGRSFFGGRLAVRSDLVAAVDEYASRLFEELDYRKE 234
VYKA + +PVAVKVQRP L E++ D L R A+ V G G+ VR++ VAAVDE+ SRLFEELD+ E
Sbjct: 317 VYKAVVGGRPVAVKVQRPGLREMIAADARLLRLGASAV----EGIQGADGQRIVRAEAVAAVDEFCSRLFEELDFENE 390
BLAST of mRNA_A-nodosum_M_contig10278.4.1 vs. uniprot
Match: A0A6T6CQ29_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A6T6CQ29_9RHOD) HSP 1 Score: 65.5 bits (158), Expect = 1.320e-10 Identity = 37/78 (47.44%), Postives = 48/78 (61.54%), Query Frame = 1
Query: 1 VYKAWIDEQPVAVKVQRPDLLEVVGLDFFLARRIAAGVVRLSRGRSFFGGRLAVRSDLVAAVDEYASRLFEELDYRKE 234
VYK +D VA+KVQRP ++E + LDF + R+I V RL + R+ +V A+DEYAS LFEELDYR E
Sbjct: 156 VYKGSLDGVQVAIKVQRPGIVEQIALDFHVVRQIMLLVNRL----------IESRTGIVGALDEYASSLFEELDYRNE 223
BLAST of mRNA_A-nodosum_M_contig10278.4.1 vs. uniprot
Match: A0A5J4YTY6_PORPP (Putative aarF domain-containing protein kinase, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YTY6_PORPP) HSP 1 Score: 65.5 bits (158), Expect = 1.340e-10 Identity = 39/78 (50.00%), Postives = 47/78 (60.26%), Query Frame = 1
Query: 1 VYKAWIDEQPVAVKVQRPDLLEVVGLDFFLARRIAAGVVRLSRGRSFFGGRLAVRSDLVAAVDEYASRLFEELDYRKE 234
VYKA +D VAVK+QRP ++EVV LDF + R +A S F V DL VD+YASRLFEELDY +E
Sbjct: 490 VYKAKLDGIDVAVKIQRPGIVEVVALDFHVIRNVAEFAT------SVFPFSTLVPPDLCDIVDDYASRLFEELDYVQE 561 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig10278.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig10278.4.1 >prot_A-nodosum_M_contig10278.4.1 ID=prot_A-nodosum_M_contig10278.4.1|Name=mRNA_A-nodosum_M_contig10278.4.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=80bp VYKAWIDEQPVAVKVQRPDLLEVVGLDFFLARRIAAGVVRLSRGRSFFGGback to top mRNA from alignment at A-nodosum_M_contig10278:8216..8455+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig10278.4.1 ID=mRNA_A-nodosum_M_contig10278.4.1|Name=mRNA_A-nodosum_M_contig10278.4.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=240bp|location=Sequence derived from alignment at A-nodosum_M_contig10278:8216..8455+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig10278:8216..8455+ >mRNA_A-nodosum_M_contig10278.4.1 ID=mRNA_A-nodosum_M_contig10278.4.1|Name=mRNA_A-nodosum_M_contig10278.4.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=240bp|location=Sequence derived from alignment at A-nodosum_M_contig10278:8216..8455+ (Ascophyllum nodosum dioecious)back to top |