mRNA_A-nodosum_M_contig10278.3.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig10278.3.1 vs. uniprot
Match: D7FNM6_ECTSI (ABC transporter-like n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNM6_ECTSI) HSP 1 Score: 138 bits (348), Expect = 3.420e-37 Identity = 80/125 (64.00%), Postives = 91/125 (72.80%), Query Frame = 1
Query: 1 ILLEAGGVLLALAGDKISTLARKDTDMDI-VSSGKVVPRRATAEKIRRAVTRLGPNFVKIGQALASRPDFVGEAIAGELLLLQDAMPPFSNKVAMELIRQELGARPEDCFERIGGEPVAAASLGQ 372
IL+E GVLLAL D + ++ DTD I V +G+ T +IR +VTRLGPNFVKIGQALASRPD VGEAIAGELLLLQDAMP FSN+VA I +ELG PED FE +G PVAAASLGQ
Sbjct: 58 ILVEVCGVLLALGMDYL--VSGNDTDTGIRVPTGEAEAGGNTPTRIRESVTRLGPNFVKIGQALASRPDLVGEAIAGELLLLQDAMPLFSNEVARRFIHEELGGYPEDIFEAMGDTPVAAASLGQ 180
BLAST of mRNA_A-nodosum_M_contig10278.3.1 vs. uniprot
Match: A0A6H5L3N2_9PHAE (ABC1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3N2_9PHAE) HSP 1 Score: 129 bits (323), Expect = 1.160e-32 Identity = 78/124 (62.90%), Postives = 88/124 (70.97%), Query Frame = 1
Query: 1 ILLEAGGVLLALAGDKISTLARKDTDMDIVSSGKVVPRRATAEKIRRAVTRLGPNFVKIGQALASRPDFVGEAIAGELLLLQDAMPPFSNKVAMELIRQELGARPEDCFERIGGEPVAAASLGQ 372
IL+E GVLLAL D + ++ D D +G +P R IR +VTRLGPNFVKIGQALASRPD VGEAIAGELLLLQDAMP FSN+VA I +ELG PED FE +G PVAAASLGQ
Sbjct: 58 ILVEVCGVLLALGMDYL--VSGNDAD-----TGIRMPTR-----IRESVTRLGPNFVKIGQALASRPDLVGEAIAGELLLLQDAMPLFSNEVARRFIYEELGDYPEDIFESMGDTPVAAASLGQ 169
BLAST of mRNA_A-nodosum_M_contig10278.3.1 vs. uniprot
Match: A0A835YQ71_9STRA (ABC1 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ71_9STRA) HSP 1 Score: 104 bits (259), Expect = 1.220e-23 Identity = 52/83 (62.65%), Postives = 62/83 (74.70%), Query Frame = 1
Query: 124 AEKIRRAVTRLGPNFVKIGQALASRPDFVGEAIAGELLLLQDAMPPFSNKVAMELIRQELGARPEDCFERIGGEPVAAASLGQ 372
A ++R A+TRLGP F+K+GQAL+SRPD V E EL LLQDA+P F N VA L+R+ELGA PE F+ I EPVAAASLGQ
Sbjct: 96 ATELREAITRLGPAFIKLGQALSSRPDLVDEQTMAELSLLQDALPFFPNGVARALVREELGAYPERLFDEISAEPVAAASLGQ 178
BLAST of mRNA_A-nodosum_M_contig10278.3.1 vs. uniprot
Match: A0A1E5QZL9_9CHRO (Protein kinase domain-containing protein n=3 Tax=Cyanobacterium TaxID=102234 RepID=A0A1E5QZL9_9CHRO) HSP 1 Score: 100 bits (248), Expect = 4.780e-22 Identity = 45/83 (54.22%), Postives = 63/83 (75.90%), Query Frame = 1
Query: 124 AEKIRRAVTRLGPNFVKIGQALASRPDFVGEAIAGELLLLQDAMPPFSNKVAMELIRQELGARPEDCFERIGGEPVAAASLGQ 372
AEK+R+ +TRLGP ++KIGQAL++RPD V A EL LQD +PPF N++A + I +ELG++PE+ ++ I P+AAASLGQ
Sbjct: 99 AEKLRKILTRLGPAYIKIGQALSTRPDLVSPAYLEELTSLQDQLPPFPNEIAYQFIEEELGSKPEEVYQEITPNPIAAASLGQ 181
BLAST of mRNA_A-nodosum_M_contig10278.3.1 vs. uniprot
Match: UPI0016823148 (AarF/ABC1/UbiB kinase family protein n=2 Tax=unclassified Microcoleus TaxID=2642155 RepID=UPI0016823148) HSP 1 Score: 99.4 bits (246), Expect = 8.940e-22 Identity = 48/94 (51.06%), Postives = 69/94 (73.40%), Query Frame = 1
Query: 94 SGKVVPRR-ATAEKIRRAVTRLGPNFVKIGQALASRPDFVGEAIAGELLLLQDAMPPFSNKVAMELIRQELGARPEDCFERIGGEPVAAASLGQ 372
+G++V + A AE++R+ +T+LGP F+KIGQAL++RPD V EL LQD +PPF+NK+A + I +ELGA P++ + + EPVAAASLGQ
Sbjct: 110 TGRLVKNQPARAEQLRKMLTQLGPAFIKIGQALSTRPDLVPPGYLEELAKLQDQLPPFANKIAYQFIEEELGAHPDEIYAELSLEPVAAASLGQ 203
BLAST of mRNA_A-nodosum_M_contig10278.3.1 vs. uniprot
Match: A0A6P0RWV4_9CYAN (AarF/ABC1/UbiB kinase family protein (Fragment) n=2 Tax=unclassified Symploca TaxID=2620434 RepID=A0A6P0RWV4_9CYAN) HSP 1 Score: 97.8 bits (242), Expect = 2.930e-21 Identity = 45/86 (52.33%), Postives = 62/86 (72.09%), Query Frame = 1
Query: 115 RATAEKIRRAVTRLGPNFVKIGQALASRPDFVGEAIAGELLLLQDAMPPFSNKVAMELIRQELGARPEDCFERIGGEPVAAASLGQ 372
R A ++R +TRLGP ++K+GQAL++RPD V + EL LLQD +PPF N+VA + I +ELGA P+D + + +PVAAASLGQ
Sbjct: 56 RRRAIQLREILTRLGPAYIKVGQALSTRPDLVSQVYLEELALLQDQLPPFPNEVAFQFIEEELGAPPDDIYMELTSQPVAAASLGQ 141
BLAST of mRNA_A-nodosum_M_contig10278.3.1 vs. uniprot
Match: UPI0003474DE7 (AarF/ABC1/UbiB kinase family protein n=1 Tax=Synechococcus sp. PCC 7336 TaxID=195250 RepID=UPI0003474DE7) HSP 1 Score: 97.8 bits (242), Expect = 3.030e-21 Identity = 44/83 (53.01%), Postives = 61/83 (73.49%), Query Frame = 1
Query: 124 AEKIRRAVTRLGPNFVKIGQALASRPDFVGEAIAGELLLLQDAMPPFSNKVAMELIRQELGARPEDCFERIGGEPVAAASLGQ 372
A ++R +T LGP ++KIGQAL++RPD V EL LQD +PPFSN VA +LI ++LGA+P++ F+R+ P+AAASLGQ
Sbjct: 93 AIRLREILTELGPAYIKIGQALSTRPDLVSPVFLEELTKLQDQLPPFSNAVAYQLIEEQLGAKPDEIFQRLSSNPIAAASLGQ 175
BLAST of mRNA_A-nodosum_M_contig10278.3.1 vs. uniprot
Match: A0A3C0NBB6_9CYAN (Protein kinase domain-containing protein n=1 Tax=Cyanobacteria bacterium UBA8543 TaxID=2055766 RepID=A0A3C0NBB6_9CYAN) HSP 1 Score: 97.8 bits (242), Expect = 3.090e-21 Identity = 47/97 (48.45%), Postives = 64/97 (65.98%), Query Frame = 1
Query: 82 DIVSSGKVVPRRATAEKIRRAVTRLGPNFVKIGQALASRPDFVGEAIAGELLLLQDAMPPFSNKVAMELIRQELGARPEDCFERIGGEPVAAASLGQ 372
D V V+ R A ++R+ +T LGP ++K+GQAL++RPD V EL LLQD +PPF N+VA I +ELG RPE+ + + +PVAAASLGQ
Sbjct: 95 DRVRGRSVINERRRAAQLRKLLTNLGPAYIKVGQALSTRPDLVPPIFLDELSLLQDQLPPFPNEVAYRFIEEELGDRPEEIYAELTAQPVAAASLGQ 191
BLAST of mRNA_A-nodosum_M_contig10278.3.1 vs. uniprot
Match: A0A252EB57_9NOSO (Protein kinase domain-containing protein n=20 Tax=Nostocales TaxID=1161 RepID=A0A252EB57_9NOSO) HSP 1 Score: 97.8 bits (242), Expect = 3.090e-21 Identity = 45/86 (52.33%), Postives = 62/86 (72.09%), Query Frame = 1
Query: 115 RATAEKIRRAVTRLGPNFVKIGQALASRPDFVGEAIAGELLLLQDAMPPFSNKVAMELIRQELGARPEDCFERIGGEPVAAASLGQ 372
R A ++R +TRLGP ++KIGQAL++RPD V A EL LQD +PPF N++A + I++ELGA PE+ + + EP+AAASLGQ
Sbjct: 116 RRRAAQLRELLTRLGPAYIKIGQALSTRPDLVPPAFLEELTKLQDQLPPFPNEIAYQFIKEELGAPPEEIYSELSPEPIAAASLGQ 201
BLAST of mRNA_A-nodosum_M_contig10278.3.1 vs. uniprot
Match: A0A6P0V812_9CYAN (AarF/ABC1/UbiB kinase family protein n=4 Tax=Oscillatoriales TaxID=1150 RepID=A0A6P0V812_9CYAN) HSP 1 Score: 97.8 bits (242), Expect = 3.100e-21 Identity = 45/86 (52.33%), Postives = 62/86 (72.09%), Query Frame = 1
Query: 115 RATAEKIRRAVTRLGPNFVKIGQALASRPDFVGEAIAGELLLLQDAMPPFSNKVAMELIRQELGARPEDCFERIGGEPVAAASLGQ 372
R A ++R +TRLGP ++K+GQAL++RPD V + EL LLQD +PPF N+VA + I +ELGA P+D + + +PVAAASLGQ
Sbjct: 107 RRRAIQLREILTRLGPAYIKVGQALSTRPDLVSQVYLEELALLQDQLPPFPNEVAFQFIEEELGAPPDDIYMELTSQPVAAASLGQ 192 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig10278.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig10278.3.1 >prot_A-nodosum_M_contig10278.3.1 ID=prot_A-nodosum_M_contig10278.3.1|Name=mRNA_A-nodosum_M_contig10278.3.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=124bp ILLEAGGVLLALAGDKISTLARKDTDMDIVSSGKVVPRRATAEKIRRAVTback to top mRNA from alignment at A-nodosum_M_contig10278:7078..7828+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig10278.3.1 ID=mRNA_A-nodosum_M_contig10278.3.1|Name=mRNA_A-nodosum_M_contig10278.3.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=751bp|location=Sequence derived from alignment at A-nodosum_M_contig10278:7078..7828+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig10278:7078..7828+ >mRNA_A-nodosum_M_contig10278.3.1 ID=mRNA_A-nodosum_M_contig10278.3.1|Name=mRNA_A-nodosum_M_contig10278.3.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=372bp|location=Sequence derived from alignment at A-nodosum_M_contig10278:7078..7828+ (Ascophyllum nodosum dioecious)back to top |