mRNA_A-nodosum_M_contig1022.26.1 (mRNA) Ascophyllum nodosum dioecious
|
Overview
Homology
BLAST of mRNA_A-nodosum_M_contig1022.26.1 vs. uniprot
Match: D7FZL4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZL4_ECTSI) HSP 1 Score: 375 bits (964), Expect = 3.420e-117 Identity = 203/319 (63.64%), Postives = 242/319 (75.86%), Query Frame = 2
Query: 11 EELEIAAEGRRREKIRQRVDKAVRKGRIPKEYKQAYARLLSSPIMSVLCSNNGWRARLLGDRAFMTKLAIEMITGTVSQVVAEYQKRGKRFSKELEFVLADTLTCLFANYAAIWLSCPTVAVSAA-KKGVAKSGGALQHWLASCPSNAFQKVVTEGGVSKSFSLYQRGAALIIPMPKLFAVGFGATLVGYGLVAGLENIQAARS------------------RGEVTEGKAGEV-------KPAVPVLGSSLAIGTFLAVSTNIRYQVIAGAVEQRMFDAMA--RPGLSKLGSTFVRSANLYVGSLTIVDWLRFVGLQH 883
EE + A+GRRR++I ++V++AVR+G+IPKE YA+LL+SP+MS+LC N+GWRARLLGD FMTKLAIEM+TGT +Q +AEYQKRGK+F +EL+FV ADTLTCLFAN+AA+WLSCPTVAV A KK AK+GG LQ +LA+CPSNAFQKVV EGGVSK+FS+ +RGAAL++PMPKLF +GFGATL GYGL+AGLE A R+ RG KA KP VPVLGS LA+G FLAV TN+RYQ IAGAVEQR+FD M PGLS L ST VRSANLYVGSLTIVD LR+VG+QH
Sbjct: 109 EEYDFVAKGRRRKRIFRKVERAVRRGKIPKECSSDYAKLLTSPLMSLLCKNSGWRARLLGDTTFMTKLAIEMVTGTAAQFLAEYQKRGKKFMQELDFVAADTLTCLFANFAAVWLSCPTVAVKAVCKKEAAKAGGTLQKFLAACPSNAFQKVVAEGGVSKTFSVAERGAALLVPMPKLFVIGFGATLAGYGLIAGLETFSAWRTAAAAAPPVVVERGAAKSKRGLKRAQKARAAALAEEAQKPPVPVLGSGLAVGMFLAVWTNLRYQFIAGAVEQRIFDTMLAKNPGLSSLASTAVRSANLYVGSLTIVDGLRYVGVQH 427
BLAST of mRNA_A-nodosum_M_contig1022.26.1 vs. uniprot
Match: A0A6H5LAU0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAU0_9PHAE) HSP 1 Score: 356 bits (913), Expect = 1.620e-111 Identity = 191/294 (64.97%), Postives = 221/294 (75.17%), Query Frame = 2
Query: 83 KGRIPKEYKQAYARLLSSPIMSVLCSNNGWRARLLGDRAFMTKLAIEMITGTVSQVVAEYQKRGKRFSKELEFVLADTLTCLFANYAAIWLSCPTVAVSAA-KKGVAKSGGALQHWLASCPSNAFQKVVTEGGVSKSFSLYQRGAALIIPMPKLFAVGFGATLVGYGLVAGLENIQA----ARSRGEVTEGKAGEV---------------------KPAVPVLGSSLAIGTFLAVSTNIRYQVIAGAVEQRMFDAMA--RPGLSKLGSTFVRSANLYVGSLTIVDWLRFVGLQ 880
+G+IPKE YA+LL+SP+MS+LC N+GWRARLLGD FMTKLAIEM+TGT +Q +AEYQKRGKRF +EL+FV ADTLTCLFAN+AA+WLSCPTVAV A KK AK+GG LQ +LA+CPSNAFQKVV EGGVSK+FS+ +RGAAL++PMPKLF +GFGATL GYGL+AGLE A A + V GK KP VPVLGS LA+G FLAV TN+RYQ IAGAVEQR+FD M PGLS L ST VRSANLYVGSLTIVDWLR+VG+Q
Sbjct: 9 RGQIPKECSSDYAKLLTSPLMSLLCKNSGWRARLLGDTTFMTKLAIEMVTGTGAQFLAEYQKRGKRFMQELDFVAADTLTCLFANFAAVWLSCPTVAVKAVCKKEAAKAGGTLQKFLAACPSNAFQKVVAEGGVSKTFSVAERGAALLVPMPKLFVIGFGATLAGYGLIAGLETFSAWTTAAAAAPPVVAGKGAAKSKRGLKRAQKARAAALAEEAQKPPVPVLGSGLAVGMFLAVWTNLRYQFIAGAVEQRIFDTMLAKNPGLSSLASTAVRSANLYVGSLTIVDWLRYVGVQ 302
BLAST of mRNA_A-nodosum_M_contig1022.26.1 vs. uniprot
Match: A0A836CF64_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF64_9STRA) HSP 1 Score: 193 bits (490), Expect = 2.460e-52 Identity = 109/223 (48.88%), Postives = 145/223 (65.02%), Query Frame = 2
Query: 245 QVVAEYQKRGKRFSKELEFVLADTLTCLFANYAAIWLSCPTVAVSAAKKGVAKSGG---ALQHWLASCPSNAFQKVVTEGGVSKSFSLYQRGAALIIPMPKLFAVGFGATLVGYGLVAGLENIQAARSRGEVTEGKAGEVKPAVPVLGSSLAIGTFLAVSTNIRYQVIAGAVEQRMFDAM--ARPGLSKLGSTFVRSANLYVGSLTIVDWLRFVGLQH*CSED 898
QV+AEY+KR +F KE +FVLAD LT FAN+AA+W SCPT+ + A A S G +L ++ SCPSNAFQ+VV + +SL QRGAALI PMP+LF +GFGA GYGL + + +I+ A V + P+ SSLAIG FLAVS+N+RYQ+IAG +EQR D ++P +S S +R+ANLY+G+ IVDWLR VG+QH ++
Sbjct: 2 QVLAEYEKRRDKFFKEFDFVLADILTSCFANFAAVWASCPTMRPAIAGSADAASKGMFASLGRFMNSCPSNAFQRVVAP---ATHYSLAQRGAALIKPMPQLFVIGFGACAAGYGLTSLMSHIRLALDPTMVKNTED------APIFKSSLAIGAFLAVSSNLRYQIIAGGIEQRFLDVALASKPAVSNACSFVLRTANLYLGASMIVDWLRIVGVQHSAQDE 215
BLAST of mRNA_A-nodosum_M_contig1022.26.1 vs. uniprot
Match: A0A5J9U7T0_9POAL (Uncharacterized protein (Fragment) n=1 Tax=Eragrostis curvula TaxID=38414 RepID=A0A5J9U7T0_9POAL) HSP 1 Score: 183 bits (464), Expect = 6.860e-47 Identity = 110/288 (38.19%), Postives = 172/288 (59.72%), Query Frame = 2
Query: 23 IAAEGRRREKIRQRVDKAVRKGRIPKEYKQAYARLLSSPIMSVLCSNNGWRARLLGDRAFMTKLAIEMITGTVSQVVAEYQKRGKRFSKELEFVLADTLTCLFANYAAIWLSCPTVAVSAAKKGVAKSGGALQHWLASCPSNAFQKVVTEGGVSKSFSLYQRGAALIIPMPKLFAVGFGATLVGYGLVAGLENIQAARSRGEVTEGKAGEVKPAVPVLGSSLAIGTFLAVSTNIRYQVIAGAVEQRMFDAMARPGLSKLGSTF--VRSANLYVGSLTIVDWLRFVGLQ 880
+A GR+ E + + AV+ GR+P E + +A L +SP+ L G++ RLL D F+TK+A E G ++ AEY+KR +F KEL+FV+ D + + A++ +WL PTV++ K +A + GA+ + +CP NAFQ + S+S QR A++ KLFAVG A+LVG G+ L ++R VTE AGEV+ +P++ +S+A G ++AVS+N+RYQ++AG +EQRM + + LG+ VR+ N ++GSL VD+ R+VG+Q
Sbjct: 117 LAQLGRKLESLPADLAAAVQAGRVPGEIVRRFADLEASPVFRWLLQFGGFKERLLADDLFLTKVAFECGIGIFTKTAAEYEKRKDKFMKELDFVICDVVMAIIADFMLVWLPAPTVSL---KPSIAGNAGAIAKFFYNCPDNAFQVALA----GSSYSFLQRIGAIVRNGAKLFAVGTSASLVGTGVTNAL-----IKARKAVTEDSAGEVEN-IPIVETSVAYGVYMAVSSNLRYQILAGVIEQRMLEPLLHRHKVALGALCFAVRTGNTFLGSLLWVDYARWVGVQ 391
BLAST of mRNA_A-nodosum_M_contig1022.26.1 vs. uniprot
Match: A0A6P5H2P0_ANACO (protein RETICULATA-RELATED 4, chloroplastic-like n=2 Tax=Ananas comosus TaxID=4615 RepID=A0A6P5H2P0_ANACO) HSP 1 Score: 179 bits (455), Expect = 6.200e-46 Identity = 110/290 (37.93%), Postives = 169/290 (58.28%), Query Frame = 2
Query: 17 LEIAAEGRRREKIRQRVDKAVRKGRIPKEYKQAYARLLSSPIMSVLCSNNGWRARLLGDRAFMTKLAIEMITGTVSQVVAEYQKRGKRFSKELEFVLADTLTCLFANYAAIWLSCPTVAVSAAKKGVAKSGGALQHWLASCPSNAFQKVVTEGGVSKSFSLYQRGAALIIPMPKLFAVGFGATLVGYGLVAGLENIQAARSRGEVTEGKAGEVKPAVPVLGSSLAIGTFLAVSTNIRYQVIAGAVEQRMFDAMARPGLSKLGSTF--VRSANLYVGSLTIVDWLRFVGLQ 880
L +A GR E + Q + AV GRIP E + +A L SP++ L G++ RLL D F+TK+AIE G ++ AE+++R +F KEL+FV AD + + A++ +WL PTV++ K +A S G + + SCP NAFQ + S+S+ QR A++ KLF VG GA+L+G G+ L NI+ A + +E + VPVL +S+A G ++AVS+N+RYQ++AG +EQRM + + L + VR+ N ++GSL VD+ R++G+Q
Sbjct: 88 LVLAEMGRGLESLPQDLAAAVEAGRIPGEIVRRFAELEKSPVLRWLLRFGGFKERLLADDLFLTKVAIECGVGIFTKTAAEWERRRDKFPKELDFVFADVVMAIIADFMLVWLPAPTVSL---KPPLALSAGPIAKFFYSCPDNAFQVALA----GTSYSVLQRVGAIVRNGSKLFVVGTGASLIGTGITNVLINIRKAFDKDFASEAED------VPVLSTSIAYGVYMAVSSNLRYQILAGIIEQRMLEPLLHNRKLALSAMCFAVRTGNTFLGSLMWVDYARWIGIQ 364
BLAST of mRNA_A-nodosum_M_contig1022.26.1 vs. uniprot
Match: A0A833R1V6_9POAL (Protein RETICULATA-RELATED 4 n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833R1V6_9POAL) HSP 1 Score: 179 bits (453), Expect = 1.700e-45 Identity = 115/290 (39.66%), Postives = 165/290 (56.90%), Query Frame = 2
Query: 17 LEIAAEGRRREKIRQRVDKAVRKGRIPKEYKQAYARLLSSPIMSVLCSNNGWRARLLGDRAFMTKLAIEMITGTVSQVVAEYQKRGKRFSKELEFVLADTLTCLFANYAAIWLSCPTVAVSAAKKGVAKSGGALQHWLASCPSNAFQKVVTEGGVSKSFSLYQRGAALIIPMPKLFAVGFGATLVGYGLVAGLENIQAARSRGEVTEGKAGEVKPAVPVLGSSLAIGTFLAVSTNIRYQVIAGAVEQRMFDAMARPGLSKLGSTF--VRSANLYVGSLTIVDWLRFVGLQ 880
L + A GR E + + A++ GRIP + + L SP+M L G++ RLL D F+TK+ IE G ++ AEY+KR + F KEL+FVLAD + L A++ +WL PTV++ K +A S G + + SCP NAFQ V G S+S QR A++ KLF VG GA+L+G GL L SR + AG V VP+L +S A G ++AVS+N+RYQ++AG +EQRM + + LG+ VR+ N ++GSL VD+ R+VG+Q
Sbjct: 103 LVLGAAGRGLETLPSDLAAAIKAGRIPGDIVTRFLELEKSPLMRWLLQFGGFKERLLADDLFLTKVGIECGVGIFTKTAAEYEKRKENFLKELDFVLADVIMALVADFMLVWLPAPTVSL---KPPLAVSAGPIAKFFYSCPDNAFQVVALSG---TSYSFLQRVGAILRNGSKLFGVGTGASLIGTGLTNAL-----IYSRKAFDKDFAG-VAEDVPILSTSAAYGVYMAVSSNLRYQILAGIIEQRMLEPLLHNQKLALGALCFAVRTGNTFLGSLMWVDYARWVGVQ 380
BLAST of mRNA_A-nodosum_M_contig1022.26.1 vs. uniprot
Match: A0A835H7S3_9MAGN (Uncharacterized protein n=2 Tax=Coptis chinensis TaxID=261450 RepID=A0A835H7S3_9MAGN) HSP 1 Score: 175 bits (444), Expect = 2.320e-44 Identity = 110/290 (37.93%), Postives = 168/290 (57.93%), Query Frame = 2
Query: 17 LEIAAEGRRREKIRQRVDKAVRKGRIPKEYKQAYARLLSSPIMSVLCSNNGWRARLLGDRAFMTKLAIEMITGTVSQVVAEYQKRGKRFSKELEFVLADTLTCLFANYAAIWLSCPTVAVSAAKKGVAKSGGALQHWLASCPSNAFQKVVTEGGVSKSFSLYQRGAALIIPMPKLFAVGFGATLVGYGLVAGLENIQAARSRGEVTEGKAGEVKPAVPVLGSSLAIGTFLAVSTNIRYQVIAGAVEQRMFDAMARPGLSKLGSTF--VRSANLYVGSLTIVDWLRFVGLQ 880
L +A GR E + + KAV GRIP + Y L SP L G+R RLL D F+ K+++E G ++ AEY+KR + F KEL+FV+AD + + A++ +WL PTV++ + +A S G + + SCP NAFQ V GG+S +SL QR A+ KLFAVG A+LVG G+ L ++R V + GEV+ +P++ +S+A G ++A+S+N+RYQ++AG +EQR+ + + L + VR+ N Y+GSL VD+ R++G+Q
Sbjct: 102 LALAQFGRSLENVPSDLVKAVESGRIPVSILERYFELKKSPFFKWLLQFGGFRERLLADDLFLAKISMECGVGIFTKTAAEYEKRKENFMKELDFVIADVVMAIVADFMLVWLPAPTVSL---RPPLAGSAGPIARFFFSCPDNAFQ--VALGGIS--YSLLQRIGAIARNGAKLFAVGTSASLVGTGVTNAL-----IKARKTVEKSFVGEVEE-LPIVSTSVAYGVYMAISSNLRYQLLAGVIEQRVLEPLLHQHKIVLSALCFAVRTGNTYLGSLLWVDYARWIGIQ 378
BLAST of mRNA_A-nodosum_M_contig1022.26.1 vs. uniprot
Match: A0A2T7EEC5_9POAL (Uncharacterized protein n=7 Tax=Paniceae TaxID=147428 RepID=A0A2T7EEC5_9POAL) HSP 1 Score: 176 bits (445), Expect = 2.450e-44 Identity = 106/288 (36.81%), Postives = 171/288 (59.38%), Query Frame = 2
Query: 23 IAAEGRRREKIRQRVDKAVRKGRIPKEYKQAYARLLSSPIMSVLCSNNGWRARLLGDRAFMTKLAIEMITGTVSQVVAEYQKRGKRFSKELEFVLADTLTCLFANYAAIWLSCPTVAVSAAKKGVAKSGGALQHWLASCPSNAFQKVVTEGGVSKSFSLYQRGAALIIPMPKLFAVGFGATLVGYGLVAGLENIQAARSRGEVTEGKAGEVKPAVPVLGSSLAIGTFLAVSTNIRYQVIAGAVEQRMFDAMARPGLSKLGSTF--VRSANLYVGSLTIVDWLRFVGLQ 880
+A GR+ E + + AV GR+P E + + L +SP+ L G++ RLL D F+TK+ IE G ++ AEY+KR + F KEL+FV+AD + + A++ +WL PTV++ + +A + GA+ + +CP NAFQ + S+SL QR A++ KLFAVG A+L+G G L ++R V++ AGEV+ +P++ +S+A G ++AVS+N+RYQ++AG +EQRM + + LG+ VR+ N ++GSL VD+ R++G+Q
Sbjct: 119 LAQLGRKLESLPADLAAAVEGGRVPGEIVRRFVDLEASPVFRWLLQFGGFKERLLADDLFLTKVGIECGVGIFTKTAAEYEKRRENFVKELDFVVADVIMAIVADFMLVWLPAPTVSL---RPPLAVNSGAIAKFFYNCPDNAFQVALA----GTSYSLLQRVGAIVRNGAKLFAVGTSASLIGTGATNAL-----IKARQAVSKDFAGEVEN-IPIVATSVAYGVYMAVSSNLRYQILAGVIEQRMLEPLLHRHKLVLGAMCFAVRTGNTFLGSLLWVDYARWIGIQ 393
BLAST of mRNA_A-nodosum_M_contig1022.26.1 vs. uniprot
Match: A0A7S3XYV0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XYV0_HETAK) HSP 1 Score: 172 bits (437), Expect = 2.750e-44 Identity = 102/270 (37.78%), Postives = 157/270 (58.15%), Query Frame = 2
Query: 74 AVRKGRIPKEYKQAYARLLSSPIMSVLCSNNGWRARLLGDRAFMTKLAIEMITGTVSQVVAEYQKRGKRFSKELEFVLADTLTCLFANYAAIWLSCPTVAVSAAKKGVAKSGGALQHWLASCPSNAFQKVVTEGGVSKSFSLYQRGAALIIPMPKLFAVGFGATLVGYGLVAGLENIQAARSRGEVTEGKAGEVKPAVPVLGSSLAIGTFLAVSTNIRYQVIAGAVEQRMFDAMA--RPGLSKLGSTFVRSANLYVGSLTIVDWLRFVGL 877
AV G++P + + + + S +M G+R RL+ D +F+TK A+E+ G V Q+ AE ++RG + ++L+FV+AD LTC+ AN+ A+WL+ PT+A A A G A++ + SCP NAFQKV T G F++ QR L+ P+LF VGF A++ G+G GL ++ + E G V VL +L IG +L VSTN+RYQ++AG +E+R+ A+ + L+ GS R+ N +VGS +V L++ GL
Sbjct: 31 AVVAGKLPVDALERFLKFEKSAVMGGFMKTAGFRNRLMNDPSFLTKCAMEIGIGGVCQLAAEVKERGDKLLQQLDFVVADVLTCVIANFMAVWLAAPTLAALAPPPAAA--GNAVKRFFDSCPGNAFQKV-TPGRAP--FTVAQRCGTLVGAFPQLFLVGFAASVAGFGFTLGLSKLREKLNPASAEEEPLGGPAKEVQVLKPALVIGAYLGVSTNVRYQLVAGLLEERLLGALFANQQFLNTAGSFIFRTGNTFVGSSQMVMTLKWTGL 295
BLAST of mRNA_A-nodosum_M_contig1022.26.1 vs. uniprot
Match: A0A6A4LPZ0_9ERIC (Uncharacterized protein (Fragment) n=1 Tax=Rhododendron williamsianum TaxID=262921 RepID=A0A6A4LPZ0_9ERIC) HSP 1 Score: 175 bits (444), Expect = 3.020e-44 Identity = 110/294 (37.41%), Postives = 169/294 (57.48%), Query Frame = 2
Query: 5 GDEELEIAAEGRRREKIRQRVDKAVRKGRIPKEYKQAYARLLSSPIMSVLCSNNGWRARLLGDRAFMTKLAIEMITGTVSQVVAEYQKRGKRFSKELEFVLADTLTCLFANYAAIWLSCPTVAVSAAKKGVAKSGGALQHWLASCPSNAFQKVVTEGGVSKSFSLYQRGAALIIPMPKLFAVGFGATLVGYGLVAGLENIQAARSRGEVTEGKAGEVKPAVPVLGSSLAIGTFLAVSTNIRYQVIAGAVEQRMFDAMARPGLSKLGSTF--VRSANLYVGSLTIVDWLRFVGLQ 880
G+ L + A GR + + + + A+ G+ P + Y L SPI L G++ RLL D F+TK+AIE G ++ AE ++R ++F+KEL+FV AD + + A++ +WL PTV++ + +A S G L + CP NAFQ + S+S QR A++ KLFAVG GA+LVG G+ GL N +R + + AGE + VP+L +S+A G ++AVS+N+RYQV+AG +EQR + + L +T VR+ N ++GSL VD+ R+VG+Q
Sbjct: 105 GEAMLVLMAVGRALDSLPKDLAAAIEAGKXPGSIVRRYFELEKSPIFRWLLQFGGFKERLLADDLFLTKVAIECGVGIFTKTAAEXERRREKFTKELDFVFADVVMAIIADFMLVWLPAPTVSL---RPALAVSAGPLAKFFYGCPDNAFQVALA----GTSYSFLQRVGAIVRNGAKLFAVGTGASLVGTGITNGLIN-----ARKAIDKTFAGEAED-VPILSTSVAYGVYMAVSSNLRYQVLAGVIEQRXLEPLLHQHKIWLSATCFAVRTGNTFLGSLMWVDYARWVGIQ 385 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1022.26.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1022.26.1 >prot_A-nodosum_M_contig1022.26.1 ID=prot_A-nodosum_M_contig1022.26.1|Name=mRNA_A-nodosum_M_contig1022.26.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=248bp MSVLCSNNGWRARLLGDRAFMTKLAIEMITGTVSQVVAEYQKRGKRFSKEback to top mRNA from alignment at A-nodosum_M_contig1022:162733..167586+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig1022.26.1 ID=mRNA_A-nodosum_M_contig1022.26.1|Name=mRNA_A-nodosum_M_contig1022.26.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=4854bp|location=Sequence derived from alignment at A-nodosum_M_contig1022:162733..167586+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig1022:162733..167586+ >mRNA_A-nodosum_M_contig1022.26.1 ID=mRNA_A-nodosum_M_contig1022.26.1|Name=mRNA_A-nodosum_M_contig1022.26.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=744bp|location=Sequence derived from alignment at A-nodosum_M_contig1022:162733..167586+ (Ascophyllum nodosum dioecious)back to top |