mRNA_A-nodosum_M_contig1020.12.1 (mRNA) Ascophyllum nodosum dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_A-nodosum_M_contig1020.12.1 vs. uniprot
Match: D7G749_ECTSI (Methyltransf_11 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G749_ECTSI) HSP 1 Score: 258 bits (658), Expect = 1.620e-85 Identity = 121/134 (90.30%), Postives = 130/134 (97.01%), Query Frame = 1 Query: 1 QRYSGLKDTITQYIRKDDNILMVGCGNSRLSEDMFDEGYTTITNIDVSRVVIEQMIARYRDKPALMWQAMNVCTLEYPDESFNSVIDKGTLDSVLCGEGSTANVAKMCMEISRVLKPNGVYFVCSYGVPDNRLQ 402 QRYSGLKD I+QY+RKDDNILMVGCGNSRLSEDMFD+G+TT+TNIDVSRVV+EQMIARYRDKPALMW MNVC L+YPDESFN+VIDKGTLDSVLCGEGSTANVAKMCMEISRVLKPNGVYF+CSYGVPDNRLQ Sbjct: 27 QRYSGLKDWISQYVRKDDNILMVGCGNSRLSEDMFDDGFTTLTNIDVSRVVVEQMIARYRDKPALMWSMMNVCALDYPDESFNAVIDKGTLDSVLCGEGSTANVAKMCMEISRVLKPNGVYFICSYGVPDNRLQ 160
BLAST of mRNA_A-nodosum_M_contig1020.12.1 vs. uniprot
Match: A0A7S2V7W5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V7W5_9STRA) HSP 1 Score: 223 bits (569), Expect = 5.130e-72 Identity = 105/134 (78.36%), Postives = 121/134 (90.30%), Query Frame = 1 Query: 1 QRYSGLKDTITQYIRKDDNILMVGCGNSRLSEDMFDEGYTTITNIDVSRVVIEQMIARYRDKPALMWQAMNVCTLEYPDESFNSVIDKGTLDSVLCGEGSTANVAKMCMEISRVLKPNGVYFVCSYGVPDNRLQ 402 QRYSG+KD I QYI K+DNILM G GNSRLSE+MFD+GYTTITNID+SRVVIEQMI R RDK AL WQ MNV +LE+PDESF++VIDKGT+DS+LCGEGSTAN AKMC+E+SRVLKPNGV+F+ SYGVP+NRLQ Sbjct: 25 QRYSGVKDLIAQYIHKEDNILMAGAGNSRLSEEMFDDGYTTITNIDISRVVIEQMIERCRDKAALTWQQMNVASLEFPDESFDAVIDKGTMDSILCGEGSTANCAKMCLEVSRVLKPNGVFFIVSYGVPENRLQ 158
BLAST of mRNA_A-nodosum_M_contig1020.12.1 vs. uniprot
Match: A0A6U1K5P8_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6U1K5P8_9STRA) HSP 1 Score: 208 bits (530), Expect = 4.360e-66 Identity = 95/144 (65.97%), Postives = 124/144 (86.11%), Query Frame = 1 Query: 1 QRYSGLKDTITQYIRKDDNILMVGCGNSRLSEDMFDEGYTTITNIDVSRVVIEQMIARYRDKPALMWQAMNVCTLEYPDESFNSVIDKGTLDSVLCGEGSTANVAKMCMEISRVLKPNGVYFVCSYGVPDNRLQVRTREVTSIT 432 QRYSG+++ + +Y++KDD +LM GCGNSRLSEDMF++G+ I+N+D+SRVVI+QM +Y+DKPAL +Q MNVC+LE+PDESF++VI KGT+D++LCGEGSTANVAKMCME+SRVLKP+G+ FV SYGVPDNR+Q E S T Sbjct: 25 QRYSGIQELLQKYVKKDDAVLMAGCGNSRLSEDMFEDGFANISNVDISRVVIDQMGDKYKDKPALTFQQMNVCSLEFPDESFDAVIVKGTMDAILCGEGSTANVAKMCMEVSRVLKPSGILFVVSYGVPDNRMQYLENEDYSWT 168
BLAST of mRNA_A-nodosum_M_contig1020.12.1 vs. uniprot
Match: A0A835ZP38_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZP38_9STRA) HSP 1 Score: 209 bits (533), Expect = 6.940e-66 Identity = 93/134 (69.40%), Postives = 119/134 (88.81%), Query Frame = 1 Query: 1 QRYSGLKDTITQYIRKDDNILMVGCGNSRLSEDMFDEGYTTITNIDVSRVVIEQMIARYRDKPALMWQAMNVCTLEYPDESFNSVIDKGTLDSVLCGEGSTANVAKMCMEISRVLKPNGVYFVCSYGVPDNRLQ 402 QRYSG+KD + ++ +DN+LM+GCGNSRLSEDM ++G+T+ITNID+SRVVI+QMI R++DKPAL+WQ MN LEYPDESF++ +DKGTLDS++CGEG++ANVAKMCME+SRVLKPNGVY V SYG PD+RL+ Sbjct: 72 QRYSGIKDLVAAQMKHEDNVLMLGCGNSRLSEDMLEDGFTSITNIDISRVVIDQMIERHKDKPALVWQRMNAMALEYPDESFDAAVDKGTLDSLMCGEGASANVAKMCMEVSRVLKPNGVYLVISYGAPDSRLK 205
BLAST of mRNA_A-nodosum_M_contig1020.12.1 vs. uniprot
Match: A0A7S2GCN9_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2GCN9_9STRA) HSP 1 Score: 207 bits (528), Expect = 8.780e-66 Identity = 97/144 (67.36%), Postives = 121/144 (84.03%), Query Frame = 1 Query: 1 QRYSGLKDTITQYIRKDDNILMVGCGNSRLSEDMFDEGYTTITNIDVSRVVIEQMIARYRDKPALMWQAMNVCTLEYPDESFNSVIDKGTLDSVLCGEGSTANVAKMCMEISRVLKPNGVYFVCSYGVPDNRLQVRTREVTSIT 432 QRYSGL + + +Y++KDD ILM G GNSRLSEDM+++GY TITNID+SRVV++QMI RY+DK AL +Q MNVC+LE+PDESF++V KGT+D++LCGEGSTANVAKMC E+SRVLK +GV+F+ SYGVPDNRLQ E S T Sbjct: 25 QRYSGLSELLNKYVKKDDTILMAGAGNSRLSEDMYEDGYQTITNIDISRVVVDQMIDRYKDKAALTYQQMNVCSLEFPDESFDAVTAKGTMDAILCGEGSTANVAKMCQEVSRVLKAHGVFFIVSYGVPDNRLQYLENEDYSWT 168
BLAST of mRNA_A-nodosum_M_contig1020.12.1 vs. uniprot
Match: A0A7S2AN98_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AN98_9STRA) HSP 1 Score: 206 bits (523), Expect = 5.050e-65 Identity = 94/139 (67.63%), Postives = 119/139 (85.61%), Query Frame = 1 Query: 1 QRYSGLKDTITQYIRKDDNILMVGCGNSRLSEDMFDEGYTTITNIDVSRVVIEQMIARYRDKPALMWQAMNVCTLEYPDESFNSVIDKGTLDSVLCGEGSTANVAKMCMEISRVLKPNGVYFVCSYGVPDNRLQVRTRE 417 QRYSG+ +TI +YI+KDD ILM G GNSRLSEDM+++GY TITNID+SRVV++QM+ +YRDK L +Q MNVC+LE+PDESF++V+ KGT+D++LCGEGSTANVAKMC E+SRVLK +GV+ + SYGVPDNRLQ E Sbjct: 25 QRYSGMAETIQKYIKKDDQILMAGAGNSRLSEDMYEDGYNTITNIDISRVVVDQMVDKYRDKTPLPYQQMNVCSLEFPDESFDAVVAKGTMDAILCGEGSTANVAKMCQEVSRVLKVHGVFIIVSYGVPDNRLQYLDNE 163
BLAST of mRNA_A-nodosum_M_contig1020.12.1 vs. uniprot
Match: A0A7S3M8V2_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M8V2_9STRA) HSP 1 Score: 204 bits (520), Expect = 1.490e-64 Identity = 95/139 (68.35%), Postives = 116/139 (83.45%), Query Frame = 1 Query: 1 QRYSGLKDTITQYIRKDDNILMVGCGNSRLSEDMFDEGYTTITNIDVSRVVIEQMIARYRDKPALMWQAMNVCTLEYPDESFNSVIDKGTLDSVLCGEGSTANVAKMCMEISRVLKPNGVYFVCSYGVPDNRLQVRTRE 417 QRYSG++D I QY++++D ILM G GNSRL+EDMF++GY+TITNIDVSRVVI+Q I RY+DKP L WQ MNV L++PDE+F+ VI K TLD+VLCGEGSTANVAK C E+SRVLKP GV+F+ SYGVPDNRL +E Sbjct: 25 QRYSGIRDFINQYVKREDVILMAGAGNSRLTEDMFEDGYSTITNIDVSRVVIDQQIERYKDKPTLQWQQMNVTALDFPDETFDVVIAKATLDAVLCGEGSTANVAKFCSEVSRVLKPTGVFFIVSYGVPDNRLNYLEKE 163
BLAST of mRNA_A-nodosum_M_contig1020.12.1 vs. uniprot
Match: A0A7R9UCD5_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UCD5_9STRA) HSP 1 Score: 202 bits (514), Expect = 1.640e-62 Identity = 93/139 (66.91%), Postives = 117/139 (84.17%), Query Frame = 1 Query: 1 QRYSGLKDTITQYIRKDDNILMVGCGNSRLSEDMFDEGYTTITNIDVSRVVIEQMIARYRDKPALMWQAMNVCTLEYPDESFNSVIDKGTLDSVLCGEGSTANVAKMCMEISRVLKPNGVYFVCSYGVPDNRLQVRTRE 417 QRYSGLKDT+ Q+++K+D+ILM CG+SRL+EDM+++G+T I NID S+VVIEQM R DKPAL WQ MNV LE+PDESF++VI K T+D++LCGEGSTANVAKMC E+SRVLKP+GV+F+ SYGVPDNRL +E Sbjct: 108 QRYSGLKDTMDQFMKKEDSILMASCGSSRLTEDMYEDGFTNIVNIDASKVVIEQMTQRCEDKPALTWQVMNVMALEFPDESFDAVIAKATMDAILCGEGSTANVAKMCTEVSRVLKPSGVFFIVSYGVPDNRLNYLEQE 246
BLAST of mRNA_A-nodosum_M_contig1020.12.1 vs. uniprot
Match: F0Y4J9_AURAN (Methyltransf_11 domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y4J9_AURAN) HSP 1 Score: 196 bits (499), Expect = 6.850e-62 Identity = 92/139 (66.19%), Postives = 117/139 (84.17%), Query Frame = 1 Query: 1 QRYSGLKDTITQYIRKDDNILMVGCGNSRLSEDMFDEGYTTITNIDVSRVVIEQMIARYRDKPALMWQAMNVCTLEYPDESFNSVIDKGTLDSVLCGEGSTANVAKMCMEISRVLKPNGVYFVCSYGVPDNRLQVRTRE 417 QRYSG++ + +DD+ILM GCGNSRLSEDMF++GY ++NID+SRV I+QM +Y+DKPAL +Q MNVC+LE+PDESF++VI KG +D++LCGEGSTANVAKMCME+SRVLKPNG++FV SYGVPDNR+Q E Sbjct: 21 QRYSGIQARRGAGMERDDSILMAGCGNSRLSEDMFEDGYANLSNIDISRV-IDQMSEKYKDKPALSFQQMNVCSLEFPDESFDAVIAKGVMDAILCGEGSTANVAKMCMEVSRVLKPNGIFFVVSYGVPDNRMQYLENE 158
BLAST of mRNA_A-nodosum_M_contig1020.12.1 vs. uniprot
Match: A0A7S3K5J8_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K5J8_9STRA) HSP 1 Score: 197 bits (502), Expect = 8.890e-62 Identity = 93/140 (66.43%), Postives = 117/140 (83.57%), Query Frame = 1 Query: 1 QRYSGLKDTITQYIRKDDNILMVGCGNSRLSEDMFDEGYTTITNIDVSRVVIEQMIARYRDKP-ALMWQAMNVCTLEYPDESFNSVIDKGTLDSVLCGEGSTANVAKMCMEISRVLKPNGVYFVCSYGVPDNRLQVRTRE 417 QRYSGL + +++YI++DD ILM GCGNSR++EDM ++GYT+ITNIDVSRVVI+QM +Y+DK ++Q MNVC LE+PDESF+++I KG +D++LCGEGSTANVAKMCME SRVLKPNGV F+ SYG PDNRLQ E Sbjct: 25 QRYSGLSEIMSKYIKRDDAILMAGCGNSRMTEDMIEDGYTSITNIDVSRVVIDQMKEKYKDKKDTFIYQIMNVCGLEFPDESFDAIIAKGVMDAILCGEGSTANVAKMCMEASRVLKPNGVLFIVSYGFPDNRLQYLDNE 164 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1020.12.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1020.12.1 >prot_A-nodosum_M_contig1020.12.1 ID=prot_A-nodosum_M_contig1020.12.1|Name=mRNA_A-nodosum_M_contig1020.12.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=145bp QRYSGLKDTITQYIRKDDNILMVGCGNSRLSEDMFDEGYTTITNIDVSRVback to top mRNA from alignment at A-nodosum_M_contig1020:134199..135083+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig1020.12.1 ID=mRNA_A-nodosum_M_contig1020.12.1|Name=mRNA_A-nodosum_M_contig1020.12.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=885bp|location=Sequence derived from alignment at A-nodosum_M_contig1020:134199..135083+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig1020:134199..135083+ >mRNA_A-nodosum_M_contig1020.12.1 ID=mRNA_A-nodosum_M_contig1020.12.1|Name=mRNA_A-nodosum_M_contig1020.12.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=435bp|location=Sequence derived from alignment at A-nodosum_M_contig1020:134199..135083+ (Ascophyllum nodosum dioecious)back to top |