mRNA_A-nodosum_M_contig102.53.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig102.53.1 vs. uniprot
Match: D7FJ17_ECTSI (DUF5745 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ17_ECTSI) HSP 1 Score: 667 bits (1721), Expect = 5.640e-227 Identity = 396/578 (68.51%), Postives = 434/578 (75.09%), Query Frame = 3
Query: 270 MSGASHSPPDSSLDEASEEGFILASINTLLNRVGISAKPINSFEELRKSASSMFVAIFEAMFQVRQRGVVRKPAHVHNYVHNAQMVVDALAGPILNMDLSHITGEAIVRGDTVAIRNLVDIFMGINEVVTKRQGRPQGTPPASDFRSESHRHQGVEHGQQLHQGQ--EPMLYQLSSRPLTSPRSRSSHLSQPQPATRMAGRGXXXXXXXXXXXXXXXXXXXXEGRVRPAMLGAVGHRGLDKRKEERVVGDGYIDESMDRNELSPFLTELESSSSPPGEGLTAQDILKAQRMYEG-DGNFG--VGINAAPEPLRHVGLEMQRHAHRQEEEREMKYRRYYQSVLKDRLTELRKRELADARKQSFAHKNAIHLARVRKIKKDRFEEKLRLARLSQRFRFRDEGRRRLTHLYKKILTALHRQRKEDDREDAARLKALHLAWQAQSDDLEKFFNERVELIVGHEKSSSRERAQAIASAEKELSDLFHHAERDYEARLMSQLELQAVGMAAEERHHAEVQHAYKELLQMEDWSGASRDRFLGVRPNTAFEQRLKQVRGKADKTRARLNKEKKMRELAKAYGKAS 1988
MSGAS SPPDSSLDEA+EEGFILASINTLLNRVGISAKPINSFEELRKSASSMFVAIFEAMFQVRQRGVVRKPAHVHNYVHNAQMVVDALAGPILNMDLSHITGEAIVRGDTVAIRNLVDIFMGI+EVV KRQ RP G P A +F + S R GQ Q Q + + SS P P + S Q ATR++ G VRP H GL + DG +DES+ R+ELSPF E E SSP GE LTA+DIL+A RM+E +G F ++ PLR L M R +RQEE+REMKYRRYYQ VLKDRLT LRKRELADARKQ FAH+NA H+A+VR+IKK+R EEKLRLARLSQR +DEGR RL+ LYKKILTALHRQRKEDDREDAARLKALHLAWQAQSDDLEKFF ERVELIV HE+ S RERAQ +A E+ELSDLF AE DYEARL SQLE QAV AAEER+HAEVQHAYKELL MEDWSGASRDRFLGVRPNTAFEQRLKQVR +AD R+R+ KE+K R L +AYG+ S
Sbjct: 1 MSGASPSPPDSSLDEATEEGFILASINTLLNRVGISAKPINSFEELRKSASSMFVAIFEAMFQVRQRGVVRKPAHVHNYVHNAQMVVDALAGPILNMDLSHITGEAIVRGDTVAIRNLVDIFMGISEVVIKRQARPDGGPAAQEFWAGSRRRLKARQGQPQLQQQXXQAQHHGTSSHP---PPTASRFSRHRQHATRVSDTGRGDREHGLG--------------VRPPR-----HEGLQESDH-----DG-LDESLGRSELSPFRGETELKSSPSGEALTARDILEAHRMFEEREGVFERPEDVDVQQGPLRGEQLGMDRRVNRQEEDREMKYRRYYQRVLKDRLTALRKRELADARKQRFAHQNATHVAKVRQIKKERLEEKLRLARLSQRLHLQDEGRGRLSDLYKKILTALHRQRKEDDREDAARLKALHLAWQAQSDDLEKFFKERVELIVEHEQGSGRERAQTMALEERELSDLFRRAEMDYEARLSSQLEQQAVEAAAEERYHAEVQHAYKELLHMEDWSGASRDRFLGVRPNTAFEQRLKQVRVRADTARSRMKKERKHRNLNRAYGRGS 550
BLAST of mRNA_A-nodosum_M_contig102.53.1 vs. uniprot
Match: A0A6H5KDB6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDB6_9PHAE) HSP 1 Score: 342 bits (877), Expect = 2.950e-105 Identity = 210/326 (64.42%), Postives = 228/326 (69.94%), Query Frame = 3
Query: 936 RVRPAMLGAVGHRGLDKRKEERVVGDGYIDESMDRNELSPFLTELESSSSPPGEGLTAQDILKAQRMYEGDGNF---GVGINAAPEPLRHVGLEMQRHAHRQEEEREMKYRRYYQSVLKDRLTELRKRELADARKQSFAHKNAIHLARVRKIKKDRFEEKLRLARLSQRFRFRDEGRRRLTHLYKKILTALHRQRKEDDREDAARLKALHLAWQAQSDDLEKFFNERVELIVGHEKSSSRERAQAIASAEKELSDLFHHAERDYEARLMSQLELQAVGMAAEERHHAEVQHAYKELLQMEDWSGASRDRFLGVRPNTAFEQRLKQV 1904
RVRP H GL + DG +DES+ R+ELSPF E E SSP GE LTA+DIL+A RM+E G ++ PLR L + R RQEE+REMKYRRYYQ VLKDRLT LRK IKK+R EEKLRLARLSQR +DEGR RL+ LYKKILTALHRQRKEDDREDAARLKALHLAWQAQSDDLEKFF ERVELIV HE+ S RERAQ +AS E+ELSDLF AE DYEARL SQ AV AAEER+HAEVQHAYKELLQMEDWSGASRDRFLGVRPNTAFEQRLKQ
Sbjct: 19 RVRPPA-----HEGLQESDH-----DG-LDESLGRSELSPFRGETELKSSPSGEALTARDILEAHRMFEEQGEGFERREDVDVQQGPLRGEQLGLDRRVSRQEEDREMKYRRYYQRVLKDRLTALRK------------------------IKKERLEEKLRLARLSQRLHLQDEGRGRLSDLYKKILTALHRQRKEDDREDAARLKALHLAWQAQSDDLEKFFKERVELIVEHEQGSGRERAQTMASEERELSDLFRRAEMDYEARLSSQ----AVEAAAEERYHAEVQHAYKELLQMEDWSGASRDRFLGVRPNTAFEQRLKQA 305
BLAST of mRNA_A-nodosum_M_contig102.53.1 vs. uniprot
Match: A0A6H5KJC8_9PHAE (DUF5745 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJC8_9PHAE) HSP 1 Score: 251 bits (640), Expect = 2.160e-73 Identity = 130/134 (97.01%), Postives = 132/134 (98.51%), Query Frame = 3
Query: 270 MSGASHSPPDSSLDEASEEGFILASINTLLNRVGISAKPINSFEELRKSASSMFVAIFEAMFQVRQRGVVRKPAHVHNYVHNAQMVVDALAGPILNMDLSHITGEAIVRGDTVAIRNLVDIFMGINEVVTKRQG 671
MSGAS SPPDSSLDEA+EEGFILASINTLLNRVGISAKPINSFEELRKSASSMFVAIFEAMFQVRQRGVVRKPAHVHNYVHNAQMVVDALAGPILNMDLSHITGEAIVRGDTVAIRNLVDIFMGI+EVV KRQG
Sbjct: 1 MSGASPSPPDSSLDEATEEGFILASINTLLNRVGISAKPINSFEELRKSASSMFVAIFEAMFQVRQRGVVRKPAHVHNYVHNAQMVVDALAGPILNMDLSHITGEAIVRGDTVAIRNLVDIFMGISEVVIKRQG 134
BLAST of mRNA_A-nodosum_M_contig102.53.1 vs. uniprot
Match: A0A835Z720_9STRA (DUF5745 domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z720_9STRA) HSP 1 Score: 142 bits (358), Expect = 9.370e-36 Identity = 73/133 (54.89%), Postives = 96/133 (72.18%), Query Frame = 3
Query: 303 SLDEASEEGFILASINTLLNRVGISAKPINSFEELRKSASSMFVAIFEAMFQVRQRGVVRKPAHVHNYVHNAQMVVDALAGPILNMDLSHITGEAIVRGDTVAIRNLVDIFMGINEVVTK---RQGRPQGTPP 692
S A+E+ +L INTLL RVGI AKPI SF E++KSASSMFVAIFE MF+V + G+VRKP + +YV NAQ+++DAL IL+++L H+TG A+ RGD AI NLVDIF GI+++V K + R G+ P
Sbjct: 2 SSPHAAEDEVLLRKINTLLTRVGIPAKPITSFNEVKKSASSMFVAIFEGMFKVTREGIVRKPTQLQDYVRNAQVIIDALDKEILHINLDHVTGAAVARGDAQAIHNLVDIFFGISDMVLKFRQQDSRGGGSSP 134
BLAST of mRNA_A-nodosum_M_contig102.53.1 vs. uniprot
Match: A0A7S4DH09_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DH09_HETAK) HSP 1 Score: 141 bits (356), Expect = 2.310e-34 Identity = 70/119 (58.82%), Postives = 93/119 (78.15%), Query Frame = 3
Query: 312 EASEEGFILASINTLLNRVGISAKPINSFEELRKSASSMFVAIFEAMFQVRQRGVVRKPAHVHNYVHNAQMVVDALAGPILNMDLSHITGEAIVRGDTVAIRNLVDIFMGINEVVTKRQ 668
E SEE I+A+ N LL VGI AKPI+SF+EL++ ASSMFVA+FEAMF +R +G++R+P +YVHNAQMV+DAL+ IL M+L HITG+ IV GD + I+N+VDI +GI+EV KR+
Sbjct: 20 ELSEENVIVANTNELLQAVGIYAKPISSFQELQRIASSMFVAVFEAMFDIRLKGIIREPGSRSDYVHNAQMVIDALSKSILKMNLVHITGDLIVDGDPIGIKNMVDILIGISEVWLKRR 138
BLAST of mRNA_A-nodosum_M_contig102.53.1 vs. uniprot
Match: A0A2D4CC91_PYTIN (DUF5745 domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CC91_PYTIN) HSP 1 Score: 92.8 bits (229), Expect = 9.320e-18 Identity = 47/110 (42.73%), Postives = 73/110 (66.36%), Query Frame = 3
Query: 333 ILASINTLLNRVGISAKPINSFEELRKSASSMFVAIFEAMFQVRQRGVVRKPAHVHNYVHNAQMVVDALAGPILN--MDLSHITGEAIVRGDTVAIRNLVDIFMGINEVV 656
+L N LL+R+G A+ +++L S SSM VA++E +FQ R GVVR P+ V +Y HNAQ+VVDAL+G +L+ D +H++GE++ GD +I LV + I++V+
Sbjct: 41 VLLQTNALLDRLGFGARSFEDYDDLVASVSSMSVALYEKLFQFRLEGVVRVPSSVTDYAHNAQLVVDALSGALLDEDFDAAHLSGESLCSGDVDSIAQLVRMLEHIHDVL 150
BLAST of mRNA_A-nodosum_M_contig102.53.1 vs. uniprot
Match: A0A2R5GFQ7_9STRA (Centrosomal protein of 95 kDa n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GFQ7_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 3.310e-16 Identity = 59/123 (47.97%), Postives = 80/123 (65.04%), Query Frame = 3
Query: 267 AMSGASHSPPDSSLDEASEEGFILASINTLLNRVGISAKPINSFEELRKSASSMFVAIFEAMFQVRQRGVVRKPAHVHNYVHNAQMVVDALAGPILNMDLSHITGEAIVRGDTVAIRNLVDIF 635
A G SH P D D A E I+ N L ++ I+ +PI +FEEL+KSASSMFVAIFE +F VR + V+RKP V +Y+ NA +V+ AL+ L +DLS ++GE I RGD V I +++ IF
Sbjct: 81 ATVGGSH-PVDE--DPAFYE-HIVQRTNDLFVKLNITTRPIQAFEELQKSASSMFVAIFETLFNVRLKNVIRKPRVVTDYITNANLVMTALSES-LPIDLSFLSGEDIYRGDPVQIHHMLSIF 198
BLAST of mRNA_A-nodosum_M_contig102.53.1 vs. uniprot
Match: A0A2D4BTL5_PYTIN (DUF5745 domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BTL5_PYTIN) HSP 1 Score: 90.9 bits (224), Expect = 1.100e-15 Identity = 46/108 (42.59%), Postives = 71/108 (65.74%), Query Frame = 3
Query: 333 ILASINTLLNRVGISAKPINSFEELRKSASSMFVAIFEAMFQVRQRGVVRKPAHVHNYVHNAQMVVDALAGPILN--MDLSHITGEAIVRGDTVAIRNLVDIFMGINE 650
+L N LL+R+G A+ +++L S SSM VA++E +FQ R GVVR P+ V +Y HNAQ+VVDAL+G +L+ D +H++GE++ GD +I LV + I++
Sbjct: 41 VLLQTNALLDRLGFGARSFEDYDDLVASVSSMSVALYEKLFQFRLEGVVRVPSSVTDYAHNAQLVVDALSGALLDEDFDAAHLSGESLCSGDVDSIAQLVRMLEHIHD 148
BLAST of mRNA_A-nodosum_M_contig102.53.1 vs. uniprot
Match: A0A7S2WBU4_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WBU4_9STRA) HSP 1 Score: 91.7 bits (226), Expect = 2.900e-15 Identity = 48/101 (47.52%), Postives = 72/101 (71.29%), Query Frame = 3
Query: 333 ILASINTLLNRVGISAKPINSFEELRKSASSMFVAIFEAMFQVRQRGVVRKPAHVHNYVHNAQMVVDALAGPILNMDLSHITGEAIVRGDTVAIRNLVDIF 635
I+ N L ++ I+ +PI +FEEL+KSASSMFVAIFE +F VR + V+RKP V +Y+ NA++V+ AL+ L +DLS+++ EAI RG+ I +++ IF
Sbjct: 57 IVRRTNELFVKLNITTRPIQAFEELQKSASSMFVAIFETLFNVRLKNVIRKPRVVTDYITNAELVMTALSES-LPVDLSYLSSEAIYRGEPKHIHHMLSIF 156
BLAST of mRNA_A-nodosum_M_contig102.53.1 vs. uniprot
Match: A0A1V9YQH6_9STRA (DUF5745 domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YQH6_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 1.220e-14 Identity = 47/124 (37.90%), Postives = 71/124 (57.26%), Query Frame = 3
Query: 333 ILASINTLLNRVGISAKPINSFEELRKSASSMFVAIFEAMFQVRQRGVVRKPAHVHNYVHNAQMVVDALAGPILNMDLSHITGEAIVRGDTVAIRNLVDIFMGINEVVTKRQGRPQGTPPASDF 704
+L N LL G + + +EL S SSM VA+FE +F +R +GVVR+P +Y +NAQ+V+DALA +L DLSH+ G+ + GD +IR LV + + ++ ++ R SDF
Sbjct: 5 VLQETNALLRLTGFGDRIFRALDELVASVSSMSVALFERLFDLRLKGVVREPHSHEDYCNNAQLVIDALAEAVLTEDLSHVNGQLVCDGDLKSIRELVRVLSHVYHML--QRSRHDDASSESDF 126 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig102.53.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig102.53.1 >prot_A-nodosum_M_contig102.53.1 ID=prot_A-nodosum_M_contig102.53.1|Name=mRNA_A-nodosum_M_contig102.53.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=574bp MSGASHSPPDSSLDEASEEGFILASINTLLNRVGISAKPINSFEELRKSAback to top mRNA from alignment at A-nodosum_M_contig102:258093..266966+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig102.53.1 ID=mRNA_A-nodosum_M_contig102.53.1|Name=mRNA_A-nodosum_M_contig102.53.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=8874bp|location=Sequence derived from alignment at A-nodosum_M_contig102:258093..266966+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig102:258093..266966+ >mRNA_A-nodosum_M_contig102.53.1 ID=mRNA_A-nodosum_M_contig102.53.1|Name=mRNA_A-nodosum_M_contig102.53.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1722bp|location=Sequence derived from alignment at A-nodosum_M_contig102:258093..266966+ (Ascophyllum nodosum dioecious)back to top |