mRNA_A-nodosum_M_contig102.52.3 (mRNA) Ascophyllum nodosum dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_A-nodosum_M_contig102.52.3 vs. uniprot
Match: D7FJ18_ECTSI (CCR4-NOT transcription complex subunit 11 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJ18_ECTSI) HSP 1 Score: 782 bits (2020), Expect = 7.310e-282 Identity = 399/450 (88.67%), Postives = 413/450 (91.78%), Query Frame = 1 Query: 1 MLETQELTPLLQLLNDEDDILENVAQKFHRIFTRNDHFKVGCALCILLCDNLLTRTQRVVSFSILCDLYRNEPNGTNPFLPFFLEAIENGTDFVEKQYLVHLLCSPPTNRNSARKTARQVIADYEATPAEAVSVPDLSALRQLYSERNPAVPSLRTAGVRPVLPDPVVGDEEVGSWLPPRPEDQAARGSGGGALRAGLPGKGGAAAPIQPLTLDEMCLSDGAWGGSMSLASFEPEFMRPVPPLLPITDSEVMWINPDYAPGLLWDTSMGQDSSKGAQVRDVMVKAFNGPLLPIQQQQVLNELQADARLVYHCGLTPSKLPDLVENNPMIAIECLLKLMSSSQITEYLSALVNMDMSLHSMEVVNRLTTSVDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVEDLFIEVQAFCIEFSRIREAAGLFRLLKTLE 1350 ML++QELTPLLQLLNDEDDILENVAQKFHR FTRNDHFKVGCALCILLCDNLLT TQRVVSFSILCDLYRN+ NGTNPFLPFFLEAIE GTD VE+QYLVHLLCSPPTNRNSARK A QVIA+YE TPAEAV VPDLSALRQLYSE+NPAVPSLRTAGVRPVL DP EVGSWLPPRPE+Q R GG ALR G+ GK A PIQPLTLD+M LS G GGS+SLASFEPEFMRPVPP+LPI DSEVMW+NPDYAP LLWDTSMGQDSSKGA+VRDVM KAF GPLLP QQQQVL+ELQ DARLVYHCGLTP KLPDLVENNPMIAIECLLKLMSSSQITEYLSALVNMDMSLHSMEVVNRLTTSVDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVEDLFIEVQAFCIEFSRIREAAGLFRLLKTLE Sbjct: 1 MLDSQELTPLLQLLNDEDDILENVAQKFHRTFTRNDHFKVGCALCILLCDNLLTHTQRVVSFSILCDLYRNDANGTNPFLPFFLEAIEKGTDPVERQYLVHLLCSPPTNRNSARKNALQVIAEYEGTPAEAVEVPDLSALRQLYSEKNPAVPSLRTAGVRPVLADPSESSNEVGSWLPPRPEEQVGRAPGGAALRGGVGGKREAPTPIQPLTLDDMRLSKGGRGGSLSLASFEPEFMRPVPPMLPIADSEVMWLNPDYAPRLLWDTSMGQDSSKGAEVRDVMAKAFKGPLLPTQQQQVLSELQGDARLVYHCGLTPFKLPDLVENNPMIAIECLLKLMSSSQITEYLSALVNMDMSLHSMEVVNRLTTSVDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVEDLFIEVQAFCIEFSRIREAAGLFRLLKTLE 450
BLAST of mRNA_A-nodosum_M_contig102.52.3 vs. uniprot
Match: A0A2D4BNE6_PYTIN (CCR4-NOT transcription complex subunit 11 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BNE6_PYTIN) HSP 1 Score: 527 bits (1358), Expect = 2.070e-181 Identity = 283/462 (61.26%), Postives = 344/462 (74.46%), Query Frame = 1 Query: 1 MLETQELTPLLQLLNDEDDILENVAQKFHRIFTRNDHFKVGCALCILLCDNLLTRTQRVVSFSILCDLYRNEPNGTNPFLPFFLEAIENGTDFVEKQYLVHLLCSPPTNRNSARKTARQVIADYEATPAEAVSVPDLSALRQLYSERNPAVPSLRTAGVRPVLPDPVVGDEE-----VGSWLPPRPEDQAARGSGGGALRAGLPGKGGAAAPIQPLTLDEMCLSDGAWG-------GSMSLASFEPEFMRPVPPLLPITDSEVMWINPDYAPGLLWDTSMGQDSSKGAQVRDVMVKAFNGPLLPIQQQQVLNELQADARLVYHCGLTPSKLPDLVENNPMIAIECLLKLMSSSQITEYLSALVNMDMSLHSMEVVNRLTTSVDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVEDLFIEVQAFCIEFSRIREAAGLFRLLKTLE 1350 MLE +EL PLL +LN++D LE V+ F R FT+NDHFKVGC +CILL DNLLT +QR+V FSILCDLYRNE TNPFLP FLEA+E GTD E ++LVHLL S P+NR +++++A+ ++++ A ++ + DL ALR++Y E+ P VP LR AG+R V+ D + +E +PP +P + LT++EM LS A G GS+SL FEP+FMR PP++ +E++W+NPDY P LLWD +M +DSS G ++R++M AF GP +P QQQ+VL +L+AD +LVYHC LTP +LPDLVENNPMIAIECLLKLMSS+QITEYLSALVNMDMSLHSMEVVNRLTT+VDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINV+DL IEVQAFCIEFSRIREAAGLFRLLKTLE Sbjct: 1 MLEARELRPLLTILNEDDKPLEQVSSAFSRTFTKNDHFKVGCTICILLQDNLLTSSQRIVGFSILCDLYRNEAASTNPFLPVFLEALEKGTDPCETKFLVHLLSSTPSNRETSKRSAKTILSELRANSSQ-IPPFDLEALRKVYKEKTPPVPQLRGAGIRNVVTDSELDLQEHLNTSANVHVPPNE-----------VCMLNVP-------CAEELTIEEMGLSLDAAGAAGAPSAGSLSLQGFEPKFMRLPPPIMEPDMTELIWLNPDYCPTLLWDGTMFEDSSHGMELRELMAXAFVGPXIPSQQQKVLADLEADPKLVYHCSLTPQRLPDLVENNPMIAIECLLKLMSSNQITEYLSALVNMDMSLHSMEVVNRLTTAVDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVQDLIIEVQAFCIEFSRIREAAGLFRLLKTLE 443
BLAST of mRNA_A-nodosum_M_contig102.52.3 vs. uniprot
Match: A0A8K1CP59_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CP59_PYTOL) HSP 1 Score: 524 bits (1350), Expect = 2.730e-180 Identity = 278/454 (61.23%), Postives = 343/454 (75.55%), Query Frame = 1 Query: 1 MLETQELTPLLQLLNDEDDILENVAQKFHRIFTRNDHFKVGCALCILLCDNLLTRTQRVVSFSILCDLYRNEPNGTNPFLPFFLEAIENGTDFVEKQYLVHLLCSPPTNRNSARKTARQVIADYEATPAEAVSVPDLSALRQLYSERNPAVPSLRTAGVRPVLPDPVVGDEEV---GSWLPPRPEDQAARGSGGGALRAGLPGKGGAAAPIQPLTLDEMCLS-DGAWGGSMSLASFEPEFMRPVPPLLPITDSEVMWINPDYAPGLLWDTSMGQDSSKGAQVRDVMVKAFNGPLLPIQQQQVLNELQADARLVYHCGLTPSKLPDLVENNPMIAIECLLKLMSSSQITEYLSALVNMDMSLHSMEVVNRLTTSVDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVEDLFIEVQAFCIEFSRIREAAGLFRLLKTLE 1350 MLET+EL PLL +LN+++ LE V F R FT+NDHFKVGC +CILL DNLLT +QR+V SIL DLYR+E GTNPFLP F E +E G+D EK++++HLL +P NR S++K A+ ++A++ A + V D+ AL+ Y ER PAVP R AG+R V+ D + +E G+ + P + +A +P + L+++EM L+ + S+SL SFEP FMR PP++ +E++W+NPDY P +LWD++M +DSS G ++R++M KAF GPL+P QQQ+VL EL+AD +LVYHC LTP +LPDLVENNPMIAIECLLKLMSS+QITEYLSALVNMDMSLHSMEVVNRLTT+VDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINV+DL IEVQAFCIEFSRIREAAGLFRLLKTLE Sbjct: 1 MLETRELRPLLAILNEDEKPLEQVGSSFARTFTKNDHFKVGCTICILLQDNLLTSSQRIVGLSILSDLYRSENTGTNPFLPVFFEVLEKGSDLSEKRFVLHLLSTPSANRESSKKGAKTLLAEFRANASPVAQV-DIDALKNAYKERTPAVPQFRAAGMRNVVTDTELDLQEQLNNGANVHIPPNEVSA---------LNVPS-------FEELSIEEMGLTGENGAPASLSLLSFEPSFMRLPPPIMEPEMTELIWLNPDYCPTVLWDSTMFEDSSHGLELRELMAKAFVGPLIPSQQQKVLAELEADPKLVYHCSLTPQRLPDLVENNPMIAIECLLKLMSSNQITEYLSALVNMDMSLHSMEVVNRLTTAVDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVQDLIIEVQAFCIEFSRIREAAGLFRLLKTLE 437
BLAST of mRNA_A-nodosum_M_contig102.52.3 vs. uniprot
Match: K3XBZ3_GLOUD (CCR4-NOT transcription complex subunit 11 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XBZ3_GLOUD) HSP 1 Score: 508 bits (1309), Expect = 4.120e-174 Identity = 276/453 (60.93%), Postives = 339/453 (74.83%), Query Frame = 1 Query: 1 MLETQELTPLLQLLNDEDDILENVAQKFHRIFTRNDHFKVGCALCILLCDNLLTRTQRVVSFSILCDLYRNEPNGTNPFLPFFLEAIENGTDFVEKQYLVHLLCSPPTNRNSARKTARQVIADYEATPAEAVSVPDLSALRQLYSERNPAVPSLRTAGVRPVLPDPVVG-DEEVGSWLPPR-PEDQAARGSGGGALRAGLPGKGGAAAPIQPLTLDEMCL-SDGAWGGSMSLASFEPEFMRPVPPLLPITDSEVMWINPDYAPGLLWDTSMGQDSSKGAQVRDVMVKAFNGPLLPIQQQQVLNELQADARLVYHCGLTPSKLPDLVENNPMIAIECLLKLMSSSQITEYLSALVNMDMSLHSMEVVNRLTTSVDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVEDLFIEVQAFCIEFSRIREAAGLFRLLKTLE 1350 MLET+EL PLL +LN++D LE V F + +T+NDHFKVGC +CILL DNLLT +QRVV FSIL DLYRNE GTNPFLP FLEA+E G+D EK++LV LL + P+ ++ +KTA+ VI + +P D+ R+ Y+E+ PAVP R AGVR V+ D + E + + P P ++ + LP + L+L+EM L S+G G +SL SFEP+FMR PP+L +E++W+NPDY P +LW+++M DSS G ++R++M+KAF PL+P Q +VL+EL+ + +LVY C LTP +LPDLVENNPMIAI+CLLKLMSS+QITEYLSALVNMDMSLHSMEVVNRLTT+VDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINV+DL IEVQAFCIEFSRIREAAGLFRLLKTLE Sbjct: 1 MLETRELRPLLSILNEDDKPLETVMSSFLKTYTKNDHFKVGCTICILLQDNLLTSSQRVVGFSILSDLYRNESAGTNPFLPVFLEALEKGSDISEKKFLVLLLSAAPSTKDMNKKTAKAVITELRQSPVPLQF--DIEGFRKAYAEKTPAVPQFRAAGVRNVVTDTELDLQEHLNNGASPHVPPNEVSS--------LNLP-------CFEALSLEEMSLISEGDASGPLSLLSFEPKFMRLPPPILEPDMTELIWLNPDYCPTMLWNSTM-LDSSHGMEIRELMLKAFQTPLIPSLQAKVLDELEVNPKLVYQCSLTPQRLPDLVENNPMIAIDCLLKLMSSNQITEYLSALVNMDMSLHSMEVVNRLTTAVDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVQDLIIEVQAFCIEFSRIREAAGLFRLLKTLE 435
BLAST of mRNA_A-nodosum_M_contig102.52.3 vs. uniprot
Match: H3H0V6_PHYRM (CCR4-NOT transcription complex subunit 11 n=30 Tax=Peronosporaceae TaxID=4777 RepID=H3H0V6_PHYRM) HSP 1 Score: 509 bits (1310), Expect = 5.850e-174 Identity = 280/473 (59.20%), Postives = 341/473 (72.09%), Query Frame = 1 Query: 1 MLETQELTPLLQLLNDEDDILENVAQKFHRIFTRNDHFKVGCALCILLCDNLLTRTQRVVSFSILCDLYRNEPNGTNPFLPFFLEAIENGTDFVEKQYLVHLLCSPPTNRNSARKTARQVIADYEATPAEAVSVPDLSALRQLYSERNPAVPSLRTAGVRPVLPDPVVGDEEV---GSWLPPRPEDQAARGSGGGALRAGLPGKGGAAAPIQPLTLDEMCLSDGA--------------------WGGSMSLASFEPEFMRPVPPLLPITDSEVMWINPDYAPGLLWDTSMGQDSSKGAQVRDVMVKAFNGPLLPIQQQQVLNELQADARLVYHCGLTPSKLPDLVENNPMIAIECLLKLMSSSQITEYLSALVNMDMSLHSMEVVNRLTTSVDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVEDLFIEVQAFCIEFSRIREAAGLFRLLKTLE 1350 MLE +EL PLL +LN++D LE VA F FT+NDHFKVGC +CILL DNLLT +QR+V FSIL DLYRNE TNPFLP FL+A+E G+D EK+ +VHLL + R+S++K A+Q++A++ A P++ V D+ A+R Y ER P+VP R AG+R V+ D +E G+ L P + ++ LP + L+L+EM L A GS+SL SFEP FMR PP+L +E++W+NPDY P LLWD++M DS+ G +R++M++AF PL+P QQ+VL EL+AD +LVYHC LTP +LPDLVENNPM+AI+CLLKLMSS+QITEYLSALVNMDMSLHSMEVVNRLTT+VDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINV+DL IEVQAFCIEFSRIREAAGLFRLLKTLE Sbjct: 1 MLEIRELRPLLAILNEDDKPLEQVASMFLHTFTKNDHFKVGCTICILLQDNLLTSSQRIVGFSILSDLYRNEGTTTNPFLPVFLDALEKGSDLCEKKLIVHLLTATGATRDSSKKAAKQLMAEFRANPSQPVQF-DVEAMRNSYLERTPSVPQFRAAGIRNVVTDTEFDLQEHVNNGANLQVPPNEVSS---------LNLP-------CFEALSLEEMSLLSDAEASXXXXXXXXXXXXXXXXXXAGSLSLLSFEPTFMRLPPPILEPDMTELIWLNPDYCPTLLWDSTM-LDSTHGIALRELMLRAFQKPLVPSLQQKVLAELEADPKLVYHCSLTPQRLPDLVENNPMLAIDCLLKLMSSNQITEYLSALVNMDMSLHSMEVVNRLTTAVDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVQDLIIEVQAFCIEFSRIREAAGLFRLLKTLE 455
BLAST of mRNA_A-nodosum_M_contig102.52.3 vs. uniprot
Match: A0A484EAT0_BRELC (CCR4-NOT transcription complex subunit 11 n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EAT0_BRELC) HSP 1 Score: 498 bits (1283), Expect = 6.660e-170 Identity = 279/471 (59.24%), Postives = 339/471 (71.97%), Query Frame = 1 Query: 1 MLETQELTPLLQLLNDEDDILENVAQKFHRIFTRNDHFKVGCALCILLCDNLLTRTQRVVSFSILCDLYRNEPNGTNPFLPFFLEAIENGTDFVEKQYLVHLLCSPPTNRNSARKTARQVIADYEATPAEAVSVPDLSALRQLYSERNPAVPSLRTAGVRPVLPDPVVGDEEV---GSWLPPRPEDQAARGSGGGALRAGLPGKGGAAAPIQPLTLDEMCL------SDGAWG------------GSMSLASFEPEFMRPVPPLLPITDSEVMWINPDYAPGLLWDTSMGQDSSKGAQVRDVMVKAFNGPLLPIQQQQVLNELQADARLVYHCGLTPSKLPDLVENNPMIAIECLLKLMSSSQITEYLSALVNMDMSLHSMEVVNRLTTSVDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVEDLFIEVQAFCIEFSRIREAAGLFRLLKTLE 1350 MLE +EL PLL +LN++D LE V F R FT+NDHFKVGC +CILL DNLLT +QR+VSFSILCDLYR+E TNPFL F++A+E G+D E+ ++VHLL + R+S++K+A+Q +AD+ P+ + + D+ ALRQ Y ER P VP R AG+R V+ D +E G+ L P + ++ LP + L+L+EM L S G+ G GS+SL SFEP+FMR P +L +E +W+NPDY P LLWD++M DS+ +R++M AF PL+P QQ+VL EL+AD +LVYHC LTP +LPDLVENNPM+AI CLLKLMSS+QITEYLSALVNMDMSLHSMEVVNRLTT+VDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINV+DL IEVQAFCIEFSRIREAAGLFRLLKTLE Sbjct: 1 MLEIRELRPLLAILNEDDKPLEQVTSLFLRTFTKNDHFKVGCTICILLQDNLLTSSQRIVSFSILCDLYRSEGTTTNPFLLVFVDALEKGSDLCEQNFIVHLLTTSGAPRDSSKKSAKQWMADFRTNPSPPLHI-DVEALRQNYLERTPLVPQFRAAGIRNVVTDSEFDLQEHVNNGANLQVPPNEVSS---------LNLPCS-------EALSLEEMSLLSDADVSSGSHGTASSSAASASCTGSLSLLSFEPKFMRLPPSILEPDMTEFIWLNPDYCPTLLWDSTM-LDSTHNIALRELMTCAFQKPLVPSLQQKVLAELEADPKLVYHCSLTPQRLPDLVENNPMLAINCLLKLMSSNQITEYLSALVNMDMSLHSMEVVNRLTTAVDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVQDLIIEVQAFCIEFSRIREAAGLFRLLKTLE 453
BLAST of mRNA_A-nodosum_M_contig102.52.3 vs. uniprot
Match: F0W6B0_9STRA (CCR4-NOT transcription complex subunit 11 n=2 Tax=Albugo TaxID=65356 RepID=F0W6B0_9STRA) HSP 1 Score: 481 bits (1239), Expect = 1.720e-162 Identity = 267/457 (58.42%), Postives = 324/457 (70.90%), Query Frame = 1 Query: 1 MLETQELTPLLQLLNDEDDILENVAQKFHRIFTRNDHFKVGCALCILLCDNLLTRTQRVVSFSILCDLYRNE-PNGTNPFLPFFLEAIENGTDFVEKQYLVHLLCSPPTNRNSARKTARQVIADYEATPAEAVSVPDLSALRQLYSERNPAVPSLRTAGVRPVLPDPVVGDEEV---GSWLPPRPEDQAARGSGGGALRAGLPGKGGAAAPIQPLTLDEMCLSDGAWG---GSMSLASFEPEFMRPVPPLLPITDSEVMWINPDYAPGLLWDTSMGQDSSKGAQVRDVMVKAFNGPLLPIQQQQVLNELQADARLVYHCGLTPSKLPDLVENNPMIAIECLLKLMSSSQITEYLSALVNMDMSLHSMEVVNRLTTSVDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVEDLFIEVQAFCIEFSRIREAAGLFRLLKTLE 1350 MLE +EL PLL +L++ D LE V F + +T+NDHF++GC + ILL DNLLT QR + FSIL DLYRNE + NPFLP FL A E G D EK++L HLL S ++R +K+A V+ ++ + + V D+ L+ Y ER PAVP LR +G+R V+ D + +E G+ L P + + A +P + T++E A G G +SL SFEP FMRP P +L SE++W+NPDY P +LWD +M +D+S ++RD+M KAF PL+P QQ+VL EL AD ++VYH LTP +LPDLVENNPMIAIECLLKLMSS+QITEYLSALVNMDMSLHSMEVVNRLTT+VDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINV+DL IEVQAFCIEFSRIREAAGLFRLLKTLE Sbjct: 65 MLEMRELRPLLAILSESDKPLEQVTNAFLKTYTKNDHFRIGCIVSILLQDNLLTSAQRFIGFSILFDLYRNEGSHAINPFLPIFLNAYEKGNDVYEKKFLSHLLSSA-SSRELNKKSANAVLQEFRSDTTQTVHAIDVDKLQAWYQERTPAVPQLRASGIRNVIADSELDYQEHMNNGNCLQLAPNEVSL---------ANIP-------CLDEWTMEEFSEEKDASGKTNGYLSLLSFEPPFMRPPPSVLEPEMSELIWLNPDYCPSVLWDDTMFEDASHELELRDLMSKAFLNPLIPSHQQKVLAELDADPKIVYHSALTPQRLPDLVENNPMIAIECLLKLMSSNQITEYLSALVNMDMSLHSMEVVNRLTTAVDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVQDLIIEVQAFCIEFSRIREAAGLFRLLKTLE 504
BLAST of mRNA_A-nodosum_M_contig102.52.3 vs. uniprot
Match: A0A7S2RYB1_9STRA (CCR4-NOT transcription complex subunit 11 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RYB1_9STRA) HSP 1 Score: 473 bits (1216), Expect = 7.630e-160 Identity = 265/452 (58.63%), Postives = 326/452 (72.12%), Query Frame = 1 Query: 1 MLETQELTPLLQLLNDEDDILENVAQKFHRIFTRNDHFKVGCALCILLCDNLLTRTQRVVSFSILCDLYRNEPNGT-NPFLPFFLEAIENGTDFVEKQYLVHLLCSPPTNRNSARK-TARQVIADYEATPAEAVSVPDLSALRQLYSERNPAVPSLRTAGVRPVLPDPVVGDEEVGSWLPPRPEDQAARGSGGGALRAGLPGKGGAAAPIQPLTLDEMCLSDGAWGGSMSLASFEPEFMRPVPPLLPITDSEVMWINPDYAPGLLWDTSMGQDSSKGAQVRDVMVKAFNGPLLPIQQQQVLNELQADARLVYHCGLTPSKLPDLVENNPMIAIECLLKLMSSSQITEYLSALVNMDMSLHSMEVVNRLTTSVDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVEDLFIEVQAFCIEFSRIREAAGLFRLLKTLE 1350 +L EL LL +L+ + + LE V F R F+RNDH+K+ CAL ILL D LLTRTQR++SF +L +L+ N NPFLP FL +E +D E+ ++ L+ R+S RK +AR ++ D A VP+++ LRQ + + +P+ P L +A VRPV+ DP+ +E G + P AA G+ + P AP + L+ DEM G +M L P F RP+PPLL +TD+E+MWINPDYAP LLWD+++ +D++KG +VR++M KAF GPL +QQ VLNEL+ D RLVYHCGLTP KLP+LVENNP+IAIECLLKLMSS+Q+ EYLSALVNMDMSLHSMEVVNRLTT+VDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIR KIINV+DLFIEVQAFCIEFSRIREAAGLFRLLKTLE Sbjct: 5 LLTRAELDALLTVLSVDGNPLEAVLADFQRAFSRNDHYKLCCALNILLVDQLLTRTQRIISFFVLHELFGLAGNAAVNPFLPSFLATLEGPSDTPEQPFVAGLIGPSSAYRDSVRKKSARDLLEDLVQRKAMPAEVPNVATLRQKHLDSSPSPPGLDSATVRPVVHDPL---DENGLGVVP-----AAGGAXXXXTASPSPRPEAHFAPTESLSPDEMRELLGPEAAAMGLGGLRPPFPRPMPPLLTVTDAELMWINPDYAPRLLWDSTLCRDNAKGQEVRELMSKAFKGPLKLDEQQHVLNELENDNRLVYHCGLTPQKLPELVENNPIIAIECLLKLMSSNQLNEYLSALVNMDMSLHSMEVVNRLTTAVDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRTKIINVQDLFIEVQAFCIEFSRIREAAGLFRLLKTLE 448
BLAST of mRNA_A-nodosum_M_contig102.52.3 vs. uniprot
Match: A0A836CN98_9STRA (CCR4-NOT transcription complex subunit 11 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN98_9STRA) HSP 1 Score: 466 bits (1199), Expect = 3.140e-157 Identity = 266/466 (57.08%), Postives = 325/466 (69.74%), Query Frame = 1 Query: 1 MLETQELTPLLQLLNDEDDILENVAQKFHRIFTRNDHFKVGCALCILLCDNLLTRTQRVVSFSILCDLYRNEPNGTNPFLPFFLEAIENGTDFVEKQYLVHLLCSPPTN-----RNSARKTARQVIADYEATPAEAVSVPDLSALRQLYSERNPA-----VPSLRTAGVRPVLPDPVVGDEEVGSWLPPRPEDQAARGSGGGALRAGLP---GKGGAA---APIQPLTLDEMCLSDGAWGGSMSLASFEPEFMRPVPPLLPITDSEVMWINPDYAPGLLWDTSMGQDSSKGAQVRDVMVKAFNGPLLPIQQQQVLNELQADARLVYHCGLTPSKLPDLVENNPMIAIECLLKLMSSSQITEYLSALVNMDMSLHSMEVVNRLTTSVDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVEDLFIEVQAFCIEFSRIREAAGLFRLLKTLE 1350 MLE ++L LL +L+D ++ +E VA +F R F D+F++GC++C+LL DNLLT QRV + +L ++ +G+NPF L+ E D E++ R A A V+ ++E+ +E D+++LR+ ++ER P LR AG+RPVL DP G +W G+GG A AG P GK AA AP PL + M L +G GGS+++ FEPE +RPVPPLLP+ SEVMW++P+YAP LWD S+GQDSS+GA+VR ++ +AF PL QQQQVL ELQAD+RLVY CGLTP KLP LVENNPMIA+ECL +LMSSSQITE+LSALVNMDMSLHSMEVVNRLTTSVDLPTEFIHLYISNCISSCENI+DKYMQNRLVRLVCVFLQSLIRNKIINV+ LFIEVQAFCIEFSRIREAAGLFRLLKTLE Sbjct: 1 MLEPRQLDDLLTVLSDNEEAVETVAGRFQRAFAATDYFRIGCSVCMLLADNLLTSAQRVAAIILLWSWGKDGSSGSNPFHGTLLQIAEETADARERRLXXXXXXXXXXXXXXXXRAWALLPAAAVLGEFESPQSEE-GASDVTSLRRAHAERERGGAGVRAPGLRAAGLRPVLADPCEGGR---TW-----------GTGGSAWFAGGPRGAGKRPAAGRRAPETPLPPEAMALMEGPEGGSLTMEGFEPEIIRPVPPLLPVEASEVMWLHPEYAPRFLWDASLGQDSSRGAEVRQLVGRAFKAPLPQAQQQQVLAELQADSRLVYLCGLTPQKLPALVENNPMIAVECLQRLMSSSQITEHLSALVNMDMSLHSMEVVNRLTTSVDLPTEFIHLYISNCISSCENIRDKYMQNRLVRLVCVFLQSLIRNKIINVQALFIEVQAFCIEFSRIREAAGLFRLLKTLE 451
BLAST of mRNA_A-nodosum_M_contig102.52.3 vs. uniprot
Match: A0A067CRR8_SAPPC (CCR4-NOT transcription complex subunit 11 n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CRR8_SAPPC) HSP 1 Score: 459 bits (1181), Expect = 8.590e-155 Identity = 266/458 (58.08%), Postives = 325/458 (70.96%), Query Frame = 1 Query: 1 MLETQELTPLLQLLNDEDDILENVAQKFHRIFTRNDHFKVGCALCILLCDNLLTRTQRVVSFSILCDLYRNEPNGTNPFLPFFLEAIE--NGTDFVEKQYLVHLLC--SPPTNRNSARKTARQVIADYEATPAEAVSVPDLSALRQLYSERNPAVPSLRTAGVRPVLPDPVVGDEEVGSW-LPPRPEDQAARGSGGGALRAGLPGKGGAAAPIQP-LTLDEMCLSDGAWGGSMSLASFEPEFMRPVPPLLPITDSEVMWINPDYAPGLLWDTSMGQDSSK--GAQVRDVMVKAFNGPLLPIQQQQVLNELQADARLVYHCGLTPSKLPDLVENNPMIAIECLLKLMSSSQITEYLSALVNMDMSLHSMEVVNRLTTSVDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVEDLFIEVQAFCIEFSRIREAAGLFRLLKTLE 1350 MLE +E+ PLL LL++ED +E V F R FT+NDHFKVGC +C++L DN+LT QRVV FSIL +++RNE N TNPF P +EA+E +G D EK+YL+HLL S P + S + + + + + S+ +L A +QLY +R P VP + G+R VLP + +E G++ L P D AA +P LT D++ L + +L S P F+RP P +L SE MW++PDY P LLWDT M +D+ G ++RD+M KAF GPL+P QQQ+VL +L+AD +LVY C LTP++LPDLVENNPMIAIECLLKLM+S+QITEYLSALVNMDMSLHSMEVVNRLTT+VDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINV+DL IEVQAFCIEFSRIREAAGLFRLLKTLE Sbjct: 1 MLEAREMGPLLALLSEEDKSVEVVVSMFLRSFTKNDHFKVGCMVCLMLADNVLTSNQRVVGFSILSEVFRNETN-TNPFFPSLVEALEAPHG-DPAEKRYLIHLLARMSAPGSEPSKKNLNAKQLLQHFRNETKVASL-NLDAEKQLYFDRTPRVPESLSQGIRGVLPYSALEFQEHGNYNLLLAPADIAAM-----------------TLDDEPTLTADDLNLE------TCTLQSVNPVFVRPAPTILEPEISEYMWLDPDYCPTLLWDTGMYEDADVDCGRELRDLMAKAFVGPLVPSQQQKVLADLEADPKLVYACQLTPARLPDLVENNPMIAIECLLKLMTSNQITEYLSALVNMDMSLHSMEVVNRLTTAVDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVQDLIIEVQAFCIEFSRIREAAGLFRLLKTLE 432 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig102.52.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig102.52.3 >prot_A-nodosum_M_contig102.52.3 ID=prot_A-nodosum_M_contig102.52.3|Name=mRNA_A-nodosum_M_contig102.52.3|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=451bp MLETQELTPLLQLLNDEDDILENVAQKFHRIFTRNDHFKVGCALCILLCDback to top mRNA from alignment at A-nodosum_M_contig102:248795..258004- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig102.52.3 ID=mRNA_A-nodosum_M_contig102.52.3|Name=mRNA_A-nodosum_M_contig102.52.3|organism=Ascophyllum nodosum dioecious|type=mRNA|length=9210bp|location=Sequence derived from alignment at A-nodosum_M_contig102:248795..258004- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig102:248795..258004- >mRNA_A-nodosum_M_contig102.52.3 ID=mRNA_A-nodosum_M_contig102.52.3|Name=mRNA_A-nodosum_M_contig102.52.3|organism=Ascophyllum nodosum dioecious|type=CDS|length=1353bp|location=Sequence derived from alignment at A-nodosum_M_contig102:248795..258004- (Ascophyllum nodosum dioecious)back to top |