mRNA_A-nodosum_M_contig102.46.2 (mRNA) Ascophyllum nodosum dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_A-nodosum_M_contig102.46.2 vs. uniprot
Match: A0A6H5KDE4_9PHAE (SET domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDE4_9PHAE) HSP 1 Score: 392 bits (1007), Expect = 3.580e-126 Identity = 243/512 (47.46%), Postives = 294/512 (57.42%), Query Frame = 2 Query: 386 VRLAAKLLSKKCAGLLQEDQALALERLMMHCEHLQ--------------------------ESDVFQVLKLAPTKEKSIMTD--SGERSLSVLSDCFEKHGGGPALLRLAKEELGRVSVNAINTCDEEGATGLGLFLSAAMFNHSCCPNIQAWWRGSKLELRVTKRVAPGEELCISYISIDQPSTLRRAQLRNNWFFTCHCLRCISGQWDAELVGLRCHSAGCSGAVPPPWGDVRPVCSYCGIALVDTSQG----------KECREA--VLRD----------APTPP--------------SSASTEACGELPSV--------SQRLLSAQRKFDKGVAAYMHEDPESALVLLEECLATRESILHAFNKELLRTLRYASYASVATLRWSKAYSFLARWLHPMNVMFGAAEVWDIAIMHVDIGLVLEKL-----GASNTPIPETERSKYINNNASMSRLDTSRQRAAGGMHPSALAHIEEGLRWIWICLGRDCGLPAESSALEACSKYGIVF 1690 VRL+AK+L ++C+G +QA ++RLM + Q E D QV KLA M D +G L V EK ALL LA++ELGRVS+N I TCD GATGLGLF S AM NHSC PN QAWWRGS+LE+R TK VA GEELC+SYI IDQPSTLRRAQLR++WFF C C RC+S QWDAELVGLRC + GC+GAVPPP CS CG + KE R A V D +PTPP S+ +T E+ V +RLL A R F KG+ AYM E+P+ ALV L++ L RES+LH FNKELLRTLRYASYA++AT W KAYSFL+RWLHPM+VM+GAAEVWDIA M VD GLVL+KL G P E +N + + DT AG M P+A + GLRWIW+CLGR G+ AE +ALE+ + +G+ F Sbjct: 8 VRLSAKILFRRCSGSFGLEQASKIDRLMHKHDEQQLQAAREEGCRSXXXXXXXXXXRPEQNEEDCLQVAKLAAG-----MLDRWAGAGHLIVPG---EKAVPSAALLDLARKELGRVSLNGITTCDGTGATGLGLFPSGAMINHSCSPNCQAWWRGSQLEIRCTKPVAAGEELCLSYIPIDQPSTLRRAQLRHSWFFACRCRRCVSRQWDAELVGLRCPTKGCAGAVPPPPWRSGHACSRCGTSRAFNEPSTRPAPPDEGRKESRGASVVAMDPPSCCGRGTISPTPPGEGENLDVEEGMAWSTCATRGAQEMIVVPAPDYRGCEERLLGAARDFRKGMEAYMQEEPDVALVALQKSLLVRESLLHPFNKELLRTLRYASYAAIATQSWFKAYSFLSRWLHPMDVMYGAAEVWDIAAMRVDAGLVLDKLSEVTRGPGTVPPQVGEALPGLNKLSG--QPDT-----AGSMDPAAFGEMATGLRWIWLCLGRGSGISAEIAALESFAAHGVTF 504
BLAST of mRNA_A-nodosum_M_contig102.46.2 vs. uniprot
Match: D7FJ22_ECTSI (SET domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ22_ECTSI) HSP 1 Score: 384 bits (985), Expect = 1.870e-124 Identity = 209/387 (54.01%), Postives = 247/387 (63.82%), Query Frame = 2 Query: 614 ALLRLAKEELGRVSVNAINTCDEEGATGLGLFLSAAMFNHSCCPNIQAWWRGSKLELRVTKRVAPGEELCISYISIDQPSTLRRAQLRNNWFFTCHCLRCISGQWDAELVGLRCHSAGCSGAVPPPWGDVRPVCSYCGIALVDTSQGKECREAVLRDAPTPP-----------SSASTEACGE------LPSVS-----QRLLSAQRKFDKGVAAYMHEDPESALVLLEECLATRESILHAFNKELLRTLRYASYASVATLRWSKAYSFLARWLHPMNVMFGAAEVWDIAIMHVDIGLVLEKL-----GASNTPIPETERSKYINNNASMSRLDTSRQRAAGG-MHPSALAHIEEGLRWIWICLGRDCGLPAESSALEACSKYGIVF 1690 ALL LA++ELGRVS+N I TCD G TGLGLF S AM NHSC PN QAWWRGS+LE+R TK VA GEELC+SYI IDQPST+RRAQLR++WFF C C RC+S QWDAELVGLRC + GC+GAVPPP CS+CG + PTPP ++ ST A E LP +RLL A R F KG+ AYM E+P+ ALV LE+ L R+S+LH FNKELLRTLRYASYA++AT WSKAYSFL+RWLHPM+ M+GAAEVWDIA M VD GLVL KL G P E + ++ S Q GG M P+A + GLRWIW+CLGRD GL E +ALE+ +G+ F Sbjct: 23 ALLDLARKELGRVSLNGITTCDGTGPTGLGLFPSGAMINHSCSPNCQAWWRGSQLEIRCTKPVATGEELCLSYIPIDQPSTVRRAQLRHSWFFACRCRRCVSRQWDAELVGLRCPTKGCAGAVPPPPWRGGHACSHCGTSHAFNKPSTR---------PTPPGEGENVYVEERTARSTCAAREAQEMIVLPEADYRGCEERLLGAGRNFRKGMEAYMQEEPDVALVALEKSLLVRQSLLHPFNKELLRTLRYASYAAIATHSWSKAYSFLSRWLHPMDAMYGAAEVWDIAAMRVDAGLVLNKLSEVTCGPGTVPPQVGEALPGL--------IELSGQPETGGSMDPAAFGEMAAGLRWIWVCLGRDSGLSGEIAALESFGDHGVTF 392
BLAST of mRNA_A-nodosum_M_contig102.46.2 vs. uniprot
Match: UPI001B879D65 (uncharacterized protein n=1 Tax=Suillus paluster TaxID=48578 RepID=UPI001B879D65) HSP 1 Score: 87.8 bits (216), Expect = 6.020e-15 Identity = 43/104 (41.35%), Postives = 60/104 (57.69%), Query Frame = 2 Query: 641 LGRVSVNAINTCDEEGAT---GLGLFLSAAMFNHSCCPNIQAWWRGSKLELRVTKRVAPGEELCISYISIDQPSTLRRAQLRNNWFFTCHCLRCISGQWDAELV 943 L R + NA D + G G+++ A+ FNHSCCPN++ G ++ ++ V GEELCISYI I+Q T RR +L ++WFFTC C RC S D + Sbjct: 264 LARDTGNAFGIWDGDSRDEMLGWGVWVGASYFNHSCCPNVKKTRVGRTMQFTTSRSVETGEELCISYIDINQTITQRRQELEDSWFFTCQCQRCQSEDADEACL 367
BLAST of mRNA_A-nodosum_M_contig102.46.2 vs. uniprot
Match: UPI001B86A067 (SET domain-containing protein n=1 Tax=Suillus paluster TaxID=48578 RepID=UPI001B86A067) HSP 1 Score: 87.8 bits (216), Expect = 6.090e-15 Identity = 43/104 (41.35%), Postives = 60/104 (57.69%), Query Frame = 2 Query: 641 LGRVSVNAINTCDEEGAT---GLGLFLSAAMFNHSCCPNIQAWWRGSKLELRVTKRVAPGEELCISYISIDQPSTLRRAQLRNNWFFTCHCLRCISGQWDAELV 943 L R + NA D + G G+++ A+ FNHSCCPN++ G ++ ++ V GEELCISYI I+Q T RR +L ++WFFTC C RC S D + Sbjct: 265 LARDTGNAFGIWDGDSRDEMLGWGVWVGASYFNHSCCPNVKKTRVGRTMQFTTSRSVETGEELCISYIDINQTITQRRQELEDSWFFTCQCQRCQSEDADEACL 368
BLAST of mRNA_A-nodosum_M_contig102.46.2 vs. uniprot
Match: UPI001B88E18C (histone-lysine N-methyltransferase SMYD3-like n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88E18C) HSP 1 Score: 88.2 bits (217), Expect = 9.180e-15 Identity = 43/135 (31.85%), Postives = 70/135 (51.85%), Query Frame = 2 Query: 641 LGRVSVNAINTCDEE-GATGLGLFLSAAMFNHSCCPNIQAWWRGSKLELRVTKRVAPGE--ELCISYISIDQPSTLRRAQLRNNWFFTCHCLRCISGQWDAELVGLRCHSAGCSGAVPPPWGDVRPVCSYCGIAL 1036 G++++N+ + CD E A G G++LS ++ +HSC PN A + G + +R + E ++ +SYI PST RR QL ++FTC C RC+ DA++ + C C G + D C C + + Sbjct: 155 FGKMTINSFSICDAEMQAIGTGIYLSPSLLDHSCQPNAVATFTGKTISIRAVSDIEETEPSKVFLSYIDQLAPSTDRRRQLEEQYYFTCQCCRCLDSNLDAKMQSIYCDQLNCKGLMYKMSVDTVYTCQTCKVEV 289
BLAST of mRNA_A-nodosum_M_contig102.46.2 vs. uniprot
Match: A0A1B7MSH8_9AGAM (SET domain-containing protein n=1 Tax=Rhizopogon vinicolor AM-OR11-026 TaxID=1314800 RepID=A0A1B7MSH8_9AGAM) HSP 1 Score: 86.7 bits (213), Expect = 1.440e-14 Identity = 37/81 (45.68%), Postives = 52/81 (64.20%), Query Frame = 2 Query: 677 DEEGATGLGLFLSAAMFNHSCCPNIQAWWRGSKLELRVTKRVAPGEELCISYISIDQPSTLRRAQLRNNWFFTCHCLRCIS 919 D + G G+++SA+ FNHSCCPN++ G + ++ + GEELCISYI I+Q RR +L ++WFFTC C RC S Sbjct: 278 DRDEMLGWGVWVSASYFNHSCCPNLKMTRTGRTMRFTTSRPIEAGEELCISYIDINQSMAQRRRELEDSWFFTCRCQRCQS 358
BLAST of mRNA_A-nodosum_M_contig102.46.2 vs. uniprot
Match: A0A328DWI9_9ASTE (Uncharacterized protein n=2 Tax=Cuscuta sect. Cleistogrammica TaxID=1824901 RepID=A0A328DWI9_9ASTE) HSP 1 Score: 86.3 bits (212), Expect = 4.480e-14 Identity = 49/139 (35.25%), Postives = 68/139 (48.92%), Query Frame = 2 Query: 635 EELGRVSVNAINTCDEE-GATGLGLFLSAAMFNHSCCPNIQAWWRGSKLELRVTKRVAPGEELCISYISIDQPSTLRRAQLRNNWFFTCHCLRCIS-GQWD-----AELVGLRCHSAGCSGAVPPPWGDVRPVCSYCGI 1030 E + + NA CD E G G++ +M NHSC PN + G +R + + G E+CISYI +T R+ L+ +FF+C+CLRC GQ D A L G RC GC G + D +C CG+ Sbjct: 183 ENFCKFACNAHTICDSELKPLGTGIYPVISMINHSCAPNSVLVFEGRLAVVRALQDIKKGTEVCISYIETAGSTTTRQKALKEQYFFSCNCLRCEKMGQIDDIQESAVLEGYRCKDGGCKGILLRDSEDKGFICQQCGL 321
BLAST of mRNA_A-nodosum_M_contig102.46.2 vs. uniprot
Match: S8EB52_9LAMI (Uncharacterized protein (Fragment) n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8EB52_9LAMI) HSP 1 Score: 85.5 bits (210), Expect = 7.610e-14 Identity = 52/149 (34.90%), Postives = 75/149 (50.34%), Query Frame = 2 Query: 635 EELGRVSVNAINTCD-EEGATGLGLFLSAAMFNHSCCPNIQAWWRGSKLELRVTKRVAPGEELCISYISIDQPSTLRRAQLRNNWFFTCHCLRCIS-GQWD-----AELVGLRCHSAGCSGAVPPPWGDVRPVCSYCGIALVDTSQGKE 1060 E +++ NA CD E G GL+ ++ NHSC PN + G +R +R+ G E+ ISYI + RR L++ +FFTCHC RC++ G+ D A L G RC C+G + G+ +C CG L D + KE Sbjct: 185 ENFSKLACNAHTICDCELNPLGTGLYPVVSIINHSCAPNSVLVFDGRLAVVRAMQRIPKGTEVSISYIDTAGSTVTRRKALKDQYFFTCHCSRCVNLGEADDIRESAVLEGYRCKDGICNGYLIRDSGNQGFICQSCG-RLRDEEEIKE 332
BLAST of mRNA_A-nodosum_M_contig102.46.2 vs. uniprot
Match: A0A1W0XD25_HYPDU (Putative Histone-lysine N-methyltransferase ASHR1 n=1 Tax=Hypsibius dujardini TaxID=232323 RepID=A0A1W0XD25_HYPDU) HSP 1 Score: 85.1 bits (209), Expect = 8.640e-14 Identity = 47/135 (34.81%), Postives = 73/135 (54.07%), Query Frame = 2 Query: 635 EELGRVSVNAINTCDEEGAT-GLGLFLSAAMFNHSCCPNIQAWWRGSKLELRVTKRVAPGEELCISYISIDQPSTLRRAQLRNNWFFTCHCLRCISGQWDAELVGLRCHSAGCSGAVPPPWGDVRPVCSYCGIAL 1036 E G+V N+ D++ T G+GL+L+A++F+HSC PN + G+++ +R T+ +A E+ ISYI P R+ + +FFTC C C + DAE+ LRC + C +P P CS C +L Sbjct: 174 EMFGKVKCNSYGILDDDLITCGVGLYLNASVFDHSCRPNACQIFDGARIFIRATEDIADFSEVRISYIDRFAPLKQRQDHIFEGYFFTCTCSSCSNPSKDAEMFALRCANPKCDHGIPCDQRAYLP-CSACQTSL 307
BLAST of mRNA_A-nodosum_M_contig102.46.2 vs. uniprot
Match: A0A2R6R2G7_ACTCC (Histone-lysine N-methyltransferase n=1 Tax=Actinidia chinensis var. chinensis TaxID=1590841 RepID=A0A2R6R2G7_ACTCC) HSP 1 Score: 83.6 bits (205), Expect = 2.160e-13 Identity = 48/135 (35.56%), Postives = 66/135 (48.89%), Query Frame = 2 Query: 647 RVSVNAINTCDEE-GATGLGLFLSAAMFNHSCCPNIQAWWRGSKLELRVTKRVAPGEELCISYISIDQPSTLRRAQLRNNWFFTCHCLRCISG------QWDAELVGLRCHSAGCSGAVPPPWGDVRPVCSYCGI 1030 +++ NA CD E G GL+ ++ NHSC PN + G + +R+ G E+ ISYI +T R+ LR +FF+C C RCI Q A L G RC GC+G + GD +C CGI Sbjct: 116 KLACNAHTICDSELRPLGTGLYPIISIINHSCFPNSVLVFEGRVAVICAVQRIPKGTEVLISYIETAGSTTTRQKALREQYFFSCACPRCIKEGNSDDIQESAILEGYRCKDGGCNGFLLRDSGDKGFICQQCGI 250 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig102.46.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig102.46.2 >prot_A-nodosum_M_contig102.46.2 ID=prot_A-nodosum_M_contig102.46.2|Name=mRNA_A-nodosum_M_contig102.46.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=473bp MLSCTMALKCRRKNTTQCDECHREVGYSAVPSSASLLVRLAAKLLSKKCAback to top mRNA from alignment at A-nodosum_M_contig102:195530..202991- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig102.46.2 ID=mRNA_A-nodosum_M_contig102.46.2|Name=mRNA_A-nodosum_M_contig102.46.2|organism=Ascophyllum nodosum dioecious|type=mRNA|length=7462bp|location=Sequence derived from alignment at A-nodosum_M_contig102:195530..202991- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig102:195530..202991- >mRNA_A-nodosum_M_contig102.46.2 ID=mRNA_A-nodosum_M_contig102.46.2|Name=mRNA_A-nodosum_M_contig102.46.2|organism=Ascophyllum nodosum dioecious|type=CDS|length=1419bp|location=Sequence derived from alignment at A-nodosum_M_contig102:195530..202991- (Ascophyllum nodosum dioecious)back to top |