mRNA_A-nodosum_M_contig102.31.1 (mRNA) Ascophyllum nodosum dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_A-nodosum_M_contig102.31.1 vs. uniprot
Match: A0A6H5KH57_9PHAE (Kinesin motor domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KH57_9PHAE) HSP 1 Score: 164 bits (414), Expect = 3.150e-44 Identity = 85/139 (61.15%), Postives = 104/139 (74.82%), Query Frame = 1 Query: 1 QTTPGGNPLPDNKGKTFFRFDRIFDEDSTTQEVYESVAQEIVHSVVRGLNGTIFAYGQPSSGKTFTMK--------GGEGHDAPGIMQMAARDLFDLIEHTPDRMFIVRASYIEISEESVNDLLKPNSSNLQVLCDTRR 393 QT+P GNPLPD KG TFF +DRIFDEDS+TQ VY+ VA+EIVHSV RG+NGTIFAYGQ SSGKTFTM+ GG PGI+Q+A RDLF LI+ DRMF++R SY+EI +E + DLL P ++N+QV D R+ Sbjct: 58 QTSPEGNPLPDGKG-TFFTYDRIFDEDSSTQAVYDGVAREIVHSVSRGMNGTIFAYGQTSSGKTFTMQARGDAACWGGGSEANPGIVQIATRDLFRLIQEKTDRMFLMRVSYLEIYQEEIRDLLNPENTNMQVREDPRK 195
BLAST of mRNA_A-nodosum_M_contig102.31.1 vs. uniprot
Match: A0A8J9SCD5_PHATR (Hypothetical protein (Fragment) n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9SCD5_PHATR) HSP 1 Score: 144 bits (364), Expect = 2.840e-40 Identity = 79/141 (56.03%), Postives = 100/141 (70.92%), Query Frame = 1 Query: 1 QTTPGGNPLPDN-KGKTFFRFDRIFDEDSTTQEVYESVAQEIVHSVVRGLNGTIFAYGQPSSGKTFTMKGG-------EGHDAPGIMQMAARDLFDLIEHTPDRMFIVRASYIEISEESVNDLLK--PNSSNLQVLCDTRR 393 QTTP G PLP+ G+TFF FD+ F E STTQ+VY+ VA+ IV+SVV GLNGTIFAYGQ SSGKTFTM+G G G++ MAA+D+F+ IE++PDR+F+VRAS++EI E V DLL P++ L V D RR Sbjct: 30 QTTPDGKPLPERVTGRTFFTFDKAFSESSTTQQVYDDVAKNIVNSVVTGLNGTIFAYGQTSSGKTFTMQGSGTIQEGSNGSGGGGVVHMAAQDIFNRIENSPDRIFLVRASFLEIYNEEVRDLLADDPHTRTLAVREDPRR 170
BLAST of mRNA_A-nodosum_M_contig102.31.1 vs. uniprot
Match: B7G7S2_PHATC (Kinesin-like protein (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G7S2_PHATC) HSP 1 Score: 144 bits (364), Expect = 2.440e-39 Identity = 79/141 (56.03%), Postives = 100/141 (70.92%), Query Frame = 1 Query: 1 QTTPGGNPLPDN-KGKTFFRFDRIFDEDSTTQEVYESVAQEIVHSVVRGLNGTIFAYGQPSSGKTFTMKGG-------EGHDAPGIMQMAARDLFDLIEHTPDRMFIVRASYIEISEESVNDLLK--PNSSNLQVLCDTRR 393 QTTP G PLP+ G+TFF FD+ F E STTQ+VY+ VA+ IV+SVV GLNGTIFAYGQ SSGKTFTM+G G G++ MAA+D+F+ IE++PDR+F+VRAS++EI E V DLL P++ L V D RR Sbjct: 30 QTTPDGKPLPERVTGRTFFTFDKAFSESSTTQQVYDDVAKNIVNSVVTGLNGTIFAYGQTSSGKTFTMQGSGTIQEGSNGSGGGGVVHMAAQDIFNRIENSPDRIFLVRASFLEIYNEEVRDLLADDPHTRTLAVREDPRR 170
BLAST of mRNA_A-nodosum_M_contig102.31.1 vs. uniprot
Match: A0A835YW03_9STRA (Kinesin-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW03_9STRA) HSP 1 Score: 142 bits (358), Expect = 1.740e-38 Identity = 71/131 (54.20%), Postives = 90/131 (68.70%), Query Frame = 1 Query: 1 QTTPGGNPLPDNKGKTFFRFDRIFDEDSTTQEVYESVAQEIVHSVVRGLNGTIFAYGQPSSGKTFTMKGGEGHDAPGIMQMAARDLFDLIEHTPDRMFIVRASYIEISEESVNDLLKPNSSNLQVLCDTRR 393 QT+ G PLPD KG TFF +DRIFDE + EVY A+++V SVVRGLNGTIFAYGQ SSGKTFTM+G G + GI A D+F +I +T R F++R SY+EI E + DLL P++ LQ+ D R+ Sbjct: 43 QTSLSGQPLPDAKGSTFFTYDRIFDEGCSNDEVYAGAARDLVQSVVRGLNGTIFAYGQTSSGKTFTMQGARGGEVQGIAHKATADIFAVIGNTAQRDFLLRVSYLEIYNEEIRDLLNPDTPKLQLREDPRK 173
BLAST of mRNA_A-nodosum_M_contig102.31.1 vs. uniprot
Match: A0A7S3Q0F6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q0F6_9STRA) HSP 1 Score: 130 bits (327), Expect = 1.140e-35 Identity = 71/134 (52.99%), Postives = 90/134 (67.16%), Query Frame = 1 Query: 1 QTTPGGNPLPDN-KGKTFFRFDRIFDEDSTTQEVYESVAQEIVHSVVRGLNGTIFAYGQPSSGKTFTMKGGE-------GHDAPGIMQMAARDLFDLIEHTPDRMFIVRASYIEISEESVNDLLKPNSSNLQVL 378 QTT G PLP+ G+TFF FD+ F E +TT+EVY +AQ IV SVV GLNGTIFAYGQ SSGKT TM+G G + G++ MAARD+F I + P+R+F++R S+IEI E V DLL + N +VL Sbjct: 45 QTTNEGKPLPERITGRTFFTFDKTFGEKTTTREVYSDIAQGIVESVVNGLNGTIFAYGQTSSGKTHTMQGSGTIEAGSVGDNGAGVVHMAARDIFSQINNDPERVFLLRVSFIEIYNEEVRDLLVSGNGNDKVL 178
BLAST of mRNA_A-nodosum_M_contig102.31.1 vs. uniprot
Match: A0A7S2UFQ7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UFQ7_9STRA) HSP 1 Score: 126 bits (316), Expect = 2.670e-34 Identity = 66/123 (53.66%), Postives = 85/123 (69.11%), Query Frame = 1 Query: 1 QTTPGGNPLPDNK-GKTFFRFDRIFDEDSTTQEVYESVAQEIVHSVVRGLNGTIFAYGQPSSGKTFTMKG------GEGHDAPGIMQMAARDLFDLIEHTPDRMFIVRASYIEISEESVNDLL 348 Q+TP G PLP+ G+ FF FDR+F EDS++++VY+++AQ IV SVV GLNGTIFAYGQ SSGKT+TM+G G G++ MAA D+F I P R F++R S+IEI E V DLL Sbjct: 10 QSTPDGKPLPERATGRNFFTFDRVFGEDSSSKQVYDNIAQGIVKSVVTGLNGTIFAYGQTSSGKTYTMQGAGSIQEGSNGGGGGVVHMAAHDIFSHIASDPSRDFLIRVSFIEIYNEEVRDLL 132
BLAST of mRNA_A-nodosum_M_contig102.31.1 vs. uniprot
Match: A0A7S4KCC0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4KCC0_9STRA) HSP 1 Score: 124 bits (312), Expect = 7.620e-34 Identity = 68/124 (54.84%), Postives = 83/124 (66.94%), Query Frame = 1 Query: 1 QTTPGGNPLPDN-KGKTFFRFDRIFDEDSTTQEVYESVAQEIVHSVVRGLNGTIFAYGQPSSGKTFTMKG-------GEGHDAPGIMQMAARDLFDLIEHTPDRMFIVRASYIEISEESVNDLL 348 QTT G PLP+ G++FF FD+ + E STT VY+ VA+ IV SVV GLNGTIFAYGQ SSGKT+TM+G G G++ MAARD+F I TPDR F++R S+IEI E V DLL Sbjct: 18 QTTSSGQPLPERVNGRSFFTFDQTYSEKSTTVHVYDGVAKGIVQSVVGGLNGTIFAYGQTSSGKTYTMQGSGTIQDGGSSGATGGVVHMAARDIFSHISTTPDRAFLLRVSFIEIYNEEVRDLL 141
BLAST of mRNA_A-nodosum_M_contig102.31.1 vs. uniprot
Match: W7TRS8_9STRA (Kinesin motor domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TRS8_9STRA) HSP 1 Score: 133 bits (335), Expect = 1.370e-33 Identity = 65/131 (49.62%), Postives = 92/131 (70.23%), Query Frame = 1 Query: 4 TTPGGNPLPDNK-GKTFFRFDRIFDEDSTTQEVYESVAQEIVHSVVRGLNGTIFAYGQPSSGKTFTMKGGEGHDAPGIMQMAARDLFDLIEHTPDRMFIVRASYIEISEESVNDLLKPNSSNLQVLCDTRR 393 T P GNPLPD G +FF +D++F E+S+T +VY ++ + IV SV++G NGTIFAYGQ SSGKT+TM G E G++ +AARD+F LI T DR F++R S++EI E++ DLL P + +L + D R+ Sbjct: 49 TGPDGNPLPDRSPGLSFFTYDKVFSENSSTSDVYHAIGRPIVSSVLQGFNGTIFAYGQTSSGKTYTMVGDETGGEEGVLHLAARDIFRLISETNDRDFLLRVSFVEIYNENIRDLLDPETPSLSIREDPRK 179
BLAST of mRNA_A-nodosum_M_contig102.31.1 vs. uniprot
Match: A0A1Z5JZV7_FISSO (Centromeric protein E n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JZV7_FISSO) HSP 1 Score: 126 bits (316), Expect = 4.960e-31 Identity = 66/138 (47.83%), Postives = 93/138 (67.39%), Query Frame = 1 Query: 1 QTTPGGNPLPDN-KGKTFFRFDRIFDEDSTTQEVYESVAQEIVHSVVRGLNGTIFAYGQPSSGKTFTMKG------GEGHDAPGIMQMAARDLFDLIEHTPDRMFIVRASYIEISEESVNDLLKPNSSNLQVLCDTRR 393 Q TP G PL + G+TFF +D+ F E +TT++VY ++A+EIV S + G+NGT+FAYGQ SSGKTFTM+G G + GI+ MAA D+F I + P+R+F+VRAS++EI E V DLL ++ + + D RR Sbjct: 84 QMTPDGQPLSERVTGRTFFTYDKAFPETATTRDVYNAMAKEIVESAITGVNGTVFAYGQTSSGKTFTMQGCGTIEEGLNGNGGGIVHMAAADIFQNIANQPNRVFLVRASFLEIYNEDVRDLLSSDNKTIPIREDPRR 221
BLAST of mRNA_A-nodosum_M_contig102.31.1 vs. uniprot
Match: A0A7S1B5C0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B5C0_9STRA) HSP 1 Score: 117 bits (292), Expect = 5.760e-31 Identity = 63/128 (49.22%), Postives = 84/128 (65.62%), Query Frame = 1 Query: 1 QTTPGGNPLPDNK---GKTFFRFDRIFDEDSTTQEVYESVAQEIVHSVVRGLNGTIFAYGQPSSGKTFTMKGGEGHDAP----GIMQMAARDLFDLIEHTPDRMFIVRASYIEISEESVNDLLKPNSS 363 QT G PLP+ + G+ F FDRIF E+ TT+EVY+ IV S + G+NGTIFAYGQ SSGKT+TM+G G A GI+QMAA ++F + ++ DR+F+ +AS++EI E V DLL P S Sbjct: 8 QTKLTGKPLPEKEKVSGRNLFTFDRIFGENCTTREVYDEAVDGIVRSAMNGINGTIFAYGQTSSGKTYTMQGELGGSAKTEREGIIQMAAAEIFSIRSNSTDRIFLTKASFVEIYNEEVYDLLVPGKS 135 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig102.31.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig102.31.1 >prot_A-nodosum_M_contig102.31.1 ID=prot_A-nodosum_M_contig102.31.1|Name=mRNA_A-nodosum_M_contig102.31.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=133bp QTTPGGNPLPDNKGKTFFRFDRIFDEDSTTQEVYESVAQEIVHSVVRGLNback to top mRNA from alignment at A-nodosum_M_contig102:159057..159455+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig102.31.1 ID=mRNA_A-nodosum_M_contig102.31.1|Name=mRNA_A-nodosum_M_contig102.31.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=399bp|location=Sequence derived from alignment at A-nodosum_M_contig102:159057..159455+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig102:159057..159455+ >mRNA_A-nodosum_M_contig102.31.1 ID=mRNA_A-nodosum_M_contig102.31.1|Name=mRNA_A-nodosum_M_contig102.31.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=399bp|location=Sequence derived from alignment at A-nodosum_M_contig102:159057..159455+ (Ascophyllum nodosum dioecious)back to top |