|
|
Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 1 |
| Model size | 176 |
| Hectar predicted targeting category | no signal peptide or anchor |
| Exons | 2 |
| Cds size | 174 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680866380.0376818-CDS-A-nodosum_M_contig102:148067..148144 | 1680866380.0376818-CDS-A-nodosum_M_contig102:148067..148144 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig102 148068..148144 - |
| 1680866380.0459692-CDS-A-nodosum_M_contig102:148928..149025 | 1680866380.0459692-CDS-A-nodosum_M_contig102:148928..149025 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig102 148929..149025 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig102.27.1 >prot_A-nodosum_M_contig102.27.1 ID=prot_A-nodosum_M_contig102.27.1|Name=mRNA_A-nodosum_M_contig102.27.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=58bp
MQVDRARRVHGRPGVRLVVHILVHLEQMLRDHGVFPNSSIGKARRDINVT
SGLISPDQ back to topmRNA from alignment at A-nodosum_M_contig102:148068..149025- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_A-nodosum_M_contig102.27.1 ID=mRNA_A-nodosum_M_contig102.27.1|Name=mRNA_A-nodosum_M_contig102.27.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=958bp|location=Sequence derived from alignment at A-nodosum_M_contig102:148068..149025- (Ascophyllum nodosum dioecious)
ATGCAGGTTGATCGCGCTCGGCGTGTCCATGGGCGACCGGGTGTCAGGCT
GGTGGTTCATATACTTGTTCACCTGGAGCAGATGCTGCGCGATCATGGTG
AGGTACTATTAAAATAGTCGCCCGAGTGGTCTAGTAGTTAACCTGCACAC
CTGCTAGTGCGGAAGTCGTGAGTTCGATTCTTACCAAAGTAGGATTTGTG
TTCTTTCTTTCGTAACGGAAAGCGTGGGAACGTGAGTCAGTAAAATTGTA
AGGCGTGAACCGGGGAGAGATTGGAAGATCCTTTGTGACCACAGGCAGGA
TGGTAATGATGAGGTCCATCGGCTATAAGTGAGATGAAAGAAAAAGAAGA
AGAAAAAAAGTCCCAAACTTCGTCAAGTCAAGGAGCTTTCCGCGTGGGTC
TACGATCGGGAGTGATGTAGCCCGCCCTGTTACCAAATATATTTGCATCC
TCTAAATATGCGGGTGCATTAACGCGTACTGCGCCGTGATTTTTGTTTCC
ATCTGCTGAATGGAGTGCGCTCAACCTCTTTTGTTTCATGTCGGCGCCAC
ATCATCAGTCTGTACAAGGCTATTATAATAAAATGCTGTTATGTTGCGTG
TTCACATGGTCGTTGCCAAGTTGAGCTCACACGTTTTCCACGCGTAAGGT
ATGTGTTCTTCTTCAGCCACTTTAAAGCCTGGGGCTCACACGTGATAGCT
GGTCTTTGAACTATAATAGGCCATCTTATGGTACGACGCTCCGCGGGCGT
GTAGAAATTGGCGACAATCGGAGATAAAGCAACAATTCAAAATAGCGCGC
GGTAAATCGTGTTCATGGCAACATGGTAAACGCTCAAAGGTTGAAAACCC
CATTTACTTTGCCTGCTGTCGTCCCTTCAAGGTGTTTTTCCAAACTCTAG
CATCGGGAAGGCGAGACGAGACATCAACGTCACAAGCGGTCTAATAAGTC
CGGATCAG back to topCoding sequence (CDS) from alignment at A-nodosum_M_contig102:148068..149025- >mRNA_A-nodosum_M_contig102.27.1 ID=mRNA_A-nodosum_M_contig102.27.1|Name=mRNA_A-nodosum_M_contig102.27.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=174bp|location=Sequence derived from alignment at A-nodosum_M_contig102:148068..149025- (Ascophyllum nodosum dioecious)
ATGCAGGTTGATCGCGCTCGGCGTGTCCATGGGCGACCGGGTGTCAGGCT
GGTGGTTCATATACTTGTTCACCTGGAGCAGATGCTGCGCGATCATGGTG
TTTTTCCAAACTCTAGCATCGGGAAGGCGAGACGAGACATCAACGTCACA
AGCGGTCTAATAAGTCCGGATCAG back to top
|