Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 201 |
| Hectar predicted targeting category | no signal peptide or anchor |
| Exons | 2 |
| Cds size | 117 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680866367.9755886-UTR-A-nodosum_M_contig101:901254..901277 | 1680866367.9755886-UTR-A-nodosum_M_contig101:901254..901277 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig101 901255..901277 + |
| 1680866368.0086796-UTR-A-nodosum_M_contig101:903215..903276 | 1680866368.0086796-UTR-A-nodosum_M_contig101:903215..903276 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig101 903216..903276 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680866367.9860451-CDS-A-nodosum_M_contig101:901277..901328 | 1680866367.9860451-CDS-A-nodosum_M_contig101:901277..901328 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig101 901278..901328 + |
| 1680866367.998977-CDS-A-nodosum_M_contig101:903149..903215 | 1680866367.998977-CDS-A-nodosum_M_contig101:903149..903215 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig101 903150..903215 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig101.52.1 >prot_A-nodosum_M_contig101.52.1 ID=prot_A-nodosum_M_contig101.52.1|Name=mRNA_A-nodosum_M_contig101.52.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=39bp
MTPHFLIWSLGPKAGSVFEELVKRKKYLVLRVCPTLVQ* back to topmRNA from alignment at A-nodosum_M_contig101:901255..903276+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_A-nodosum_M_contig101.52.1 ID=mRNA_A-nodosum_M_contig101.52.1|Name=mRNA_A-nodosum_M_contig101.52.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=2022bp|location=Sequence derived from alignment at A-nodosum_M_contig101:901255..903276+ (Ascophyllum nodosum dioecious)
TGACTCTGAGGCGTGACTGTCTTATGACACCGCATTTCCTAATATGGTCG
TTAGGACCCAAAGCAGGATCTGTCGACGGAATGTGTCATCAAACAGATTC
TATGAACAGATTCTATCTGGACGTTAAGACAGGGCCTAACGAGAATGGAA
CCATAAAACTCCCCCGGTATGTAAATATTCACCTCCGAAATGTCCGTATC
AGACAAAAACGTTTTTGGACCATGTTTTTCTGTCTTGTAAAAGTTGCCGT
ATAGAGTCAGTAAAAATTGCTACTCGTAGAAGGCATCAGGGATCCTGCGG
CCATAACAGACTGGCGTGATTCACCCAGATTACAATCCCGCAGGGTATGG
CTCCGTCCTCGCGATCGCGGTAAATCTGCCTGCGCAGGCAGAATTTGAGA
ACCTGCCTGCATAAATAGAACCAGAAAAGCAGAGCAACTTTCTCTGGAAA
CCTACCATTTTTTAATCCAGCACGTGGATATATCTGGACGGCGGTGCAGG
GTATGGCTTCCATCGAAAAAGCGAGTAGTTTCTGTGGTCACGGAATCCCT
TCGTTTGTGTTTCAACACCGGTTGGCCAATCCGACCCTAACGCTATCCCT
GACGCTAACCCAGACCCCCTTTCCTCAGCTGACCGCGAGGTCCCAGTTCA
TGGCTGGCGCTTGGTCATAGAACCCTGTGGGCTGGTTTTGTCCCTCCGTC
TGTGTTTCAGTTCAGGGTGGCAAACCCGACCCTACCGCCATCGTTAACGC
TAACCCAGAACTACTCCAGATGGCCGCGAGGTCCCAATTCATGGCTGGCG
CTTGATCATAGCACCCAGAGGGTTGGTTTTGTATGCGTGCCGCACGCGCG
CTGCTGTATGTGTGTGGTGCTGGATTAAACAATGGTGAGTTTTCACAGCA
AACCGCTCTGCTTTTCTGGATCTTTTTATGCAGGCAGGTTCTTAAATTCT
GTCTGCGCAGGCAGATAAACGCCGTCTGCCGTTCTCGTTCAGGCTGTCGC
TGTTGATTTTAAATGGTGTCAAAACTCTCTAAATGGTAGTCATGAGAAAT
CCGGGGCTTTTTGGGACTTATACGGGTGTGCTTGGAATGTGGATAAAGTA
AAAACGAACACACAATGTTTGTTGAGAGAGCTTGAACGAGGTAGGTTGGT
ACGGGGGAATATAACGCTGAATCTCCTGCGTATGACGACTGAAGACAACT
CCTGTACTCCAATGACCGTTTCGATATCTATCCGCAGATGTAACGATTTT
ACATGCAAACTCACATCCTCCCTGCTTTTCGAATCGTAAACATTGCAACT
TCACTAATATCAAAGTCATGCCCTCCCTGCTTTTTTGACGCAGCTCCCAA
AGCTGCAAATCATTCAAAAACTGATGTACTGTTCTGTCTTCGCTGTTTTT
CTGGTGTCCCTGCATGGCGGTTAAGGGCCTGTATTAACGTCTTGATAGAA
TCTGTTCATAAAATCTATCGACAGAATCTGTCGAAAATAAAGCTCTGTGA
TTGGCCAAATAAGCTCGACGCTACTAGTTGGCAAGTTCTGAACACGACAG
AATCTGTCGGAATGGACAGATTCTAATAATTGTTTTGGCATTTATTTTTT
GCTGTCAGTAAGCTGAATCTGTCGGGCGGACCCCAAAACATCAGAAGAAA
AGACACAAGCTGCTACATGCTGGAAACAGTACAACTGAAACCGATAAAAA
AAAAGAAACAGTATAACTGATACCCCGAGTAGTTGATTTTCTTGTGTACT
TCTTTAAGTACGCGCCGCTAACGCTGGGTCTGGACAACAGCAGTTGCGAG
CCCGACGAGTACACCGACTTTGATGTATTCTAGACGCCCCCAAACAACGC
GCGAGGTACCATGCACTACACGAGGTGTTGGGCTTTCATATATCGTTTGA
GGAGCTTGTGAAACGCAAAAAATATCTGGTGCTCCGTGTATGTCCTACTT
TGGTACAGTAAGTAGTTTGTTGCAGTCTGTTGACAGTCGTCACGGTTTAT
GGGGAGGCTTGACTGTCGGCTT back to topCoding sequence (CDS) from alignment at A-nodosum_M_contig101:901255..903276+ >mRNA_A-nodosum_M_contig101.52.1 ID=mRNA_A-nodosum_M_contig101.52.1|Name=mRNA_A-nodosum_M_contig101.52.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=117bp|location=Sequence derived from alignment at A-nodosum_M_contig101:901255..903276+ (Ascophyllum nodosum dioecious)
ATGACACCGCATTTCCTAATATGGTCGTTAGGACCCAAAGCAGGATCTGT
CTTTGAGGAGCTTGTGAAACGCAAAAAATATCTGGTGCTCCGTGTATGTC
CTACTTTGGTACAGTAA back to top
|