mRNA_A-nodosum_M_contig1009.3.2 (mRNA) Ascophyllum nodosum dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_A-nodosum_M_contig1009.3.2 vs. uniprot
Match: D8LJZ5_ECTSI (ND11 homolog, NADH dehydrogenase (Ubiquinone) subunit 11 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJZ5_ECTSI) HSP 1 Score: 886 bits (2290), Expect = 8.830e-316 Identity = 458/596 (76.85%), Postives = 504/596 (84.56%), Query Frame = 1 Query: 1 SVAMLARKGVATRVAAAVTR--------SVIEGFGC--EGKRCAMSYAAFASSPXXXXXXXXXXXRGDRREGQEELER--GDHPMPGILRVKKKSLEITPVGALTSKPYAFQARPWELRHAESIDVSDGVGSNIRVDFKETEVMRVLPRENEEINSEWIHDKARFSYDGLKRQRLDRPYTMLMGDDGAPSLAPVTWKQGFEAVADMVDRPTAFVVGRGMDLETAVAVKDLALRMGNAAVYKEGGIAGEDYPNHLKLKDVDDADLILHVGLNARLEATMLNVRIRQRWLRGGLTVGTIGAPVRLTYDHQNLGLTPTSLIDLANGNHPFCEALAAAEKPLILYGSAVLERDDAASIVALLKSLNTQTKASKKKSHSASIFFRCIAGEAKDCVHLVSSHSNDVGLTALHLDPLPKGPDRDDVAETFYLVDLADSSLAAELKEAGKSVVYQGTHGDEHLSNVDVILPGATFVEKEGVYVNTEGRPQRSAMVFPPPGIAREDWKIVRALGEFVGVTLPYSDEEEMEERVRTLVPLTMNMDELSHSQMGPIQDVPTGEVQVHETTIGPLIHDFYRTDAVSRASVTMAKTSALHRESANTWEF 1752 S+AM++R G + R AA TR S F C R ++SY+AFA++ +R+G E+ER G G+LRV++ S++I PVGALTSKPYAFQARPWELRHAESIDVSDGVGSNIRVD+KETEVMRVLPRENEEINSEWIHDKARFSYDGLKRQRLDRPY LMGDDG+ SLAPVTWKQG EAVA +VDRPTAFVVGRG+DLETAVAVKDLALRMGNAAVYKEGGI ED+PNHLKL DVDDADLILHVGLNARLEATMLNVRIRQRWLRGGLTVGTIGAPVRLTYD +NLGLTP SL++LA G HPFC+ALAAAEKPLILYGSAVLERDD+ASI+ LLKSLN QTK AGE++DCVHLVSSH+NDVGLTALHLDPLP+GP R DVAETFYLVDLADS+LAAELKEAGK+VVYQGTHGDE+L VD +LPGATFVEKEG YVNTEGRPQRSA VFPPPGIAREDWKIVRALGEFVGVTLPYSD+EEMEERV+TLVPLT+NMDELSHSQ+GPI P GE++VHETT+GPL+HDFYRTDAVSRASVTMAKTSALHRE+A+TWEF Sbjct: 4 SIAMISRVGGSARATAAATRACGAVAGSSSSSSFSCAISAPRASLSYSAFATTNNALPA---------KRQGGGEVEREAGAASKGGVLRVQENSIDIAPVGALTSKPYAFQARPWELRHAESIDVSDGVGSNIRVDYKETEVMRVLPRENEEINSEWIHDKARFSYDGLKRQRLDRPYATLMGDDGSASLAPVTWKQGLEAVAGLVDRPTAFVVGRGVDLETAVAVKDLALRMGNAAVYKEGGIEAEDHPNHLKLADVDDADLILHVGLNARLEATMLNVRIRQRWLRGGLTVGTIGAPVRLTYDAENLGLTPASLVELAEGKHPFCKALAAAEKPLILYGSAVLERDDSASIMKLLKSLNAQTK----------------AGESQDCVHLVSSHANDVGLTALHLDPLPRGPARADVAETFYLVDLADSALAAELKEAGKAVVYQGTHGDENLGEVDALLPGATFVEKEGTYVNTEGRPQRSAFVFPPPGIAREDWKIVRALGEFVGVTLPYSDDEEMEERVQTLVPLTLNMDELSHSQVGPIPGPPKGEIRVHETTLGPLVHDFYRTDAVSRASVTMAKTSALHRETASTWEF 574
BLAST of mRNA_A-nodosum_M_contig1009.3.2 vs. uniprot
Match: A0A4W3IQW7_CALMI (NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial n=8 Tax=Callorhinchus milii TaxID=7868 RepID=A0A4W3IQW7_CALMI) HSP 1 Score: 333 bits (854), Expect = 2.150e-98 Identity = 200/518 (38.61%), Postives = 292/518 (56.37%), Query Frame = 1 Query: 250 LEITPVGALTSKPYAFQARPWELRHAESIDVSDGVGSNIRVDFKETEVMRVLPRENEEINSEWIHDKARFSYDGLKRQRLDRPYTMLMGDDGAPSLAPVTWKQGFEAVADMVD----RPTAFVVGRGMDLETAVAVKDLALRMGNAAVYKE--------GGIAGEDYPNHLKLKDVDDADLILHVGLNARLEATMLNVRIRQRWLRGGLTVGTIGAPVRLTYDHQNLGLTPTSLIDLANGNHPFCEALAAAEKPLILYGSAVLERDDAASIVALLKSLNTQTKASKKKSHSASIFFRCIAGEAKDCVHLVSSHSNDVGLTALHLDPLPKGPDRDDVAETFYLVDLADSSLAAELKEAGKSVVYQGTHGDEHLSNVDVILPGATFVEKEGVYVNTEGRPQRSAMVFPPPGIAREDWKIVRALGEFVGVTLPYSDEEEMEERVRTLVPLTMNMDELSHS----QMGPIQDVPTGEVQVHETTIGP--LIHDFYRTDAVSRASVTMAKTSALHRESANTWE 1749 +++ PVGALTSKPYAF +RPWE R ESIDV D +GSN+ V + EVMR+LPR NE++N EWI DK RFSYDGLKRQRL P M+ +G L P +W++ F +A ++ + A + G D E VA+KDL R+ + ++ E G +Y + K+ V++AD++L VG N R EA + NVRIR+ WL L V +GA V LTY + +LG +P L ++A+GNHPF + L+ A+KP+++ GS++L+R D A+I A ++ + S + + + + A L D+G A +D + K P + +L+ + + + G ++YQG HGD DVILPGA + EK YVNTEGR Q++ + PPGIAREDW+I+RA+ E GVTLPY +E+ +R+ + P ++ D + + Q + + ++ + E + P I DFY TD +SRAS TMAK E A E Sbjct: 229 IDLCPVGALTSKPYAFTSRPWETRKTESIDVMDAIGSNVVVSTRTGEVMRILPRLNEDVNEEWISDKTRFSYDGLKRQRLTVP--MVRNSEG--QLVPTSWEEAFIQIAGVLQGVQSKDVAAIAGGMADAEALVALKDLMNRLNSDSLCTEEIFPMAGAGTDLRSNYLLNTKIAGVEEADVLLLVGTNPRFEAPLFNVRIRKSWLHNDLRVALVGANVDLTYTYDHLGDSPQVLQEIASGNHPFSQVLSEAKKPMVVVGSSILQRKDGATIHAAASTIAQNVRVSSQVGNDWKVL-NVLQRMASQVAAL------DLGYKA-GVDAIRKNPPK-----VLFLLGADNHCVTRQDLPKGCFIIYQGHHGDVGAPMADVILPGAAYTEKTATYVNTEGRAQQTQLAVTPPGIAREDWQIIRAVSEVAGVTLPYDTLDEVRKRLAEVSPNLISYDNIEEANFFKQANELAKLVNQQL-LSEPLVPPQLTIKDFYMTDPISRASQTMAKCVKAVTEGAKAIE 728
BLAST of mRNA_A-nodosum_M_contig1009.3.2 vs. uniprot
Match: A0A210PQI0_MIZYE (NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial n=2 Tax=Pectinidae TaxID=6566 RepID=A0A210PQI0_MIZYE) HSP 1 Score: 332 bits (851), Expect = 4.930e-98 Identity = 196/517 (37.91%), Postives = 293/517 (56.67%), Query Frame = 1 Query: 250 LEITPVGALTSKPYAFQARPWELRHAESIDVSDGVGSNIRVDFKETEVMRVLPRENEEINSEWIHDKARFSYDGLKRQRLDRPYTMLMGDDGAPSLAPVTWKQGFEAVADMVD----RPTAFVVGRGMDLETAVAVKDLALRMGNAAVYKE----GGIAGED----YPNHLKLKDVDDADLILHVGLNARLEATMLNVRIRQRWLRGGLTVGTIGAPVRLTYDHQNLGLTPTSLIDLANGNHPFCEALAAAEKPLILYGSAVLERDDAASIVALLKSLNTQTKASKKKSHSASIF--FRCIAGEAKDCVHLVSSHSNDVGLTALHLDPLPKGPDRDDVAETFYLVDLADSSLAAELKEAGKSVVYQGTHGDEHLSNVDVILPGATFVEKEGVYVNTEGRPQRSAMVFPPPGIAREDWKIVRALGEFVGVTLPYSDEEEMEERVRTLVPLTMNMDELSHS----QMGPIQDVPTGEVQVHETTIGP---LIHDFYRTDAVSRASVTMAKTSALHRESA 1737 +++ PVGALTSKPYAF ARPWE R ES+DV D +GSNI + + EVMR+LPR NEEIN EWI D RF+YDGLKRQRL P+ D + +L +W+ F A A+ + A + G MD E VA KD +MG+ + E G AG D Y + K+ V++AD++L VG N R EA +LN R+R+ W+ L V +G+ V LTYD+++LG + L ++ANG+HPFC+ L A++P+++ GS+ L+R D+ +I A + ++ +A+ + + + +AG+ + D+G A +D + + P + YL+ + ++ E V+YQG HGD + DV+ PGA + EK+G YVNTEGR Q++ M PPG+AR DWKI+RAL E VG LPY E+++ R+ + P + + + Q + + G Q+ + P ++ DFY T+++SRAS TMAK +E+A Sbjct: 227 IDLCPVGALTSKPYAFTARPWETRKVESVDVMDALGSNIVISTRTNEVMRILPRMNEEINEEWISDTTRFAYDGLKRQRLTSPFVK----DESGNLVATSWEDAFIATAEKLSAVKGEDVAGIAGGLMDAEALVAFKDFLNKMGSEGLCTEEIFPGDGAGTDLRSNYLLNTKIAGVEEADIVLLVGTNPRFEAPLLNARMRKSWIHNDLKVAMVGSQVDLTYDYEHLGDSTQVLQEIANGSHPFCKELNKAKRPMVVVGSSALQRSDSGAIHAAVSLISQSVRANSSCDDNWKVLNVLQRVAGQVA---------ALDLGFKA-GVDHIRQNPPK-----VLYLLGADEGAITQEDLPKDCFVIYQGHHGDIGAAMADVVFPGAAYTEKDGTYVNTEGRAQQTRMAVTPPGLARNDWKIIRALSEIVGSPLPYDKLEDVQGRLCEVSPNLIKYGDAEEANYFKQAQELAQLTKG--QLDNAPLQPDISILSDFYMTNSISRASPTMAKCVTATKEAA 722
BLAST of mRNA_A-nodosum_M_contig1009.3.2 vs. uniprot
Match: A0A4R3JH71_9PROT (NADH-quinone oxidoreductase n=1 Tax=Varunaivibrio sulfuroxidans TaxID=1773489 RepID=A0A4R3JH71_9PROT) HSP 1 Score: 331 bits (848), Expect = 5.240e-98 Identity = 209/521 (40.12%), Postives = 289/521 (55.47%), Query Frame = 1 Query: 202 RGDHPMPGILRVKKKSLEIT-------PVGALTSKPYAFQARPWELRHAESIDVSDGVGSNIRVDFKETEVMRVLPRENEEINSEWIHDKARFSYDGLKRQRLDRPYTMLMGDDGAPSLAPVTWKQGFEA----VADMVDRPTAFVVGRGMDLETAVAVKDLALRMGNAAVYKEGGIAGEDYPN------HLKLKDVDDADLILHVGLNARLEATMLNVRIRQRWLRGGLTVGTIGAPVRLTYDHQNLGLTPTSLIDLANGNHPFCEALAAAEKPLILYGSAVLERDDAASIVALLKSLNTQTKASKKKSHSASIFFRCIAGEAKDCVHLVSSHSNDVGLTALHLDPLPKGPDRDDVAETFYLVDLADSSLAAELKEAGKSVVYQGTHGDEHLSNVDVILPGATFVEKEGVYVNTEGRPQRSAMVFPPPGIAREDWKIVRALGEFVGVTLPYSDEEEMEERVRTLVPLTMNMDELSHSQMGPIQDVPTGEVQVH-ETTIGPLIHDFYRTDAVSRASVTMAK 1710 RG+H G + S E++ PVGALTS PYAF ARPWEL+ ESIDV+D VGSNIR+D + EVMRVLPR +E++N EWI DKARFSYDGLKRQRLD PY G LAP TW + F A VA + A + G D+E A+KDL + +G+ + A D N + + +D+AD +L VG N RLEA ++N R+R+R+L+GG+ + +G LTY H++LG L D+A G HPF + L A +P+++ G L R D A+I+ALL +L + K + ++ A + V + GL A P + E YL+ AD ++L + VVYQG HGD DVILP A + EK YVNTEGR QR+ PPG AREDW IVRAL +G LPY + +++ R+ + P+ +D ++ ++ P+ +GE +V + + + +FYRTD +SRAS+TMAK Sbjct: 170 RGEHMEVGTYVGRALSSELSGNMIDLCPVGALTSAPYAFTARPWELKKTESIDVTDAVGSNIRIDARGNEVMRVLPRLHEDVNEEWISDKARFSYDGLKRQRLDTPYVRKDG-----KLAPATWDEAFAAIQIRVAALGGDKIAAIAGDQADVEAMCALKDLMVNLGSPHIDCRQDGAPLDAANRGGYLFNSTIAGIDEADAVLIVGSNPRLEAPIINARLRKRYLKGGVKIAAVGPQADLTYRHEHLGDGLGVLRDIAGGGHPFADVLKGAARPMVIVGQGALARADGAAILALLSALVEKLGVVKDGWNGFNVLHGAAARVGGLDIGFVPAKG---GLAA----PAIAEAAKSGAIEVLYLLG-ADEIDMSDLGDV--FVVYQGHHGDVGAHRADVILPAAAYTEKNATYVNTEGRVQRTLRAVFPPGEAREDWAIVRALSAVLGKPLPYDNLDQVRRRMTEVNPVFATLDAITPAKWLPL----SGEGEVFSDHPLVSCVENFYRTDPISRASITMAK 671
BLAST of mRNA_A-nodosum_M_contig1009.3.2 vs. uniprot
Match: A0A2U1PTP3_ARTAN (NADH-ubiquinone oxidoreductase n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1PTP3_ARTAN) HSP 1 Score: 324 bits (831), Expect = 6.820e-98 Identity = 195/501 (38.92%), Postives = 285/501 (56.89%), Query Frame = 1 Query: 250 LEITPVGALTSKPYAFQARPWELRHAESIDVSDGVGSNIRVDFKETEVMRVLPRENEEINSEWIHDKARFSYDGLKRQRLDRPYTMLMGDDGAPSLAPVTWKQGFEAVADMVD--RPTAFV--VGRGMDLETAVAVKDLALRMGNAAVYKEGGIAGED------YPNHLKLKDVDDADLILHVGLNARLEATMLNVRIRQRWLRGGLTVGTIGAPVRLTYDHQNLGLTPTSLIDLANGNHPFCEALAAAEKPLILYGSAVLERDDAASIVALLKSLNTQTKASKKKSHSASIFFRCIAGEAKDCVHLVSSHSNDVGLTALHLDPLPKGPDRDDVAETFYLVDLADSSLAAELKEAGKSVVYQGTHGDEHLSNVDVILPGATFVEKEGVYVNTEGRPQRSAMVFPPPGIAREDWKIVRALGEFVGVTLPYSDEEEMEERVRTLVPLTMNMDELSHSQMGPIQDVPTGEVQVHETTIGPLIHDFYRTDAVSRASVTMAKTSAL 1722 ++I PVGALTSKP+AF+AR WEL+ ESIDV+D VGSNIR+D + EVMR++PR NE+IN EWI DK RF YDGLKRQRL+ P M+ G DG PV+W+ VA+++ +P V G+ D E+ + +KD ++G+ ++ EG + Y + ++ ++ AD L VG R+EA M+N RIR+ VG IG+P YDH++LG P +L+++A G H F AL+ A+ P I+ G+ + ER+D +I ++++S+ + + + + A +A AL L +P+ + + A+ YL+ D +L K+A VVYQG HGD+ + +VILP A F EKEG YVNTEG Q++ P G AREDWKI+RAL E GV+LPY + R+RT+ P +++DE + P ++ T G + +FY TDA++RAS MA+ SAL Sbjct: 10 IDICPVGALTSKPFAFKARNWELKGTESIDVTDAVGSNIRIDSRGPEVMRIVPRLNEDINEEWISDKTRFCYDGLKRQRLNDP--MIRGADGR--FQPVSWRDALAVVAEVIHQVKPEEIVGVAGKLSDAESMILLKDFLNKLGSNNIWCEGNGKNTNADLRSGYLLNSSIQGLEKADCFLLVGTQPRVEAAMVNARIRKTVRATQAKVGYIGSPADFNYDHEHLGTGPETLVEIAEGRHSFSSALSKAKNPAIIIGAGIFEREDKDAIFSVIQSIAAKNENLIRPDWNGVNVLLLNAAQA----------------AALDLGLVPESDNSIESAKFLYLMGADDVNLDKLPKDA--FVVYQGHHGDKGVYRANVILPAAAFSEKEGTYVNTEGCAQQTVPAVPTVGDAREDWKIIRALSEVSGVSLPYDTISGVRSRIRTVAPNLLHVDEREPATFSTSLK-PASTSKMSATPFGVTVDNFYMTDAITRASKIMAQCSAL 487
BLAST of mRNA_A-nodosum_M_contig1009.3.2 vs. uniprot
Match: A0A512DK29_9PROT (NADH-quinone oxidoreductase n=1 Tax=Skermanella aerolata TaxID=393310 RepID=A0A512DK29_9PROT) HSP 1 Score: 330 bits (847), Expect = 7.130e-98 Identity = 205/499 (41.08%), Postives = 275/499 (55.11%), Query Frame = 1 Query: 250 LEITPVGALTSKPYAFQARPWELRHAESIDVSDGVGSNIRVDFKETEVMRVLPRENEEINSEWIHDKARFSYDGLKRQRLDRPYTMLMGDDGAPSLAPVTWKQGFEAVADMVD----RPTAFVVGRGMDLETAVAVKDLALRMGN--------AAVYKEGGIAGEDYPNHLKLKDVDDADLILHVGLNARLEATMLNVRIRQRWLRGGLTVGTIGAPVRLTYDHQNLGLTPTSLIDLANGNHPFCEALAAAEKPLILYGSAVLERDDAASIVALLKSLNTQTKASKKKSHSASIFFRCIAGEAKDCVHLVSSHSNDVGLTALHLDPLPKGPDRDDVAETFYLVDLADSSLAAELKEAGKSVVYQGTHGDEHLSNVDVILPGATFVEKEGVYVNTEGRPQRSAMVFPPPGIAREDWKIVRALGEFVGVTLPYSDEEEMEERVRTLVPLTMNMDELSHSQMGPIQDVPTGEVQVHETTIGPLIHDFYRTDAVSRASVTMAK 1710 +++ PVGALTSKPYAF RPWELR E+IDV D VGSNIRVD + EVMRV+PR NE++N EW+ DK+RFSYDGLKRQRLDRPY G L P TW + F A+A V A + G +D E+ VA+KDL +G+ AV+ AG Y + + ++ AD IL +G N R EA ++N RIR+R+L GGL VG IG + LTY LG P +L D+ +G H FC+ L A++P+++ GS L R D ++ AL + L + + ++ A + + TA L G + YL+ AD A L +A V+YQG HGD DVILPGA + EK G+YVNTEGR Q + M P G AREDWKI+RALGE +GV LPY + +R+ P+ +++ L ++ G T + P+I ++Y TD +SRAS TMAK Sbjct: 193 IDVCPVGALTSKPYAFTTRPWELRKTETIDVMDAVGSNIRVDTRGPEVMRVIPRLNEDVNEEWLADKSRFSYDGLKRQRLDRPYVRKDG-----KLQPATWAEAFAAIAAKVKGVPGERIAALAGDLVDAESMVALKDLVEGLGSRNLDCRQDGAVFDTSARAG--YLFNTTIAGIEQADAILLIGTNPRWEAAIVNARIRKRYLMGGLKVGVIGQQLDLTYPTTYLGAGPQTLQDVVDGKHAFCDVLKDAKRPMLILGSGALRRADGPAVHALARQLAESFNLVQDGWNGFNVLHTAAARVGGLELGFLPGQGGKA--TAEILSATSAGQ-----IDVVYLLG-ADEIDTASLGKA--FVIYQGHHGDRGAHRADVILPGAAYTEKNGLYVNTEGRVQMARMAAFPLGEAREDWKIIRALGEQLGVKLPYDSLSHVRKRLADASPVFRSIEALVAAEWGTFGRAGT----IENAPFEPIIENYYMTDPISRASATMAK 670
BLAST of mRNA_A-nodosum_M_contig1009.3.2 vs. uniprot
Match: A0A821CRH1_9NEOB (NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial n=3 Tax=Hyloidea TaxID=8417 RepID=A0A821CRH1_9NEOB) HSP 1 Score: 331 bits (848), Expect = 1.300e-97 Identity = 200/520 (38.46%), Postives = 290/520 (55.77%), Query Frame = 1 Query: 250 LEITPVGALTSKPYAFQARPWELRHAESIDVSDGVGSNIRVDFKETEVMRVLPRENEEINSEWIHDKARFSYDGLKRQRLDRPYTMLMGDDGAPSLAPVTWKQGFEAVADMVD----RPTAFVVGRGMDLETAVAVKDLALRMGNAA-----VYKEGGIAGEDYPNHL---KLKDVDDADLILHVGLNARLEATMLNVRIRQRWLRGGLTVGTIGAPVRLTYDHQNLGLTPTSLIDLANGNHPFCEALAAAEKPLILYGSAVLERDDAASIVALLKSLNTQTKASKKKSHSASIFFRCIAGEAKDCVHLVSSH--SNDVGLTALHLDPLPKGPDRDDVAETFYLVDLADSSLAAELKEAGKSVVYQGTHGDEHLSNVDVILPGATFVEKEGVYVNTEGRPQRSAMVFPPPGIAREDWKIVRALGEFVGVTLPYSDEEEMEERVRTLVPLTMNMDELSHSQMGPIQDVPTGEVQVHETTIGPL------IHDFYRTDAVSRASVTMAKTSALHRESANTWE 1749 +++ PVGALTSKPYAF ARPWE R ESIDV D +GSNI V + EVMR+LP+ +E+IN EWI DK RF+YDGLKRQRL +P M+ D G L P W+ VA ++ + A + G +D E VA+KDL R+ + + V+ G + N+L ++ V++AD++L +G N R EA + N RIR+ WL L V +G+PV LTY + +LG +P + D+A+G HPF + L A+KP+I+ GS+ L+R D A+I A + ++ ++S S + + + + V+S + D+G +D + K P + +L+ + + G ++YQG HGD DVILPGA + EK G YVNTEGR Q++ + PPG+AREDWKI+RAL E GVTLPY + + + R+ + P + D++ + Q V ++ + PL I DFY TD ++RAS TMAK E A E Sbjct: 221 IDLCPVGALTSKPYAFTARPWETRKTESIDVLDALGSNIVVSTRGGEVMRILPKMHEDINEEWISDKTRFAYDGLKRQRLTQP--MIKDDKGY--LVPAAWEDVLTRVAGVLQCVQGKDVAAIAGGLVDAEALVALKDLLNRLNSDSLCTEEVFPNSGAGSDLRSNYLLNSRIAGVEEADVLLLIGTNPRYEAPLFNARIRKSWLHNDLQVAVVGSPVDLTYTYDHLGESPQIIKDIASGKHPFSKVLNQAKKPMIVVGSSALQRKDGAAIHAAVSAVAQNARSSSGVSENWKVL---------NILQRVASQVAALDLGYKP-GVDAIRKNPPK-----VLFLLGADAGCITRQDLPKGCFIIYQGHHGDVGAPMADVILPGAAYTEKSGTYVNTEGRAQKTLLAVSPPGMAREDWKIIRALSELAGVTLPYDNLDAVRNRLHEVSPNLVRYDDVEEANYFK-QAVELSQLAAQQLLADPLVAPQLSIKDFYMTDPITRASQTMAKCVKAVTEGAQAIE 720
BLAST of mRNA_A-nodosum_M_contig1009.3.2 vs. uniprot
Match: A0A2V3UB99_9HYPH (NADH-quinone oxidoreductase n=3 Tax=Chelatococcus TaxID=28209 RepID=A0A2V3UB99_9HYPH) HSP 1 Score: 330 bits (845), Expect = 1.610e-97 Identity = 206/509 (40.47%), Postives = 279/509 (54.81%), Query Frame = 1 Query: 250 LEITPVGALTSKPYAFQARPWELRHAESIDVSDGVGSNIRVDFKETEVMRVLPRENEEINSEWIHDKARFSYDGLKRQRLDRPYTMLMGDDGAPSLAPVTWKQGFEAVADMVD--RPTAF--VVGRGMDLETAVAVKDLALRMGNA---------AVYKEGGIAGEDYPNHLKLKDVDDADLILHVGLNARLEATMLNVRIRQRWLRGGLTVGTIGAPVRLTYDHQNLGLTPTSLIDLANGNHPFCEALAAAEKPLILYGSAVLERDDAASIVALLKSLNTQTKASKKKSHSASIFFRCIAGEAKDCVHLVSSHSNDVGLTALHLDPLPKGPDRD-----DVAETFYLVDLADSSLAAELKEAGKSVVYQGTHGDEHLSNVDVILPGATFVEKEGVYVNTEGRPQRSAMVFPPPGIAREDWKIVRALGEFVGVTLPYSDEEEMEERVRTLVPLTMNMDELSHSQMGPIQDVPTGEVQVHETTIGPLIHDFYRTDAVSRASVTMAKTSAL 1722 +++ PVGALTSKPYAFQARPWEL ESIDV DG+GS IRVD + EVMR+LPR N+ +N EWI DK RF +DGL+RQRLDRPY G L P +W + F A+A V +P +VG +E + A+K L ++G+A A+ +GG A Y + + +DDAD IL VG N R+E ++LN RIR+RW G +++G IG V LTY ++ LG P +L DL NG+H F + LA A++PLI+ G L R D A++ AL L A K + S+ +H +S VG L L P G D D + +L+ ++ +A G VVYQGTHGD DVILPGA + EK G YVNTEGR Q + PPG AREDW I+RAL + +G LP+ ++ + + P ++D + + V V E ++DFY T+ ++RAS MA+ SAL Sbjct: 202 IDLCPVGALTSKPYAFQARPWELTKTESIDVMDGLGSAIRVDARGREVMRILPRTNDAVNEEWISDKTRFIWDGLRRQRLDRPYLRENG-----KLRPASWNEAFAAIAMKVKAAKPERIGAIVGDLASVEDSFALKLLMEKLGSANIDGRGDGTALDPKGGRAS--YLFNATIAGIDDADAILIVGSNPRIEGSVLNARIRKRWRSGPVSIGLIGEAVDLTYPYEYLGAGPATLTDLVNGDHSFTKVLAEAKRPLIILGQGALTRADGAAVQALAAKLALAVGAVKDGWNGFSV------------LHTAASR---VGSLELGLVPGEGGLDARAMAGADALDVLFLLGADEAEVAP-----GAFVVYQGTHGDNGAHRADVILPGAAYTEKSGTYVNTEGRVQLANRAAFPPGDAREDWAILRALSDVIGQRLPFDSLSQLRQTLYATYPEFADIDSVLVGDPAGLAAVAAAGGAVSEAAFVSAVNDFYLTNPIARASTVMAECSAL 683
BLAST of mRNA_A-nodosum_M_contig1009.3.2 vs. uniprot
Match: UPI001EB0677D (NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial-like n=2 Tax=Haliotis TaxID=6452 RepID=UPI001EB0677D) HSP 1 Score: 330 bits (847), Expect = 1.770e-97 Identity = 203/511 (39.73%), Postives = 284/511 (55.58%), Query Frame = 1 Query: 250 LEITPVGALTSKPYAFQARPWELRHAESIDVSDGVGSNIRVDFKETEVMRVLPRENEEINSEWIHDKARFSYDGLKRQRLDRPYTMLMGDDGAPSLAPVTWKQGFEAVADMVDRPT----AFVVGRGMDLETAVAVKDLALRMGNAAVYKE--------GGIAGEDYPNHLKLKDVDDADLILHVGLNARLEATMLNVRIRQRWLRGGLTVGTIGAPVRLTYDHQNLGLTPTSLIDLANGNHPFCEALAAAEKPLILYGSAVLERDDAASIVALLKSLNTQTKASKKKSHSASIFFRCIAG---EAKDCVHLVSSH--SNDVGLTALHLDPLPKGPDRDDVAETFYLVDLADSSLAAELKEAGKSVVYQGTHGDEHLSNVDVILPGATFVEKEGVYVNTEGRPQRSAMVFPPPGIAREDWKIVRALGEFVGVTLPYSDEEEMEERVRTLVPLTMNMDELSHS-------QMGPIQDVPTGEVQVHETTIGPLIHDFYRTDAVSRASVTMAK 1710 +++ PVGALTSKPYAF ARPWE + ESIDV DG+GSNI V + EVMR++PR NEEIN EWI DK RF+YDGLKRQRL P+ + +L W+ F VA + + A V G +D E +++KDL R+G+ + E G +Y + + V++ADL+L VG N R EA + N RIR+ W+ L V +G PV LTY++ LG T + L LA+G HPFC+ L AA+KP+I+ GS +L+R+D A+I A + +L ++S C G + + +H V+S + D+G A +D + + P + +L+ + ++ E VVYQG HGD DVILPGA + EK+ YVNTEGR Q + PPG+AR DWKI+RAL E VGVTLPY E+ R+ + P + ++ + Q+ + P G + T + DFY TD++SRAS TMAK Sbjct: 227 IDLCPVGALTSKPYAFTARPWETKKVESIDVMDGLGSNIVVTMRTNEVMRIVPRMNEEINEEWISDKTRFAYDGLKRQRLTSPFVK----NSQGNLVATDWENAFIRVAQKLREVSGDQVAAVAGGQVDAEALISLKDLLNRLGSEGLCTEEIFPMDGAGTDLRSNYLLNTGIAGVEEADLVLLVGTNPRYEAPIFNARIRKSWIHNDLRVAMVGTPVDLTYEYDQLGDTASVLESLASGKHPFCQTLNAAKKPIIVVGSGLLQREDGAAIHAAVSTLAESVRSS------------CGCGPDWKVLNVLHRVASQVAALDLGYKA-GVDHIRQNPPK-----VLFLLGADEGAITREDLPKDCFVVYQGHHGDRGAEMADVILPGAAYTEKDVTYVNTEGRAQLTRTAVTPPGLARVDWKIIRALSEMVGVTLPYDKITEVRRRLGEVAPNLARVGDVEDANYFTQAQQLAQLGKKPLGASPL--TPSQQDLKDFYMTDSISRASQTMAK 713
BLAST of mRNA_A-nodosum_M_contig1009.3.2 vs. uniprot
Match: A0A8G2F191_9PROT (NADH-quinone oxidoreductase n=2 Tax=Thalassobaculum TaxID=526215 RepID=A0A8G2F191_9PROT) HSP 1 Score: 330 bits (845), Expect = 1.870e-97 Identity = 204/510 (40.00%), Postives = 286/510 (56.08%), Query Frame = 1 Query: 250 LEITPVGALTSKPYAFQARPWELRHAESIDVSDGVGSNIRVDFKETEVMRVLPRENEEINSEWIHDKARFSYDGLKRQRLDRPYTMLMGDDGAPSLAPVTWKQGFEAVADMVDR----PTAFVVGRGMDLETAVAVKDLALRMGNAAV------YKEGGIAGEDYPNHLKLKDVDDADLILHVGLNARLEATMLNVRIRQRWLRGGLTVGTIGAPVRLTYDHQNLGLTPTSLIDLANGNHPFCEALAAAEKPLILYGSAVLERDDAASIVALLKSLNTQTK---ASKKKSHSASIFFRCIAGEAKDCVHLVSSHSNDVGLTALHLDPLPKGPDRD----------DVAETFYLVDLADSSLAAELKEAGKSVVYQGTHGDEHLSNVDVILPGATFVEKEGVYVNTEGRPQRSAMVFPPPGIAREDWKIVRALGEFVGVTLPYSDEEEMEERVRTLVPLTMNMDELSHSQMGPIQDVPTGEVQVHETTIGPLIHDFYRTDAVSRASVTMAK 1710 +++ PVGALTSKPYAF ARPWEL+ ES+DV D VGSNIRVD + EV+RVLPR +E++N EWI DK R++ DGLKRQRLDRPY G L P +W + F AVA + A + G +D E+ A+K L +G+A + K GG A + + + +++AD IL VG N R EA ++N RIR+RW+ + +G IGAPV LTYD+++LG P +L ++A+G+H F + L A++P+I+ G L R+D A+++A + + T A+ K I A + +H +S + L + LP RD + YL LA +A+E +A VVYQG HGD DVILPGA + EK+G+Y NTEGR Q PPG AREDWKI+RAL E VG TLP++ E++ +R P +D + ++ GP + +T + +FY TD +SRAS TMA+ Sbjct: 193 IDLCPVGALTSKPYAFVARPWELKKTESVDVMDAVGSNIRVDARGAEVLRVLPRLHEDVNEEWISDKTRYACDGLKRQRLDRPYVRKDG-----KLQPASWPEAFAAVAGAMKGLKGDQMAAIAGDTVDAESMYALKRLMGDLGSANIDCRQDGAKIGGGARSGHLFNTTIAGIEEADAILLVGTNPRWEAALVNARIRKRWMAAPVAIGLIGAPVDLTYDYEHLGAGPKTLAEVADGSHAFAKVLKDAKRPMIVVGMGALTREDGAAVLAAARKIADDTGMVIAASKDDEGTEI----PAWNGFNVLHTAASR-----VAGLDMGFLPGEGGRDVAGIVEGAKSGAVKLVYL--LAADEVASEFGDA--FVVYQGHHGDNGAHGADVILPGAAYTEKDGLYANTEGRIQMGVAATFPPGEAREDWKILRALSEAVGKTLPFTTLEDVRVALRKDFPTFAAIDTIEPAEWGPFGAAGATD----DTPFAYPVDNFYMTDPISRASKTMAE 680 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1009.3.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1009.3.2 >prot_A-nodosum_M_contig1009.3.2 ID=prot_A-nodosum_M_contig1009.3.2|Name=mRNA_A-nodosum_M_contig1009.3.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=582bp MLARKGVATRVAAAVTRSVIEGFGCEGKRCAMSYAAFASSPSSSSATDADback to top mRNA from alignment at A-nodosum_M_contig1009:38695..51100+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig1009.3.2 ID=mRNA_A-nodosum_M_contig1009.3.2|Name=mRNA_A-nodosum_M_contig1009.3.2|organism=Ascophyllum nodosum dioecious|type=mRNA|length=12406bp|location=Sequence derived from alignment at A-nodosum_M_contig1009:38695..51100+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig1009:38695..51100+ >mRNA_A-nodosum_M_contig1009.3.2 ID=mRNA_A-nodosum_M_contig1009.3.2|Name=mRNA_A-nodosum_M_contig1009.3.2|organism=Ascophyllum nodosum dioecious|type=CDS|length=1746bp|location=Sequence derived from alignment at A-nodosum_M_contig1009:38695..51100+ (Ascophyllum nodosum dioecious)back to top |