mRNA_A-nodosum_M_contig10078.4.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig10078.4.1
Unique NamemRNA_A-nodosum_M_contig10078.4.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
BLAST of mRNA_A-nodosum_M_contig10078.4.1 vs. uniprot
Match: D7FTP3_ECTSI (Putative GPI-anchor transamidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTP3_ECTSI)

HSP 1 Score: 440 bits (1131), Expect = 6.960e-152
Identity = 233/318 (73.27%), Postives = 251/318 (78.93%), Query Frame = 1
Query:    1 SSVLLFLGCIPLVAA-RIIPTTWAGVGDGASRHNNNWAVLAESGANSRDSSRFPRRLPFMYTANRHRVCTSRFWFNYRHVANTLSVYHTVRRLGIPDSNIVLMLADDMPCNARNPFPAGVYNSKDHELNLYEGDVEVDYRGEEVSVESFLRLLTGRTLPGPPPSKMLATNEHSNVLIYMNGHGGDQFLKFHDMEEVSSHDLGGALREMELKKRYHRVLFMVDTCQAMTLFDEITSPEVLCIGSSVRGENSYAKGSDTTIGLSLMDRFTSAMLDFFQAAMAK-EDPSVTRVRQFDG--MAPVTLPDYVSQVCLGNSCQP 942
            S  +L L  +PL +A  +  +T AG    +SRHNNNWAVL                           VCTSRFWFNYRHVANTLSVYHTVRRLGIPDSNIVLMLADDMPCNARNPFP GVYNSKDHELNLYEGDVEVDYRGEEVSVESFLRLLTGRTLPG PPSK LAT+EHSNVLIYMNGHGGDQFLKFHDMEEVSSHDLGGALREMELKKRYHRVLFMVDTCQAMTLF+EI S +V+CIGSSVRGENSYA+GSD TIGLSLMDRFTSAMLDFFQAA+ K ED +  RVR F     AP+ L + V+   L +S +P
Sbjct:   31 SLAVLLLCSVPLFSAVGVTASTAAGAKGASSRHNNNWAVL---------------------------VCTSRFWFNYRHVANTLSVYHTVRRLGIPDSNIVLMLADDMPCNARNPFPGGVYNSKDHELNLYEGDVEVDYRGEEVSVESFLRLLTGRTLPGTPPSKTLATDEHSNVLIYMNGHGGDQFLKFHDMEEVSSHDLGGALREMELKKRYHRVLFMVDTCQAMTLFEEIDSKDVICIGSSVRGENSYARGSDATIGLSLMDRFTSAMLDFFQAAITKGEDVTANRVRGFSSGNSAPLNLRNDVTLGALMHSMRP 321          
BLAST of mRNA_A-nodosum_M_contig10078.4.1 vs. uniprot
Match: A0A7S2V326_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V326_9STRA)

HSP 1 Score: 308 bits (789), Expect = 1.300e-100
Identity = 154/252 (61.11%), Postives = 184/252 (73.02%), Query Frame = 1
Query:   76 GDGAS--RHNNNWAVLAESGANSRDSSRFPRRLPFMYTANRHRVCTSRFWFNYRHVANTLSVYHTVRRLGIPDSNIVLMLADDMPCNARNPFPAGVYNSKDHELNLYEGDVEVDYRGEEVSVESFLRLLTGRTLPGPPPSKMLATNEHSNVLIYMNGHGGDQFLKFHDMEEVSSHDLGGALREMELKKRYHRVLFMVDTCQAMTLFDEITSPEVLCIGSSVRGENSYAKGSDTTIGLSLMDRFTSAMLDFFQ 825
            GDG    RHNNNW VL                           V TSRFWFNYRH+ANTLS+YHTV+RLGIPDS I+LMLADDMPCNARNP+P  +YN+KD +LNLY   VEVDYRG +V+VE+FLRLLTGRT PG P SK+L T+EHSN+LI+M+GHGGD FLKF D EEVSSHD+  A+ EM +K RYH +L +VDTCQA TL  +I SP V+ IGSS  GENSYA  SD ++G++++DRFT A LDFF+
Sbjct:   23 GDGTEKLRHNNNWVVL---------------------------VSTSRFWFNYRHIANTLSIYHTVKRLGIPDSQIILMLADDMPCNARNPYPGEIYNNKDRKLNLYGDVVEVDYRGTDVTVENFLRLLTGRTKPGLPFSKLLNTDEHSNILIFMSGHGGDGFLKFQDSEEVSSHDIADAIEEMNIKGRYHEILLIVDTCQAGTLGQQIYSPNVVSIGSSKLGENSYAHHSDHSLGVAVIDRFTEATLDFFE 247          
BLAST of mRNA_A-nodosum_M_contig10078.4.1 vs. uniprot
Match: A0A804L7S9_MUSAM (Uncharacterized protein n=3 Tax=Musa TaxID=4640 RepID=A0A804L7S9_MUSAM)

HSP 1 Score: 291 bits (744), Expect = 9.740e-93
Identity = 149/272 (54.78%), Postives = 191/272 (70.22%), Query Frame = 1
Query:   10 LLFLGCIPLVAARIIPTTWAGVGDGASRHNNNWAVLAESGANSRDSSRFPRRLPFMYTANRHRVCTSRFWFNYRHVANTLSVYHTVRRLGIPDSNIVLMLADDMPCNARNPFPAGVYNSKDHELNLYEGDVEVDYRGEEVSVESFLRLLTGRTLPGPPPSKMLATNEHSNVLIYMNGHGGDQFLKFHDMEEVSSHDLGGALREMELKKRYHRVLFMVDTCQAMTLFDEITSPEVLCIGSSVRGENSYAKGSDTTIGLSLMDRFTSAMLDFFQ 825
            LLFL  +PL ++   P++WA      + HNNNWAVL                           VCTSRFWFNYRH+ANTLS+Y TV+RLGIPD  I+LMLADDM CNARN +PA V+N+++H+LNLY  +VEVDYRG EV+VE+FLR+LTGR  P  P SK L ++E S++L+YM GHGGD+FLKF D EE+ SHDL  A+R+M+ K R+  +L MVDTCQA TLF ++ SP VL IGSS++GENSY+   D+ IG+S++DRFT   L FF+
Sbjct:   16 LLFLVLVPLTSSS--PSSWA------TMHNNNWAVL---------------------------VCTSRFWFNYRHMANTLSLYRTVKRLGIPDERIILMLADDMACNARNNYPAQVFNNENHQLNLYGDNVEVDYRGYEVTVENFLRVLTGRHDPAVPRSKRLLSDEGSHILLYMTGHGGDEFLKFQDSEELQSHDLADAVRQMKEKSRFKELLIMVDTCQAATLFSQLQSPGVLAIGSSMKGENSYSHHLDSNIGVSVVDRFTFYTLAFFE 252          
BLAST of mRNA_A-nodosum_M_contig10078.4.1 vs. uniprot
Match: UPI001FB0F723 (putative GPI-anchor transamidase n=2 Tax=Impatiens glandulifera TaxID=253017 RepID=UPI001FB0F723)

HSP 1 Score: 287 bits (735), Expect = 3.280e-91
Identity = 148/273 (54.21%), Postives = 190/273 (69.60%), Query Frame = 1
Query:   10 LLFLGCIPLVAARIIPTTWAGVGDGAS-RHNNNWAVLAESGANSRDSSRFPRRLPFMYTANRHRVCTSRFWFNYRHVANTLSVYHTVRRLGIPDSNIVLMLADDMPCNARNPFPAGVYNSKDHELNLYEGDVEVDYRGEEVSVESFLRLLTGRTLPGPPPSKMLATNEHSNVLIYMNGHGGDQFLKFHDMEEVSSHDLGGALREMELKKRYHRVLFMVDTCQAMTLFDEITSPEVLCIGSSVRGENSYAKGSDTTIGLSLMDRFTSAMLDFFQ 825
            +LFLG   L  A I  TT++     A+ +H NNWAVL                           VCTSRFWFNYRH+ANTLS+Y TV+RLGIPD  I+LMLADDM CNARN +PA V+N+K+H+LNLY  +VEVDYRG EV+VE+FLR+LTGR     P SK L ++E S++L+YM GHGGD+FLKF D EE+ SHDL  A+R+M+ K R+  +L MVDTCQA TLF+++ SP VL IGSS++GENSY+   D+ +G+S++DRFT   L FF+
Sbjct:   22 ILFLGSTCLCDAAIAQTTFSSSSSSATTKHTNNWAVL---------------------------VCTSRFWFNYRHMANTLSLYRTVKRLGIPDERIILMLADDMACNARNKYPAQVFNNKNHKLNLYGDNVEVDYRGYEVTVENFLRVLTGRHETSVPRSKRLLSDEGSHILLYMTGHGGDEFLKFQDSEELQSHDLADAVRQMKEKLRFKELLIMVDTCQAATLFNQLVSPGVLSIGSSMKGENSYSHHLDSDVGVSVVDRFTYYTLAFFE 267          
BLAST of mRNA_A-nodosum_M_contig10078.4.1 vs. uniprot
Match: A0A2P2JFN2_RHIMU (GPI-anchor transamidase family protein n=1 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2JFN2_RHIMU)

HSP 1 Score: 282 bits (722), Expect = 7.050e-90
Identity = 144/268 (53.73%), Postives = 185/268 (69.03%), Query Frame = 1
Query:   94 HNNNWAVLAESGANSRDSSRFPRRLPFMYTANRHRVCTSRFWFNYRHVANTLSVYHTVRRLGIPDSNIVLMLADDMPCNARNPFPAGVYNSKDHELNLYEGDVEVDYRGEEVSVESFLRLLTGRTLPGPPPSKMLATNEHSNVLIYMNGHGGDQFLKFHDMEEVSSHDLGGALREMELKKRYHRVLFMVDTCQAMTLFDEITSPEVLCIGSSVRGENSYAKGSDTTIGLSLMDRFTSAMLDFFQAAMAKEDPSVTRVRQFDGMAPVTL 897
            H NNWAVL                           VCTSRFWFNYRH+ANTLS+Y TV+RLGIPD  I+LMLADDM CN+RN FPA V+N+++H LNLY  +VEVDYRG EV+VE+F R+LTGR  P  P SK L ++E S+VL+YM GHGGD+FLKF D EE+ SHDL  A+R+M+ K R+  +L MVDTCQA TLFD++ SP VL IGSS++GENSY+   D+ +G+S++DRFT   L FF+     ++ S++ +  F+   P TL
Sbjct:    2 HTNNWAVL---------------------------VCTSRFWFNYRHMANTLSLYRTVKRLGIPDERIILMLADDMACNSRNKFPAQVFNNENHRLNLYGDNVEVDYRGYEVTVENFFRVLTGRHAPAVPRSKRLLSDEGSHVLLYMTGHGGDEFLKFQDSEELQSHDLADAVRQMKEKHRFKELLIMVDTCQAATLFDQLHSPGVLAIGSSMKGENSYSHHLDSDVGVSVVDRFTFYTLAFFERLNMYDNASLSSL--FNSYDPNTL 240          
BLAST of mRNA_A-nodosum_M_contig10078.4.1 vs. uniprot
Match: UPI001C4BAFD5 (putative GPI-anchor transamidase n=2 Tax=Zingiber officinale TaxID=94328 RepID=UPI001C4BAFD5)

HSP 1 Score: 282 bits (721), Expect = 2.750e-89
Identity = 148/295 (50.17%), Postives = 199/295 (67.46%), Query Frame = 1
Query:   13 LFLGCIPLVAARIIPTTWAGVGDGASRHNNNWAVLAESGANSRDSSRFPRRLPFMYTANRHRVCTSRFWFNYRHVANTLSVYHTVRRLGIPDSNIVLMLADDMPCNARNPFPAGVYNSKDHELNLYEGDVEVDYRGEEVSVESFLRLLTGRTLPGPPPSKMLATNEHSNVLIYMNGHGGDQFLKFHDMEEVSSHDLGGALREMELKKRYHRVLFMVDTCQAMTLFDEITSPEVLCIGSSVRGENSYAKGSDTTIGLSLMDRFTSAMLDFFQAAMAKEDPSVTRVRQFDGMAPVTL 897
            L L  +PL+A+    ++WA      S H+NNWAVL                           VCTSR+WFNYRH+ANTLS+Y TV+RLGIPD  I+LMLADDM CN RN +PA V+N+++H+LNLY  +VEVDYRG EV+VE+F+R+LTGR  P  P SK L ++E S++L+YM GHGGD+FLKF D EE+ SHDL  A+++M+ K R+  +L MVDTCQA TLF+++ SP VL IGSS++GENSY+   D+ IG+S++DRFT   L FF+      + S++ +  F+   P TL
Sbjct:   17 LLLFSVPLIASS---SSWA------SMHHNNWAVL---------------------------VCTSRYWFNYRHMANTLSLYRTVKRLGIPDERIILMLADDMACNMRNNYPAQVFNNENHQLNLYGDNVEVDYRGYEVTVENFMRVLTGRHDPAVPRSKRLLSDEGSHILLYMTGHGGDEFLKFQDSEELQSHDLADAVKQMKEKNRFKELLIMVDTCQAATLFNQLQSPGVLAIGSSMKGENSYSHHLDSDIGVSVVDRFTYYTLAFFEKLNMYSNASLSSL--FNSYNPRTL 273          
BLAST of mRNA_A-nodosum_M_contig10078.4.1 vs. uniprot
Match: A0A7I8K0I5_SPIIN (Hypothetical protein n=2 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8K0I5_SPIIN)

HSP 1 Score: 281 bits (719), Expect = 6.020e-89
Identity = 145/274 (52.92%), Postives = 188/274 (68.61%), Query Frame = 1
Query:    4 SVLLFLGCIPLVAARIIPTTWAGVGDGASRHNNNWAVLAESGANSRDSSRFPRRLPFMYTANRHRVCTSRFWFNYRHVANTLSVYHTVRRLGIPDSNIVLMLADDMPCNARNPFPAGVYNSKDHELNLYEGDVEVDYRGEEVSVESFLRLLTGRTLPGPPPSKMLATNEHSNVLIYMNGHGGDQFLKFHDMEEVSSHDLGGALREMELKKRYHRVLFMVDTCQAMTLFDEITSPEVLCIGSSVRGENSYAKGSDTTIGLSLMDRFTSAMLDFFQ 825
            +VLLFLG + ++  +    +       ++ HNNNWAVL                           VCTSRFWFNYRH+ANTLS+Y TV+RLGIPD  I+LMLADDM CNARN +PA V+N+++H++NLY  +VEVDYRG EV+VE+FLR+LTGR     P SK L ++E S++L+YM GHGGDQFLKF D EE+ SHDL  A+++M  K+R+  +L MVDTCQA TLF +  SP VL IGSSV+GENSY+   D+ IG+S++DRFT   L FF+
Sbjct:   14 AVLLFLGLVSMLHPQSSHAS-------SAMHNNNWAVL---------------------------VCTSRFWFNYRHMANTLSLYRTVKRLGIPDERIILMLADDMACNARNNYPAQVFNNENHQINLYGDNVEVDYRGYEVTVENFLRVLTGRHETAVPRSKRLLSDEGSHILLYMTGHGGDQFLKFQDSEELQSHDLADAVKQMSEKQRFKELLIMVDTCQAATLFSQFDSPGVLSIGSSVKGENSYSHHLDSDIGVSVVDRFTFYTLAFFE 253          
BLAST of mRNA_A-nodosum_M_contig10078.4.1 vs. uniprot
Match: B8LLJ3_PICSI (Uncharacterized protein n=1 Tax=Picea sitchensis TaxID=3332 RepID=B8LLJ3_PICSI)

HSP 1 Score: 281 bits (719), Expect = 7.210e-89
Identity = 140/265 (52.83%), Postives = 183/265 (69.06%), Query Frame = 1
Query:   76 GDGASRHNNNWAVLAESGANSRDSSRFPRRLPFMYTANRHRVCTSRFWFNYRHVANTLSVYHTVRRLGIPDSNIVLMLADDMPCNARNPFPAGVYNSKDHELNLYEGDVEVDYRGEEVSVESFLRLLTGRTLPGPPPSKMLATNEHSNVLIYMNGHGGDQFLKFHDMEEVSSHDLGGALREMELKKRYHRVLFMVDTCQAMTLFDEITSPEVLCIGSSVRGENSYAKGSDTTIGLSLMDRFTSAMLDFFQAAMAKEDPSVTRVRQ 870
            G   + H NNWAVL                           VCTSRFWFNYRH+ANTLS+Y TV+RLGIPD  I+LMLADDM CNARN +PA V+N+++H++NLY  +VEVDYRG EV+VE+FLR+LTGR  P  P SK L ++E S++L+YM GHGGDQFLKF D EE+ SHDL  A+ +M  K+RY  +L MVDTCQA TL+ ++ SP VL IGSS++GENSY+   D+ +G+S++DRFT   L FF+     ++ S++ + Q
Sbjct:   30 GPAGTMHTNNWAVL---------------------------VCTSRFWFNYRHMANTLSLYRTVKRLGIPDERIILMLADDMACNARNSYPAQVFNNENHQINLYGDNVEVDYRGYEVTVENFLRVLTGRHDPAVPRSKRLLSDEGSHILLYMTGHGGDQFLKFQDSEEIQSHDLADAIEQMREKRRYKELLIMVDTCQAATLYSQLYSPGVLAIGSSLKGENSYSHHLDSDVGVSVVDRFTFYTLVFFERLDMYDNSSLSSLFQ 267          
BLAST of mRNA_A-nodosum_M_contig10078.4.1 vs. uniprot
Match: A0A2G5CZ09_AQUCA (Uncharacterized protein n=2 Tax=Mesangiospermae TaxID=1437183 RepID=A0A2G5CZ09_AQUCA)

HSP 1 Score: 276 bits (705), Expect = 1.540e-88
Identity = 137/263 (52.09%), Postives = 183/263 (69.58%), Query Frame = 1
Query:   73 VGDGASRHNNNWAVLAESGANSRDSSRFPRRLPFMYTANRHRVCTSRFWFNYRHVANTLSVYHTVRRLGIPDSNIVLMLADDMPCNARNPFPAGVYNSKDHELNLYEGDVEVDYRGEEVSVESFLRLLTGRTLPGPPPSKMLATNEHSNVLIYMNGHGGDQFLKFHDMEEVSSHDLGGALREMELKKRYHRVLFMVDTCQAMTLFDEITSPEVLCIGSSVRGENSYAKGSDTTIGLSLMDRFTSAMLDFFQAAMAKEDPSVTR 861
            + + ++ H NNWAVL                           VCTSRFWFNYRH+ANTLS+Y TV+RLGIPD  I+LMLADDM CN+RN +PA V+N+++H LNLY  +VEVDYRG EV+VE+FLR+LTGR     P SK L ++E S++L+YM GHGGD+FLKF D EE+ SHDL  A+++M+ K R+  +L MVDTCQA TLF+++ SP VL IGSS++GENSY+   D+ +G+S++DRFT   L FF+      + S++R
Sbjct:   37 ISNASTMHTNNWAVL---------------------------VCTSRFWFNYRHMANTLSLYRTVKRLGIPDERIILMLADDMACNSRNKYPAEVFNNENHRLNLYGDNVEVDYRGYEVTVENFLRVLTGRHENAVPRSKRLLSDEGSHILLYMTGHGGDEFLKFQDSEELQSHDLADAVKQMKEKLRFKELLIMVDTCQAATLFNQLHSPGVLAIGSSMKGENSYSHHLDSDVGVSVVDRFTFYTLAFFERLNTYSNASLSR 272          
BLAST of mRNA_A-nodosum_M_contig10078.4.1 vs. uniprot
Match: V4VSC2_CITCL (Uncharacterized protein n=5 Tax=Citrus TaxID=2706 RepID=V4VSC2_CITCL)

HSP 1 Score: 275 bits (704), Expect = 2.750e-88
Identity = 136/255 (53.33%), Postives = 180/255 (70.59%), Query Frame = 1
Query:   94 HNNNWAVLAESGANSRDSSRFPRRLPFMYTANRHRVCTSRFWFNYRHVANTLSVYHTVRRLGIPDSNIVLMLADDMPCNARNPFPAGVYNSKDHELNLYEGDVEVDYRGEEVSVESFLRLLTGRTLPGPPPSKMLATNEHSNVLIYMNGHGGDQFLKFHDMEEVSSHDLGGALREMELKKRYHRVLFMVDTCQAMTLFDEITSPEVLCIGSSVRGENSYAKGSDTTIGLSLMDRFTSAMLDFFQAAMAKEDPSVT 858
            H NNWAVL                           VCTSRFWFNYRH+ANTLS+Y TV+RLG+PD  I+LMLADDM CNARN +PA V+N+++H+LNLY  +VEVDYRG EV+VE+FLR+LTGR     P SK L ++E S++L+YM GHGGD+FLKF D EE+ SHDL  A+++M+ K+R+  +L MVDTCQA TLF ++ SP VL IGSS++GENSY+   D+ +G+S++DRFT   L FF+     ++ S++
Sbjct:   40 HTNNWAVL---------------------------VCTSRFWFNYRHMANTLSLYRTVKRLGVPDERIILMLADDMACNARNKYPAQVFNNENHKLNLYGDNVEVDYRGYEVTVENFLRVLTGRHEAAVPRSKHLLSDEGSHILLYMTGHGGDEFLKFQDSEELQSHDLADAVKQMKEKRRFKELLIMVDTCQAATLFSQLHSPGVLAIGSSMKGENSYSHHLDSDVGVSVVDRFTFYTLAFFEKLNMYDNASLS 267          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig10078.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FTP3_ECTSI6.960e-15273.27Putative GPI-anchor transamidase n=2 Tax=Ectocarpu... [more]
A0A7S2V326_9STRA1.300e-10061.11Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A804L7S9_MUSAM9.740e-9354.78Uncharacterized protein n=3 Tax=Musa TaxID=4640 Re... [more]
UPI001FB0F7233.280e-9154.21putative GPI-anchor transamidase n=2 Tax=Impatiens... [more]
A0A2P2JFN2_RHIMU7.050e-9053.73GPI-anchor transamidase family protein n=1 Tax=Rhi... [more]
UPI001C4BAFD52.750e-8950.17putative GPI-anchor transamidase n=2 Tax=Zingiber ... [more]
A0A7I8K0I5_SPIIN6.020e-8952.92Hypothetical protein n=2 Tax=Spirodela intermedia ... [more]
B8LLJ3_PICSI7.210e-8952.83Uncharacterized protein n=1 Tax=Picea sitchensis T... [more]
A0A2G5CZ09_AQUCA1.540e-8852.09Uncharacterized protein n=2 Tax=Mesangiospermae Ta... [more]
V4VSC2_CITCL2.750e-8853.33Uncharacterized protein n=5 Tax=Citrus TaxID=2706 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig10078contigA-nodosum_M_contig10078:12057..17120 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FTP3
Preferred namePIGK
PFAMsPeptidase_C13
Model size1027
Max annot lvl2759|Eukaryota
KEGG koko:K05290
KEGG Pathwayko00563,ko01100,map00563,map01100
Hectar predicted targeting categorymitochondrion
GOsGO:0003674,GO:0003756,GO:0003824,GO:0003923,GO:0004175,GO:0004197,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006464,GO:0006497,GO:0006505,GO:0006506,GO:0006508,GO:0006629,GO:0006643,GO:0006644,GO:0006650,GO:0006661,GO:0006664,GO:0006793,GO:0006796,GO:0006807,GO:0008104,GO:0008150,GO:0008152,GO:0008233,GO:0008234,GO:0008610,GO:0008654,GO:0009058,GO:0009059,GO:0009247,GO:0009987,GO:0012505,GO:0016020,GO:0016021,GO:0016255,GO:0016787,GO:0016853,GO:0016860,GO:0016864,GO:0019538,GO:0019637,GO:0030176,GO:0031224,GO:0031227,GO:0031984,GO:0032991,GO:0033036,GO:0034394,GO:0034613,GO:0034645,GO:0036211,GO:0042157,GO:0042158,GO:0042175,GO:0042765,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045017,GO:0046467,GO:0046474,GO:0046486,GO:0046488,GO:0051179,GO:0051641,GO:0070011,GO:0070727,GO:0071704,GO:0090407,GO:0098796,GO:0098827,GO:0140096,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1902494,GO:1903509
Exons7
Evalue1.01e-147
EggNOG OGsCOG5206@1|root,KOG1349@2759|Eukaryota
DescriptionGPI-anchor transamidase activity
Cds size798
COG categoryO
BRITEko00000,ko00001,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig10078.4.1prot_A-nodosum_M_contig10078.4.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig10078 12493..17065 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866364.6730814-UTR-A-nodosum_M_contig10078:12056..121731680866364.6730814-UTR-A-nodosum_M_contig10078:12056..12173Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig10078 12057..12173 +
1680866364.6853206-UTR-A-nodosum_M_contig10078:12435..124921680866364.6853206-UTR-A-nodosum_M_contig10078:12435..12492Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig10078 12436..12492 +
1680866364.772564-UTR-A-nodosum_M_contig10078:17065..171201680866364.772564-UTR-A-nodosum_M_contig10078:17065..17120Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig10078 17066..17120 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866364.6934478-CDS-A-nodosum_M_contig10078:12492..125161680866364.6934478-CDS-A-nodosum_M_contig10078:12492..12516Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig10078 12493..12516 +
1680866364.7135272-CDS-A-nodosum_M_contig10078:13400..136181680866364.7135272-CDS-A-nodosum_M_contig10078:13400..13618Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig10078 13401..13618 +
1680866364.7268229-CDS-A-nodosum_M_contig10078:14067..141431680866364.7268229-CDS-A-nodosum_M_contig10078:14067..14143Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig10078 14068..14143 +
1680866364.737456-CDS-A-nodosum_M_contig10078:14404..145571680866364.737456-CDS-A-nodosum_M_contig10078:14404..14557Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig10078 14405..14557 +
1680866364.7520082-CDS-A-nodosum_M_contig10078:15259..153731680866364.7520082-CDS-A-nodosum_M_contig10078:15259..15373Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig10078 15260..15373 +
1680866364.762701-CDS-A-nodosum_M_contig10078:16852..170651680866364.762701-CDS-A-nodosum_M_contig10078:16852..17065Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig10078 16853..17065 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig10078.4.1

>prot_A-nodosum_M_contig10078.4.1 ID=prot_A-nodosum_M_contig10078.4.1|Name=mRNA_A-nodosum_M_contig10078.4.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=266bp
MYTANRHRVCTSRFWFNYRHVANTLSVYHTVRRLGIPDSNIVLMLADDMP
CNARNPFPAGVYNSKDHELNLYEGDVEVDYRGEEVSVESFLRLLTGRTLP
GPPPSKMLATNEHSNVLIYMNGHGGDQFLKFHDMEEVSSHDLGGALREME
LKKRYHRVLFMVDTCQAMTLFDEITSPEVLCIGSSVRGENSYAKGSDTTI
GLSLMDRFTSAMLDFFQAAMAKEDPSVTRVRQFDGMAPVTLPDYVSQVCL
GNSCQPPTSSRRLAS*
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mRNA from alignment at A-nodosum_M_contig10078:12057..17120+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig10078.4.1 ID=mRNA_A-nodosum_M_contig10078.4.1|Name=mRNA_A-nodosum_M_contig10078.4.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=5064bp|location=Sequence derived from alignment at A-nodosum_M_contig10078:12057..17120+ (Ascophyllum nodosum dioecious)
TCCAGCGTCCTCCTTTTTCTGGGTTGTATTCCGTTAGTTGCTGCTCGGAT CATCCCCACCACCTGGGCCGGTGTGGGGGATGGTGCCTCTCGTCACAACA ACAATTGGGCTGTCCTGGTGAGGTTTTGCACTCGGCTGTTGGTGACTGTA TTACAGGCGGCCATACCGCAGGTACTAACAATACAACAGTATACCGGTAG TCACCACTTATCCAGTAGCAGAGTATAGATCAAGGGTGTAAGGTTGCCAA TTCTGCTCGTGGTCAGATGAACAGGGGAAAATGGCATTTCCCTGTCCCCG TTCGCGCCTGAGAAATTGGTCTCGCGAGACAGGTTCAGACGTTCCGTCCC GCGTCATCCTGCTCATTCTCCACACCCAGGCTGAATCTGGTGCTAACTCT CGGGATTCCTCCCGCTTTCCGCGGCGGCTTCCATTTATGTATACCGCCAA CCGCCATCGGGTCAGTACCGAGTTTATCAGGTCACGCAATTGCGTACCGA TAGCGTTCACGGCCGAGAGTCCGCCGGCACAATGTCAGTAGTCCTCAAGG TAGTTCCAGTACCGGGTGCTTCCTTTTCAAGCTTCACCATGGACCAACCA ATGTGCGCCTCTCTTTTCCCATACCCACTATTGGTATGTAATGGACATGT GTACTTCCTGCACGTACAGAGAGGTGAACAAAAATTGATTCCTCAGTGGG CAGCACCCGTTACTCGAGCTACTTTGAGGACCAATGGCCCTGTGCCGGCA AAATCTCGGCGGTAAACGCCATCGGTACGCACTAACGTGACCCGACAAAC TCGGGACTGACCCGATGGTGGGTGACGGTATGTGTGGATGCCGTCGCGGA AAGCGGGAGGAAGCACCAGATTGATGATTGATGATTGATGATTGATGATT CAGCCTGAGTGTGGAGAATGAGCGGGCTGACGCAGGACGGAACGGCTCAA CTTGTCTTACGAGGCCATATTCTCAGGCGTGAACGGGGACAGGGAAAAAA TGTATTTTCCCTGTTTAGCTGACCACGAGCAGGGTTGGCAGCCACACCCG GTTGATCTGATCCATACTCTGCTGCAAGTCCTGACCGTACATACATACAA TCTACTGTTGTAGGGAGTTCGATTCGGAAAGCTCGTACATCCGCCCCCCA TCCCCCTAAGACACAAAAAAAGTGGTCCACCAGATTCATCGTAATTTACT GCTGTAGATAATCTGCAATCTTCGACCACTTTTACACCATTCGTTACTAT TCAATCTTAAGAGCAGTGATACTACCGTGCCATTTTCTGTCTTTTTTGTT TTTTTTCTCATTGCACCAATGATCGATGATGACGGCGGCGGCAGGTGTGC ACCTCGCGCTTCTGGTTTAACTACCGCCACGTAGCCAACACCCTCTCGGT CTACCACACCGTCCGACGCCTGGGGATCCCGGACTCGAACATCGTCCTCA TGCTGGCGGACGACATGCCCTGCAATGCGCGAAACCCTTTCCCCGCCGGC GTCTACAACAGCAAGGACCACGAGCTGAATCTCTACGAGGGGGACGTGGA GGTCGACTACAGGTGCTGGACGCTTGAGCACGCGCGTGCGCGTGCCCTTC GCAGACCAGAAAAAGGTCGCGCGTTCTTAACCACTCGCCTCGCGCGCGTA TCGGGACTCAACGGTATCTTGCGGTCTGTAGCTTCGTACCAGTGCCTTGC CTCAAAGAGCTAAATAATATTTGCCAAGTGCCTCGTACGGTCGCCAAAAA ATGGCAAGACAGCTGGGCATGTGTCAAGGTTGCCCGCACTGGCGACCTCC CGCGCGTCTAGGCGAGCCAAACCATCTAAGGCCGCCGTTACGCGCTCTGT TTGTCCCCACCACAACTGTCCACTCAAAAGAGGGCACGCAGCGTGAAGTA CCGTACACTCCGGAGTACGATAAAAGGGACACCAGATCAGGCTGACTTAC GACAATCTGTATACCTACATGTGTTCTCTTGCACTTTATACCGCTTCTTT ATTTCCTCCAGGGGGGAGGAGGTTAGCGTGGAGAGCTTTTTGAGGCTGCT CACGGGAAGAACGCTGCCAGGACCCCCCCCCTCAAAGGTCGGTACGTGTT TCTGACACCTCACTTACGCCTCATTAAAACGTCAGAAACCTCTAACCTCT CAAGGGCGCACCCAGTTTCCCTGTCCGTTCGTTTCATTCTACTGTCACCG CCGCCCCCTTTTCTCTACTTATGGCGCTTGCTGGTGATGTTGATGTTGCC TATTTCTAGTTCTTCGCATCTCCGAGGTAATAGAATCCGCCAAATCTCTC GTCGCATATGCCTCCCCCCCCCTTCCCCCCCGATCCTTTACCAATCAGAT GCTCGCGACGAACGAGCACAGCAACGTGCTCATCTACATGAATGGGCACG GGGGGGATCAGTTCCTCAAGTTCCACGACATGGAAGAGGTGTCGAGCCAC GACCTTGGGGGTGCCCTGCGAGAGATGGAGCTCAAGAAGCGCTACCACAG AGTACACACATCACTCTCGTTTTTGTACTATGATAGACTTTGATGGAGAG GAAGAGGTGCCTCTCCTTAGAGGGAGAGATCTCTACTTAAAAACGGTTAT TTTACCGCGAACGACAGATACCAATGAAAAATATTATGTACACGTAGTAT ACTATATACTTTATACTGGTACTTGTCAATATCAATAGCAGGTCGATCAA CGGAGGCAGACAACGAGATTTGGTGGGTCAAGTGTTTGAAGATATAGATG GGGCTGCTCACCGCGCTCCGTTTTTTGGCTTCGCGCTCGAGAGCACATTG TTCCCGAGCGACTATTTTTGTAGAGAAACAGACTTTGATGGGAAAGACCT TAACTTTGAGGAAGAGGCGTTTGAAAAATCGACTAGCATCTCTCGAACGT ATATCGATTCTTCCCTTTGGCATTAGTTTGGTCAAGTGTTTGAAGTTGCG CTCAGGTAGCTTCGCAGGGACTAGAACCGTTAAACTGGGACCTGGCCATT CCGGGGGAAAAGGCGATCACATCCCGCGCCTCAGGGCCAATAGCAGGTCG ATCTTGTCAACGGAGGCAGACAACGAGAGGGTCACCCCTACAACTTTTAC CGTCATCCTTCGTTCTCTCCCGTTGCCCGCGGCCGTGGGATCTCGGTGTT GCCCACCTCGGGATGGGGCGATGCTCGCCCATGTTTGTGTGGTAAAAAAG CAGGTGCTATTCATGGTGGACACCTGCCAGGCCATGACGCTGTTCGATGA GATCACCTCGCCCGAGGTGCTGTGCATCGGCAGCAGCGTCCGCGGGGAAA ACTCTTACGCGAAGGGGGTGAGAAGACCGCAATAAACTCACCAcCCGAGT TTTCCTGTTTTTTTTttgTGTGTGTGTGTGTGTGTGTTTGATTTTTGTTG TTTTGTGTGATTTGTGCTGAGGCGGGCACCGACTCTCCTGCCGTGGTCAG AACGAAACGAGCTCGAGAAAGGAAAACCCTCGTTGGCGAGGAGTGAGAGG TATAATATCCCAAAGCGTTATCTACCGTGCTCTCGAAGAACTCAAAGTGT CCATTGTGTTGACTCGACGCAAGGAGGGCCTCTTCTCTAGTTTGAGCGAT GGCCGAGGCAATGAGTAATGTCCCTTCCATGTTTCACGTGTTGTGTTTTG TATTTTGGGCCGGGAACCATTTCCAGTATTATTACAGTATTATTATTACG GTATTGTTACGGTATTGTTATAGTATTATTATTACGGTATTGTTACGGTA TTATTATTACGGTATTATTACAGTATTATGACAGTATTGTTACGGTATTA TCACAGTATTATTACGGTATTGTTACAGTATTGTTACAGTACTATCACCT TCTCTACCCGTTTTTTCCTAACGGTTTAGCTACTGTAACCATATACGCCA TTGATTGTTACAGTAGCTTAACACCCCACGCCGTCTTACGATAAAATTAG ACCCCGAACGGCCGAAAGAGAATGCTAACAAAACAGTGCCAGGGCGATTT GTTTTAGAGCTATTATAGCTACGTGTGTGACTCCGGCGGAAAACGAGGCT ACGCCGTCGTGGTTTGGTCTCGGGGTACCTTCTCCAGTATACCTTCTCTA TTATACCTTCTCCAGTATAGCAAGCGCAAACAAGGCCTCGGCACAGCTGC ATTTACCGGTGTCATCTCTAACGGCATTTTTTCCTTACTTGTCTTATTTC TGACGATGGAGCCACTGGATGTATGTATGTATGTTCATCACATATAGCAA GAGTATCGATCAACCGGGTAAGGTTGCCAATCCTGCTCGTGGTCAGCTGA ACAGGGAAAATGTTTTTTTCCCTGGCCCCGTTCGCGCCTGAGAACTTGGT CTCGCGAGACGGTTTCGGCAGTCCCGTCCCGCGTCAGCCTGCTCATCTCC ATACTCAGGCTGAATCTGATGCTTACTCACGGGATTTCTCCCGAGTTCCG CGGCGGCGTCCATTTATGAAACCGCCATACCCCATCGGGTCAGTCCCGAC TTTATCGGGTCACGCAATCGCGTACCGACGGCCTTCACTGCCGAGAGTCC GCCGGCGTAGAGCCAGTAAACCTCAAGGTAGTTAGTTCCGAACGAGTAGT GCTGCCTTGGCAGGTCACCATGGACCAATTTGTATGCGCCTCTCTTTCCC ACACCCACTGATGGTATGAAGTGGTTATAGCATGTTGAAAGTACCGGCGA TGTACTTGCTCGGTTGCCACCCTCCCCTGCTGCGAtgcTGCCCCCTCAAA TGCGCCTGCCTGTGCTCTTTTGGCGCCCGCTGGGACATCCTTCCAGAGCG ACACGACCATCGGACTGTCGCTGATGGACCGCTTCACGTCAGCCATGCTG GACTTCTTCCAGGCTGCTATGGCTAAAGAGGACCCGTCCGTCACCAGAGT TCGCCAGTTTGACGGCATGGCGCCCGTCACGTTGCCAGATTACGTAAGTC AAGTCTGCCTGGGGAACAGCTGCCAGCCGCCAACCTCCAGCCGGCGGCTG GCGTCTTGACCGGTAACGCCTTATGTTGTCTGCCGTTTCAACGACTTCGA TGAAGCCAGATCCC
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Coding sequence (CDS) from alignment at A-nodosum_M_contig10078:12057..17120+

>mRNA_A-nodosum_M_contig10078.4.1 ID=mRNA_A-nodosum_M_contig10078.4.1|Name=mRNA_A-nodosum_M_contig10078.4.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=798bp|location=Sequence derived from alignment at A-nodosum_M_contig10078:12057..17120+ (Ascophyllum nodosum dioecious)
ATGTATACCGCCAACCGCCATCGGGTGTGCACCTCGCGCTTCTGGTTTAA
CTACCGCCACGTAGCCAACACCCTCTCGGTCTACCACACCGTCCGACGCC
TGGGGATCCCGGACTCGAACATCGTCCTCATGCTGGCGGACGACATGCCC
TGCAATGCGCGAAACCCTTTCCCCGCCGGCGTCTACAACAGCAAGGACCA
CGAGCTGAATCTCTACGAGGGGGACGTGGAGGTCGACTACAGGGGGGAGG
AGGTTAGCGTGGAGAGCTTTTTGAGGCTGCTCACGGGAAGAACGCTGCCA
GGACCCCCCCCCTCAAAGATGCTCGCGACGAACGAGCACAGCAACGTGCT
CATCTACATGAATGGGCACGGGGGGGATCAGTTCCTCAAGTTCCACGACA
TGGAAGAGGTGTCGAGCCACGACCTTGGGGGTGCCCTGCGAGAGATGGAG
CTCAAGAAGCGCTACCACAGAGTGCTATTCATGGTGGACACCTGCCAGGC
CATGACGCTGTTCGATGAGATCACCTCGCCCGAGGTGCTGTGCATCGGCA
GCAGCGTCCGCGGGGAAAACTCTTACGCGAAGGGGAGCGACACGACCATC
GGACTGTCGCTGATGGACCGCTTCACGTCAGCCATGCTGGACTTCTTCCA
GGCTGCTATGGCTAAAGAGGACCCGTCCGTCACCAGAGTTCGCCAGTTTG
ACGGCATGGCGCCCGTCACGTTGCCAGATTACGTAAGTCAAGTCTGCCTG
GGGAACAGCTGCCAGCCGCCAACCTCCAGCCGGCGGCTGGCGTCTTGA
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