mRNA_A-nodosum_M_contig10054.3.1 (mRNA) Ascophyllum nodosum dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_A-nodosum_M_contig10054.3.1 vs. uniprot
Match: A0A6H5KKF7_9PHAE (C2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKF7_9PHAE) HSP 1 Score: 437 bits (1125), Expect = 6.020e-143 Identity = 223/312 (71.47%), Postives = 254/312 (81.41%), Query Frame = 3 Query: 3 AMQKRRKGMDEGAQHLRSMLSDHLGPDFVQVVSRRRMQMRVKLYLRRSLLNVYGEIDGECASKNTGIAKIVANKGGLVCKLRLRGTTLCFVSCHLQAHEGQNHLARRNASCAEILQGARLGERPSVDLDMQFHHVFWFGDLNYRVNFHLPHE-KQQSSLVSSLVNAKNWPILWEGDELLRELKAGHLLAGFKTEPPAFAPTFKTIRGERDGYHPKRVPSFTDRILWKSLPGHAPNLELQNFASFPEITSSDHKPVHATFTVKLTPEFVAPSPEGSKRNRRRTRTP-AVLEVPRMEQPPPVRLVFEDLEATGL 932 A++KR K MD GA HLRSMLS HLGPDF QV+S RRMQMRVK++LRRSLL+VY +GE A++NTGI K+VANKGGLVCKLRLRGTTLCFVSCHLQAHEGQNHLARRN+SCAEILQGARLG+R VD+D QFHHVFW GD+NYR+N L + ++Q + VS+LV A +WP LWE DELL+EL+AG LLAGF+TEPPAF PTFK IRGE GY KR+PS+TDRILWKSLPGHA NL L F SFPEITSSDHKP+HA F VKL+PE AP P SK RR+R P AVL+V RM QPPP RL+ EDLE L Sbjct: 60 AVKKRTKEMDAGAAHLRSMLSGHLGPDFEQVISLRRMQMRVKIFLRRSLLDVYDHEEGESAAENTGIGKVVANKGGLVCKLRLRGTTLCFVSCHLQAHEGQNHLARRNSSCAEILQGARLGDRRMVDVDSQFHHVFWLGDMNYRINLGLGLQPEEQHARVSALVEASDWPKLWEADELLKELRAGRLLAGFQTEPPAFPPTFKGIRGETGGYSAKRIPSYTDRILWKSLPGHAANLNLLKFTSFPEITSSDHKPIHAAFVVKLSPEVGAPPPP-SKMFGRRSRMPLAVLDVSRMAQPPPPRLLLEDLEVFDL 370
BLAST of mRNA_A-nodosum_M_contig10054.3.1 vs. uniprot
Match: D8LK92_ECTSI (C2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK92_ECTSI) HSP 1 Score: 407 bits (1047), Expect = 2.410e-132 Identity = 213/312 (68.27%), Postives = 244/312 (78.21%), Query Frame = 3 Query: 3 AMQKRRKGMDEGAQHLRSMLSDHLGPDFVQVVSRRRMQMRVKLYLRRSLLNVYGEIDGECASKNTGIAKIVANKGGLVCKLRLRGTTLCFVSCHLQAHEGQNHLARRNASCAEILQGARLGERPSVDLDMQFHHVFWFGDLNYRVNFHLPHE-KQQSSLVSSLVNAKNWPILWEGDELLRELKAGHLLAGFKTEPPAFAPTFKTIRGERDGYHPKRVPSFTDRILWKSLPGHAPNLELQNFASFPEITSSDHKPVHATFTVKLTPEFVAPSPEGSKRNRRRTRTP-AVLEVPRMEQPPPVRLVFEDLEATGL 932 A++KR K MD GA HLRSMLS HLGPDF QV+S RRMQMRVK++LRRSLL+VY +GE A++NTGI K+VANKGGLVCKLRLRGTTLCFVSCHLQAHEGQNHLARRN+SCAEILQGARLG+R VD+D QFHHVFW GD+NYR+N L + ++Q + VS+LV A +WP LWE DELL+EL+AG LLAGF+ IRGE GY KR+PS+TDRILWKSLPGHA NL+L F SFPEITSSDHKP+HA F VKLTPE AP P +K RR R P AVL+VPRM Q PP RL+ EDLE L Sbjct: 119 AVKKRTKEMDAGAAHLRSMLSGHLGPDFEQVISLRRMQMRVKIFLRRSLLDVYDHEEGESAAENTGIGKVVANKGGLVCKLRLRGTTLCFVSCHLQAHEGQNHLARRNSSCAEILQGARLGDRRMVDVDSQFHHVFWLGDMNYRINLGLGLQPEEQHARVSALVEASDWPRLWEADELLKELRAGRLLAGFQG-----------IRGETSGYSAKRIPSYTDRILWKSLPGHAANLDLLKFTSFPEITSSDHKPIHAAFVVKLTPEVGAP-PLPNKMFGRRARMPLAVLDVPRMAQHPPPRLLLEDLEVFDL 418
BLAST of mRNA_A-nodosum_M_contig10054.3.1 vs. uniprot
Match: A0A6T5RE32_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5RE32_HETAK) HSP 1 Score: 228 bits (580), Expect = 1.690e-66 Identity = 126/271 (46.49%), Postives = 164/271 (60.52%), Query Frame = 3 Query: 33 EGAQHLRSMLSDHLGPDFVQVVSRRRMQMRVKLYLRRSLLNVYGEIDGECASKNTGIAKIVANKGGLVCKLRLRGTTLCFVSCHLQAHEGQNHLARRNASCAEILQGARLGERPS-VDLDMQFHHVFWFGDLNYRVNFHLP--HEKQQSSLVSSLVN-------AKNWPILWEGDELLRELKAGHLLAGFKTEPPAFAPTFKTIRGERDGYHPKRVPSFTDRILWKSLPGHAPNLELQNFASFPEITSSDHKPVHATFTVKLTPEFVAPSP 815 E + + M +DHLGPDFV + S +R M++++Y+R L ++ E ++NTGI I+ANKGG C L LRGT+L FVSCHL A+EG+ L RNA C EI+ G LG P +DL HHVFW GDLNYRV+ P H K+ + +LV A ++ L DELLREL AG +LAGF+T PP F PTFK G+ Y KRVPS+ DR+LWKSLPG + + + + SSDHKP+ ATF+V TP V +P Sbjct: 142 ESEERVEQMFADHLGPDFVLISSSKRGFMQLRIYVRAELAPEVTDL--EVGAENTGIGGIIANKGGQACALTLRGTSLVFVSCHLAANEGKKELQHRNADCQEIIGGVHLGPFPQQLDLTHAAHHVFWMGDLNYRVDLAHPAAHPKRGTPAFQALVEEVKARAAAADYAPLHAADELLRELAAGRVLAGFRTLPPQFPPTFKVEPGQELAYKDKRVPSYCDRVLWKSLPGLEGRVRPYLYQACTGVLSSDHKPIRATFSVAPTPAVVPRAP 410
BLAST of mRNA_A-nodosum_M_contig10054.3.1 vs. uniprot
Match: A0A024UUY2_9STRA (C2 domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UUY2_9STRA) HSP 1 Score: 203 bits (517), Expect = 3.350e-57 Identity = 109/260 (41.92%), Postives = 158/260 (60.77%), Query Frame = 3 Query: 60 LSDHLGPDFVQVVSRRRMQMRVKLYLRRSLLNVYGEIDGECASKNTGIAKIVANKGGLVCKLRLRGTTLCFVSCHLQAHEGQNHLARRNASCAEILQGARLGERPSVDLDMQFHHVFWFGDLNYRVNFHLPHEKQQS-----SLVSSLVNAKNWPILWEGDELLRELKAGHLLAGFKTEPPAFAPTFKTIRGERDGYHPKRVPSFTDRILWKSLPGHAPNLELQNFASFPEITSSDHKPVHATFTVKLTPEFVAPSPEGS 824 L +HLGPD+ + M++R+ +++ N + E ++ TG+ ++ NKGG+V K+ + + CFV+CHL AHE L RRN AEIL GAR+G+R S++LD QF H FWFGD+NYRV K ++ + V +LV K + L+ D+L ++ A +LAG+ T P F PTFK +RG+ D + +RVPS+ DR+LWKSLPG A NL L+ + +I++SDHKPV ATF V+ P PSP + Sbjct: 187 LLEHLGPDYTVAGAVELMEIRLAVFVHTR--NTVSSV--EKVTEATGVGNVIGNKGGVVLKMVVDHRSFCFVNCHLAAHEAAKFLERRNNDVAEILSGARVGQR-SIELDHQFDHAFWFGDMNYRVQLAYTDPKDKTKEEHWTAVHALVKGKEYSKLYANDQLQHQMHANKVLAGWHTAPCNFPPTFKRLRGKVDEFTQQRVPSYCDRVLWKSLPGFAANLTLKEYNCVEDISTSDHKPVFATFDVRPLP---TPSPNSN 438
BLAST of mRNA_A-nodosum_M_contig10054.3.1 vs. uniprot
Match: A0A6G0WJN4_9STRA (C2 domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WJN4_9STRA) HSP 1 Score: 205 bits (522), Expect = 7.560e-57 Identity = 108/250 (43.20%), Postives = 154/250 (61.60%), Query Frame = 3 Query: 60 LSDHLGPDFVQVVSRRRMQMRVKLYLRRSLLNVYGEIDGECASKNTGIAKIVANKGGLVCKLRLRGTTLCFVSCHLQAHEGQNHLARRNASCAEILQGARLGERPSVDLDMQFHHVFWFGDLNYRVNFHLPHEKQQS-----SLVSSLVNAKNWPILWEGDELLRELKAGHLLAGFKTEPPAFAPTFKTIRGERDGYHPKRVPSFTDRILWKSLPGHAPNLELQNFASFPEITSSDHKPVHATFTVKLTP 794 L +HLG + S M++R+ +++ + D E ++ TG+ ++ NKGG+V KL + + CFV+CHL AHE Q L RRN AEIL GARLG++ S++LD QF H FWFGD+NYRVN K+ S + V SLV AK + L+E D+L ++ A +LAG+ T P F PTFK +RG+ D Y +RVPS+ DR+LWKSLPG +L+L + +I +SDHKP+ A+F ++ P Sbjct: 127 LQEHLGSHYHMAGSVELMEIRLVVFVHTQ----HHVSDVEKITEATGVGNVIGNKGGVVLKLHVNTRSFCFVNCHLAAHEAQKFLERRNNDVAEILNGARLGQK-SIELDHQFDHAFWFGDMNYRVNLGYSDPKEMSKEEHWAAVHSLVAAKEYNKLYENDQLQHQMHANKVLAGWTTSPCNFPPTFKRLRGKTDEYTKQRVPSYCDRVLWKSLPGFEKHLKLIEYKCVQDICTSDHKPIFASFELEPLP 371
BLAST of mRNA_A-nodosum_M_contig10054.3.1 vs. uniprot
Match: A0A485L4S4_9STRA (Aste57867_15572 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L4S4_9STRA) HSP 1 Score: 201 bits (510), Expect = 3.730e-56 Identity = 108/266 (40.60%), Postives = 161/266 (60.53%), Query Frame = 3 Query: 54 SMLSDHLGPDFVQVVSRRRMQMRVKLYLR-RSLLNVYGEIDGECASKNTGIAKIVANK-----------------GGLVCKLRLRGTTLCFVSCHLQAHEGQNHLARRNASCAEILQGARLGERPSVDLDMQFHHVFWFGDLNYRVNFHLPHEKQQS-----SLVSSLVNAKNWPILWEGDELLRELKAGHLLAGFKTEPPAFAPTFKTIRGERDGYHPKRVPSFTDRILWKSLPGHAPNLELQNFASFPEITSSDHKPVHATFTV 782 + L++HLG +++Q+ + M++R+ +Y+ R+ ++ D E ++ TG+ ++ NK GG V K+ + + CFV+CHL AHE Q L RRN+ AEIL GAR+G++ SV+LD QF H FWFGD+NYR++ K+ S S V +LV AK++ L+E D+L ++ A +L+G+ T P F PTFK +RG+ D + +R PS+ DR+LWKSLPG NL L + P IT+SDHKPV A+F V Sbjct: 167 TQLAEHLGSNYMQIGAVELMEIRLAVYVHTRNEAGIHRFSDVEKVTEATGVGNVIGNKVRYTMISLGIMTSVALQGGAVLKVVVNQRSFCFVNCHLAAHEAQKFLERRNSDVAEILNGARVGQK-SVELDHQFDHAFWFGDMNYRISLGYTDPKEMSKEDHWSAVHALVQAKDYGKLFENDQLQHQMHANKVLSGWTTIPCNFPPTFKRLRGKTDEFTKQRTPSWCDRVLWKSLPGFEKNLRLIEYNCVPSITTSDHKPVFASFEV 431
BLAST of mRNA_A-nodosum_M_contig10054.3.1 vs. uniprot
Match: A0A1V9ZWR6_9STRA (Phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZWR6_9STRA) HSP 1 Score: 199 bits (506), Expect = 5.080e-56 Identity = 111/265 (41.89%), Postives = 154/265 (58.11%), Query Frame = 3 Query: 60 LSDHLGPDFVQVVSRRRMQMRVKLYLRRSLLNVYGEIDGECASKNTGIAKIVANKGGLVCKLRLRGTTLCFVSCHLQAHEGQNHLARRNASCAEILQGARLGERPSVDLDMQFHHVFWFGDLNYRVNFHLPHEKQQS-------SLVSSLVNAKNWPILWEGDELLRELKAGHLLAGFKTEPPAFAPTFKTIRGERDGYHPKRVPSFTDRILWKSLPGHAPNLELQNFASFPEITSSDHKPVHATFTVKLTPEFVAPSPEGSKRN 833 L +H G D+V M++R+ +++ N + D E ++ TG+ ++ NKGG V KL + G +LCFV+CHL AHE Q L RRN+ CAEIL GAR+G R S+ LD QF HVFWFGD+NYRVN + + V +LV + + L+ D+L +L LAG+ T P F PTFK IRG++ + +RVPS+ DRILWKSLPG+A NL+L + I +SDHKP+ F + P P+ + RN Sbjct: 128 LEEHFGQDYVIAGHVDLMEIRLIVFVH----NRHEFTDVEKITEATGVGNVIGNKGGTVLKLVVDGISLCFVNCHLAAHESQKFLDRRNSDCAEILNGARVG-RKSLSLDHQFDHVFWFGDMNYRVNLAYSNGSNEEMTKEAHWEAVHALVEQEGYATLYANDQLQHQLDQQKALAGWTTVPCNFPPTFKRIRGQQHEFTKQRVPSYCDRILWKSLPGYAKNLKLLKYECVEAICTSDHKPILGAFEIAR----YTPGPKTALRN 383
BLAST of mRNA_A-nodosum_M_contig10054.3.1 vs. uniprot
Match: W4GL87_9STRA (C2 domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GL87_9STRA) HSP 1 Score: 200 bits (509), Expect = 5.480e-56 Identity = 107/260 (41.15%), Postives = 158/260 (60.77%), Query Frame = 3 Query: 60 LSDHLGPDFVQVVSRRRMQMRVKLYLRRSLLNVYGEIDGECASKNTGIAKIVANKGGLVCKLRLRGTTLCFVSCHLQAHEGQNHLARRNASCAEILQGARLGERPSVDLDMQFHHVFWFGDLNYRVNFHLPHEKQQS-----SLVSSLVNAKNWPILWEGDELLRELKAGHLLAGFKTEPPAFAPTFKTIRGERDGYHPKRVPSFTDRILWKSLPGHAPNLELQNFASFPEITSSDHKPVHATFTVKLTPEFVAPSPEGS 824 L +HLG D++ + M++R+ +++ N ++ E ++ TG+ ++ NKGG+V KL + + CFV+CHL AHE Q L RRN+ +EIL GAR+G+R ++LD QF H FW GD+NYRV+ K + + V LV K + L+ D+L ++ A +LAG+ T P FAPTFK +RG+ + +RVPS+ DR+LWKSLPG NL L + P+I++SDHKPV+A F V+ P PSP+ S Sbjct: 194 LLEHLGADYMVAGAVELMEIRLAVFVHTR--NAVSDV--EKITEATGVGNVIGNKGGVVVKLVVDQRSFCFVNCHLAAHEAQKFLERRNSDVSEILSGARVGQR-GIELDHQFDHAFWMGDMNYRVHLGYTDPKDMTKEEHWAAVHDLVTRKEYGKLYANDQLQHQMHANKVLAGWHTVPCEFAPTFKRLRGKEHEFTQQRVPSYCDRVLWKSLPGFESNLTLTAYTCVPDISTSDHKPVYAAFDVRPLP---TPSPDTS 445
BLAST of mRNA_A-nodosum_M_contig10054.3.1 vs. uniprot
Match: A0A1V9ZKW6_9STRA (Phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZKW6_9STRA) HSP 1 Score: 198 bits (503), Expect = 2.940e-55 Identity = 105/246 (42.68%), Postives = 147/246 (59.76%), Query Frame = 3 Query: 60 LSDHLGPDFVQVVSRRRMQMRVKLYLRRSLLNVYGEIDGECASKNTGIAKIVANKGGLVCKLRLRGTTLCFVSCHLQAHEGQNHLARRNASCAEILQGARLGERPSVDLDMQFHHVFWFGDLNYRVNFHLPH-----EKQQSSLVSSLVNAKNWPILWEGDELLRELKAGHLLAGFKTEPPAFAPTFKTIRGERDGYHPKRVPSFTDRILWKSLPGHAPNLELQNFASFPEITSSDHKPVHATFTV 782 L H+GP +V S M++R+ +++ D E ++ TG+ ++ NKGG V KL + G +LCFV+CHL AHE Q L RRN+ CAEIL GAR+G + S+ +D QF H FWFGD+NYR+N + V +LV AK++ L+ D+L +L G LAG+ T P F PTFK +RG + +RVPS+ DRILW SLPG+A +L+L +A I++SDHKPV F + Sbjct: 172 LEHHVGPSYVVAGSVELMEIRLIVFVHER----NAVTDVEKTTEATGVGNVIGNKGGAVLKLTVDGLSLCFVNCHLAAHEAQKFLDRRNSDCAEILNGARVGLK-SLSIDHQFDHAFWFGDMNYRINLEYGGGDALAKDAHWDAVHALVMAKDFATLYANDQLQHQLAEGKALAGWSTAPCDFPPTFKRVRGRETEFTRQRVPSYCDRILWTSLPGYASHLKLLKYACVETISTSDHKPVFGAFEL 412
BLAST of mRNA_A-nodosum_M_contig10054.3.1 vs. uniprot
Match: A0A8K1CJL7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CJL7_PYTOL) HSP 1 Score: 197 bits (501), Expect = 8.700e-55 Identity = 111/263 (42.21%), Postives = 155/263 (58.94%), Query Frame = 3 Query: 60 LSDHLGPDFVQVVSRRRMQMRVKLYLRRSLLNVYGEIDGECASKNTGIAKIVANKGGLVCKLRLRGTTLCFVSCHLQAHEGQNHLARRNASCAEILQGARLGERPSVDLDMQFHHVFWFGDLNYRVNFHLPHEKQQSSL-----VSSLVNAKNWPILWEGDELLRELKAGHLLAGFKTEPPAFAPTFKTIRGERDGYHPKRVPSFTDRILWKSLPGHAPNLELQNFASFPEITSSDHKPVHATFTVKLTPEFVAPSPEGSKRN 833 L+ HLG +V V ++MR+ +++ S V G E S TG+ ++ NKGGL+ KL L T+LCFVSCHL AH+ Q L +RNA C IL A LG + +D QF H FWFGDLNYRV+ + K ++ V +LV AK W +L D+L +++ L G++ P F PTFK +R D Y+P+RVPS+ DR+L+KSLPG +L+L F S I++SDHKPV A+F + TP +P G+ R+ Sbjct: 186 LTQHLGEQYVLVAKVELLEMRLLVFVH-SKHRVSGI---EKHSIATGLGSVIGNKGGLILKLVLHNTSLCFVSCHLAAHQDQKFLDKRNADCTSILH-ASLGLHKHLQMDHQFDHCFWFGDLNYRVDLNYTQPKNRTHDEHVHDVRALVRAKKWTVLNANDQLQHQIEQHKTLFGWELPPALFPPTFKRVRATTDQYNPQRVPSYCDRVLYKSLPGLRSSLKLLEFQSVDSISTSDHKPVRASFQLMTTPRITV-TPMGALRD 442 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig10054.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig10054.3.1 >prot_A-nodosum_M_contig10054.3.1 ID=prot_A-nodosum_M_contig10054.3.1|Name=mRNA_A-nodosum_M_contig10054.3.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=313bp MQKRRKGMDEGAQHLRSMLSDHLGPDFVQVVSRRRMQMRVKLYLRRSLLNback to top mRNA from alignment at A-nodosum_M_contig10054:11280..17076- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig10054.3.1 ID=mRNA_A-nodosum_M_contig10054.3.1|Name=mRNA_A-nodosum_M_contig10054.3.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=5797bp|location=Sequence derived from alignment at A-nodosum_M_contig10054:11280..17076- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig10054:11280..17076- >mRNA_A-nodosum_M_contig10054.3.1 ID=mRNA_A-nodosum_M_contig10054.3.1|Name=mRNA_A-nodosum_M_contig10054.3.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=939bp|location=Sequence derived from alignment at A-nodosum_M_contig10054:11280..17076- (Ascophyllum nodosum dioecious)back to top |