mRNA_A-nodosum_M_contig10021.1.1 (mRNA) Ascophyllum nodosum dioecious
Overview
Homology
BLAST of mRNA_A-nodosum_M_contig10021.1.1 vs. uniprot
Match: A0A6H5L3L5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3L5_9PHAE) HSP 1 Score: 221 bits (562), Expect = 5.110e-68 Identity = 118/197 (59.90%), Postives = 141/197 (71.57%), Query Frame = 1 Query: 1 WLDLFLRRHPRLSERSCRIYEANRITADDEPRLKSFYANCKELITRLQPQPDHIWNTDETGALTVEPAQ-RVIAERGQKVVGTKRSNSRENTTVVATINAAGTATPPLIIFKGQRVQAARL-GNGGPPGSKFAATDSSFMQGAVFVNYITDFHNFIVENGLADGKPHTLVLDGHASHVNLDVIQLAMTLNIELFQLP 585 WLD F +RHP LSERS RIYEANRI +DDE RL++FY + E + + + DH+WNT E AL P Q +VIAE GQKVVG RSNSREN TVV TI+AAG II+KGQR+QA R+ G GPP ++ A TDSS MQG VFVNYI DFH +++ GL +G PH LVLDGHASHV V++LA LNI L+QLP Sbjct: 158 WLDGFFKRHPALSERSARIYEANRIMSDDETRLQTFYKDFGEFVDKEKIPADHLWNTGEV-ALHRAPRQWKVIAESGQKVVGAMRSNSRENVTVVVTISAAGATLATWIIYKGQRLQADRVKGRNGPPNARLAVTDSSVMQGTVFVNYIRDFHRQLLDRGLINGTPHVLVLDGHASHVTYKVVKLARDLNIVLYQLP 353
BLAST of mRNA_A-nodosum_M_contig10021.1.1 vs. uniprot
Match: A0A6H5L5E2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5E2_9PHAE) HSP 1 Score: 223 bits (567), Expect = 5.490e-68 Identity = 114/197 (57.87%), Postives = 141/197 (71.57%), Query Frame = 1 Query: 1 WLDLFLRRHPRLSERSCRIYEANRITADDEPRLKSFYANCKELITRLQPQPDHIWNTDETGALTV-EPAQRVIAERGQKVVGTKRSNSRENTTVVATINAAGTATPPLIIFKGQRVQAARL-GNGGPPGSKFAATDSSFMQGAVFVNYITDFHNFIVENGLADGKPHTLVLDGHASHVNLDVIQLAMTLNIELFQLP 585 WLD F +RHP LSERS RIYEANRI +DDE RL++FY + E + + + DH+WNTDETG+ + +VI E GQKV G RSNSREN TVV TI+AAG P II+KGQR+QA + G GPP ++ A DSSFMQG VFVNYI DFH +++ GL +G PH LVLDGHASHV +V++LA LNI L+Q+P Sbjct: 112 WLDGFFKRHPALSERSARIYEANRIMSDDETRLQTFYKDFGEFVDKEKIPADHLWNTDETGSTSQGTKTMKVITESGQKVGGAMRSNSRENVTVVVTISAAGATLAPWIIYKGQRLQADWVKGRNGPPNARLAVIDSSFMQGTVFVNYIRDFHRQLLDRGLINGTPHVLVLDGHASHVTYEVVKLARDLNIVLYQIP 308
BLAST of mRNA_A-nodosum_M_contig10021.1.1 vs. uniprot
Match: B2KWI5_ECTSI (Transposase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=B2KWI5_ECTSI) HSP 1 Score: 226 bits (575), Expect = 8.580e-67 Identity = 116/197 (58.88%), Postives = 142/197 (72.08%), Query Frame = 1 Query: 1 WLDLFLRRHPRLSERSCRIYEANRITADDEPRLKSFYANCKELITRLQPQPDHIWNTDETGALTV-EPAQRVIAERGQKVVGTKRSNSRENTTVVATINAAGTATPPLIIFKGQRVQAARL-GNGGPPGSKFAATDSSFMQGAVFVNYITDFHNFIVENGLADGKPHTLVLDGHASHVNLDVIQLAMTLNIELFQLP 585 WLD F +RHP LSERS RIYEANRI +DDE RL++FY + E + + + DH+WNTDETG+ + + IAE GQKVVG RSNSRE TVV TI+AAG P II+KGQR+QA + G GPP ++ A TDSSFMQG VFVNYI DFH +++ GL +G PH LVLDGHASHV +VI+LA LNI L+Q+P Sbjct: 112 WLDGFFKRHPALSERSARIYEANRIMSDDETRLQTFYKDFGEFVDKEKIPADHLWNTDETGSTSQGTKTMKAIAESGQKVVGAMRSNSRETVTVVVTISAAGATLAPWIIYKGQRLQADWVKGRNGPPNARLAVTDSSFMQGTVFVNYIRDFHRQLLDRGLINGTPHVLVLDGHASHVTYEVIKLARDLNIVLYQIP 308
BLAST of mRNA_A-nodosum_M_contig10021.1.1 vs. uniprot
Match: A0A6H5JFM5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFM5_9PHAE) HSP 1 Score: 218 bits (554), Expect = 1.610e-65 Identity = 114/197 (57.87%), Postives = 140/197 (71.07%), Query Frame = 1 Query: 1 WLDLFLRRHPRLSERSCRIYEANRITADDEPRLKSFYANCKELITRLQPQPDHIWNTDETGALTV-EPAQRVIAERGQKVVGTKRSNSRENTTVVATINAAGTATPPLIIFKGQRVQA-ARLGNGGPPGSKFAATDSSFMQGAVFVNYITDFHNFIVENGLADGKPHTLVLDGHASHVNLDVIQLAMTLNIELFQLP 585 WL F RRHPR++ERS RIYEANRIT D+EPR+ FY L+ +P+ +H+ NTDETG + AE GQKVVG+ R+NSRENTTVVATI+A G P IIFKGQR+QA + GP G++ TDSSFMQG VF+NY+ DFH + + GL DGKPH L+LDGHASHV+++VI+LAM L I LFQLP Sbjct: 111 WLAGFRRRHPRVAERSTRIYEANRITEDEEPRMVQFYERWAALLDEFKPEANHVHNTDETGTTPQGTKTTKAFAESGQKVVGSMRANSRENTTVVATISADGHTWAPTIIFKGQRLQADCFVERNGPEGARHTCTDSSFMQGDVFMNYLKDFHKQLGDRGLLDGKPHILLLDGHASHVSVEVIKLAMNLKIILFQLP 307
BLAST of mRNA_A-nodosum_M_contig10021.1.1 vs. uniprot
Match: A0A6H5KJ62_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ62_9PHAE) HSP 1 Score: 207 bits (526), Expect = 7.060e-63 Identity = 110/197 (55.84%), Postives = 136/197 (69.04%), Query Frame = 1 Query: 1 WLDLFLRRHPRLSERSCRIYEANRITADDEPRLKSFYANCKELITRLQPQPDHIWNTDETGALTV-EPAQRVIAERGQKVVGTKRSNSRENTTVVATINAAGTATPPLIIFKGQRVQAAR-LGNGGPPGSKFAATDSSFMQGAVFVNYITDFHNFIVENGLADGKPHTLVLDGHASHVNLDVIQLAMTLNIELFQLP 585 WL FLRRHPR++ERS RIYEANRIT D+EPR+ FY L ++P+ +H+ NTDETG + AE GQKVVG+ RSNSREN TVVATI+A G P I FK QR+Q + GP G+++ TDSSFMQG VF+ Y+ DFH + + GL DGKPH L+ DGHASHV+++VI+LAM L I LFQLP Sbjct: 111 WLGGFLRRHPRVAERSTRIYEANRITEDEEPRMVQFYERWAALHDEVKPKANHVHNTDETGTTPQGTKTTKAFAESGQKVVGSMRSNSRENITVVATISADGHTWAPTITFKRQRLQVDWFVERNGPEGARYTCTDSSFMQGDVFIAYLKDFHKQLGDRGLLDGKPHILLHDGHASHVSVEVIRLAMNLKIVLFQLP 307
BLAST of mRNA_A-nodosum_M_contig10021.1.1 vs. uniprot
Match: A0A6H5JR26_9PHAE (DDE-1 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR26_9PHAE) HSP 1 Score: 205 bits (522), Expect = 8.780e-63 Identity = 110/198 (55.56%), Postives = 135/198 (68.18%), Query Frame = 1 Query: 1 WLDLFLRRHPRLSERSCRIYEANRITADDEPRLKSFYANCKELITRLQPQPDHIWNTDETGALTVE--PAQRVIAERGQKVVGTKRSNSRENTTVVATINAAGTATPPLIIFKGQRVQAARLGN-GGPPGSKFAATDSSFMQGAVFVNYITDFHNFIVENGLADGKPHTLVLDGHASHVNLDVIQLAMTLNIELFQLP 585 WL+ FL RH R+S R RIYE+NR+T ++ RL FY + + QP DH+WNTDE+G TV+ QRV+AERGQ VV RS SREN T+V TINAAG P IIFKGQR + + GPPG+ + T+SSFM G VF+ YI +FH + E L DGKPH LVLDGHASHV+LDVI+LA++LNI L QLP Sbjct: 50 WLEGFLGRHKRISLRLARIYESNRVTCVEDERLHKFYDFWGQFLDEHQPAADHVWNTDESGG-TVQGTQGQRVVAERGQPVVAQMRSTSRENVTIVTTINAAGAVLAPTIIFKGQRFNGDWVADLNGPPGAYYDCTESSFMCGDVFIKYIQNFHKQLGERNLLDGKPHVLVLDGHASHVSLDVIKLAISLNIHLVQLP 246
BLAST of mRNA_A-nodosum_M_contig10021.1.1 vs. uniprot
Match: A0A6H5JR11_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR11_9PHAE) HSP 1 Score: 204 bits (519), Expect = 1.340e-62 Identity = 107/198 (54.04%), Postives = 134/198 (67.68%), Query Frame = 1 Query: 1 WLDLFLRRHPRLSERSCRIYEANRITADDEPRLKSFYANCKELITRLQPQPDHIWNTDETGALTVE--PAQRVIAERGQKVVGTKRSNSRENTTVVATINAAGTATPPLIIFKGQRVQAARLGN-GGPPGSKFAATDSSFMQGAVFVNYITDFHNFIVENGLADGKPHTLVLDGHASHVNLDVIQLAMTLNIELFQLP 585 WL FLRRH R+S R RIYEANR+T+ + RL +FY +E + +P PDH+WNTDE+G T++ QRV AE+GQ VV R+NSREN T+V TINAAG P +IFKG R + + GPPG+ + T+SSFM G VF+ YI +FH + L DGKPH LVLDGHASHV+ +VIQLA +LNI L QLP Sbjct: 48 WLQGFLRRHDRISLRLARIYEANRMTSPENDRLHNFYKFWQEFVNEHKPAPDHVWNTDESGG-TIQGTQTQRVFAEQGQPVVPQMRANSRENCTIVTTINAAGAVLDPTVIFKGVRFNQDWIADRNGPPGATYTCTESSFMCGDVFIKYIKNFHEQLRRRNLLDGKPHVLVLDGHASHVSFEVIQLAKSLNIHLVQLP 244
BLAST of mRNA_A-nodosum_M_contig10021.1.1 vs. uniprot
Match: A0A6H5JGP6_9PHAE (DDE-1 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGP6_9PHAE) HSP 1 Score: 212 bits (540), Expect = 1.760e-62 Identity = 110/197 (55.84%), Postives = 136/197 (69.04%), Query Frame = 1 Query: 1 WLDLFLRRHPRLSERSCRIYEANRITADDEPRLKSFYANCKELITRLQPQPDHIWNTDETGALTV-EPAQRVIAERGQKVVGTKRSNSRENTTVVATINAAGTATPPLIIFKGQRVQAA-RLGNGGPPGSKFAATDSSFMQGAVFVNYITDFHNFIVENGLADGKPHTLVLDGHASHVNLDVIQLAMTLNIELFQLP 585 WLD F +RHP LSE S RIYEANRI +DDE RL++FY + E + + + DH+WNTDETG+ +VIAE GQKVVG S SREN TVV TI+ G P II+KGQR+QA G PP ++ A T+SSFMQG VFVNYI DFH +++ GL +G PH LVLDGHASHV +V++LA LNI L+Q+P Sbjct: 71 WLDGFFKRHPALSECSARIYEANRIMSDDETRLQTFYKDFGEFVDKEKIPADHLWNTDETGSTPQGTKTMKVIAESGQKVVGAIHSKSRENVTVVVTISTVGATLAPWIIYKGQRLQADWAKGRNAPPNARLAVTNSSFMQGIVFVNYIRDFHRQLLDRGLINGTPHVLVLDGHASHVTYEVVKLARDLNIVLYQIP 267
BLAST of mRNA_A-nodosum_M_contig10021.1.1 vs. uniprot
Match: A0A6H5JV04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV04_9PHAE) HSP 1 Score: 211 bits (536), Expect = 2.490e-61 Identity = 108/197 (54.82%), Postives = 136/197 (69.04%), Query Frame = 1 Query: 1 WLDLFLRRHPRLSERSCRIYEANRITADDEPRLKSFYANCKELITRLQPQPDHIWNTDETGALTV-EPAQRVIAERGQKVVGTKRSNSRENTTVVATINAAGTATPPLIIFKGQRVQAARLGN-GGPPGSKFAATDSSFMQGAVFVNYITDFHNFIVENGLADGKPHTLVLDGHASHVNLDVIQLAMTLNIELFQLP 585 WL FL RHPR+ ER+ RIYEANR+T + EPR+ FY L+ L+P+ DH+ NTDETG + + GQKVV + R+NSRENTT+V TI+A G+ P IIFKGQR+Q GPP +++ TDSSFMQG VF+ Y+ DFH + + GL DGKPH L+LDGHASHV+++VIQLAM LNI LFQLP Sbjct: 110 WLAGFLERHPRVRERTTRIYEANRVTDESEPRIVEFYRKWAALLEDLKPEADHVHNTDETGTTPQGNKTMKAYCQAGQKVVESVRANSRENTTLVTTISADGSTWAPTIIFKGQRLQPDWFAEKNGPPDARYTCTDSSFMQGNVFIKYLKDFHQQLCKRGLIDGKPHILLLDGHASHVSVEVIQLAMELNIVLFQLP 306
BLAST of mRNA_A-nodosum_M_contig10021.1.1 vs. uniprot
Match: A0A6H5JBS6_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBS6_9PHAE) HSP 1 Score: 205 bits (521), Expect = 5.560e-61 Identity = 108/197 (54.82%), Postives = 134/197 (68.02%), Query Frame = 1 Query: 1 WLDLFLRRHPRLSERSCRIYEANRITADDEPRLKSFYANCKELITRLQPQPDHIWNTDETGALTV-EPAQRVIAERGQKVVGTKRSNSRENTTVVATINAAGTATPPLIIFKGQRVQAARLGN-GGPPGSKFAATDSSFMQGAVFVNYITDFHNFIVENGLADGKPHTLVLDGHASHVNLDVIQLAMTLNIELFQLP 585 WL FL+RHPR+SER+ RIYE+NRIT D+EP + Y ++ +P+ DH+ NTDETG + AE GQKVV + RSNS ENTTVV TI+A G P IIFKGQR+Q GP +++ TDSSFMQG VF+ Y+ DFH + + G+ DGKPHTLVLDGHASHV+ +VI+LAM LNI LFQLP Sbjct: 106 WLAGFLKRHPRVSERTTRIYESNRITEDNEPCIVELYKKLAAILDEHKPKADHVHNTDETGPTPQGTKTMKAFAEAGQKVVESMRSNSLENTTVVTTISANGATWAPTIIFKGQRLQPDWFAERNGPKDARYTCTDSSFMQGDVFIKYLKDFHKQLDDRGVLDGKPHTLVLDGHASHVSYEVIKLAMELNIILFQLP 302 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig10021.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig10021.1.1 >prot_A-nodosum_M_contig10021.1.1 ID=prot_A-nodosum_M_contig10021.1.1|Name=mRNA_A-nodosum_M_contig10021.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=195bp WLDLFLRRHPRLSERSCRIYEANRITADDEPRLKSFYANCKELITRLQPQback to top mRNA from alignment at A-nodosum_M_contig10021:2006..2911- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig10021.1.1 ID=mRNA_A-nodosum_M_contig10021.1.1|Name=mRNA_A-nodosum_M_contig10021.1.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=906bp|location=Sequence derived from alignment at A-nodosum_M_contig10021:2006..2911- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig10021:2006..2911- >mRNA_A-nodosum_M_contig10021.1.1 ID=mRNA_A-nodosum_M_contig10021.1.1|Name=mRNA_A-nodosum_M_contig10021.1.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=585bp|location=Sequence derived from alignment at A-nodosum_M_contig10021:2006..2911- (Ascophyllum nodosum dioecious)back to top |