Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 2592 |
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Cds size | 1665 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680866354.9322553-UTR-A-nodosum_M_contig100:878766..879164 | 1680866354.9322553-UTR-A-nodosum_M_contig100:878766..879164 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig100 878767..879164 + |
| 1680866354.9579208-UTR-A-nodosum_M_contig100:880829..881358 | 1680866354.9579208-UTR-A-nodosum_M_contig100:880829..881358 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig100 880830..881358 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680866354.9444683-CDS-A-nodosum_M_contig100:879164..880829 | 1680866354.9444683-CDS-A-nodosum_M_contig100:879164..880829 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig100 879165..880829 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig100.65.1 >prot_A-nodosum_M_contig100.65.1 ID=prot_A-nodosum_M_contig100.65.1|Name=mRNA_A-nodosum_M_contig100.65.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=555bp
MFGTATISTLSRPASGQEHPRSSRGVQRTPIQQQVPASPQRPLVGSPPHS
RQGVGSTTGAMRYGGHKPVAASPVAPSPRVRVLTGAPYDTLPEGASATSL
QTSVSSLLLSPDGVSHDHGTQGNQMSVPGTLENNSGPTVGSARAMARRVN
NEGADNTSNFIDMLAQKLPPFGGSLPSPSPSPSPPIRKSHRLRPESPLPQ
TRGQLSIVPTLRRDQSFPPANPSLPEDLISSGVGDFHPICRRNSVDLDDI
FAQPTRESDRHNKEAPAAGYGRNGGQDDFASVGFRPQPGDHEQYFYDFGP
LYDSDAGPGGGDNKNNCYSATDSPTSADAAKEGPNGSLFQEGRDESMHVE
RRSSFEKLKAMIPFISQDSMQVSSGLASAAPPHGNSTSSNTGVGASPVTS
PSSTASTPSKRRGDSRGHDDGRRKKPSIAGLDTQGQKSYKTNPHLVGKRR
DGSNGKVPRGGRLGNANAAPAAGRPQTAVGLVGAASPGRGSAMQKRGCRR
HGGAEQERGSRLAPGGGALLTTFFPSVQGSSGIPSAYGTESSVTDGFILS
STRV* back to topmRNA from alignment at A-nodosum_M_contig100:878767..881358+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_A-nodosum_M_contig100.65.1 ID=mRNA_A-nodosum_M_contig100.65.1|Name=mRNA_A-nodosum_M_contig100.65.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=2592bp|location=Sequence derived from alignment at A-nodosum_M_contig100:878767..881358+ (Ascophyllum nodosum dioecious)
ACGCTTTCGATAGTTTAGACCGTCGGCGGGCGAATTGAAGGAGAGGTTTA
TTGTCACACAGGCGAGGTGGAGACCAAGGAGCGAGCCCCTTGACTCAAGA
CGTGTGCGCATCGCAGTCACAAATAAGCTGAGCGCAACATCGTGTGACCC
TGAAGTTATCTCCGTCAAGCTGCTCGAACTGGTTGCGTCGAAAATCAGCT
TGCAGCTACGTACCGTACCCTACACACACTGCCTGCAGTACGAGTGCCAC
GGCCCGCTTGGAGCTTATTTTCCGCCTTCTGCTGGTCCTCTTTCCCCGTT
CACGAGGCGTACTGTTTCACCTGGCAAGGTGTCAGAGCGGACGTATTCGT
TGGCCTTGGGCCAGGGACCGAGTTACCTGCTACGTGGCTCGAGACAGCAT
GTTCGGTACAGCAACGATTTCGACGCTCAGCAGGCCAGCGTCGGGTCAAG
AACATCCGAGGTCCTCTCGGGGCGTTCAGCGAACTCCGATTCAGCAACAG
GTACCTGCCTCGCCGCAGCGGCCACTCGTAGGAAGCCCGCCGCATTCTCG
ACAAGGGGTTGGCAGCACCACTGGAGCCATGCGATACGGTGGACATAAAC
CAGTGGCAGCCAGCCCGGTGGCGCCATCGCCACGGGTCCGGGTCCTGACA
GGGGCCCCGTATGACACCTTACCGGAGGGGGCCTCTGCAACGTCCTTGCA
AACCTCCGTGTCGAGTCTCCTGCTATCGCCTGATGGGGTCAGCCACGACC
ACGGAACCCAGGGGAACCAGATGAGCGTTCCTGGGACGCTTGAAAACAAC
AGCGGACCAACAGTGGGCTCTGCTAGGGCGATGGCCAGGAGAGTGAATAA
TGAAGGCGCCGACAACACTTCCAACTTCATCGATATGCTCGCCCAAAAAT
TGCCGCCTTTTGGAGGGAGTCTTCCATCGCCGTCGCCGTCACCGTCGCCG
CCCATCAGGAAAAGCCACCGCCTAAGACCGGAATCTCCCCTGCCGCAGAC
GCGTGGTCAGCTCTCAATCGTTCCTACTCTTAGAAGAGACCAGTCCTTCC
CGCCTGCGAACCCCTCGCTCCCCGAAGACCTCATCAGCTCGGGTGTGGGG
GATTTCCATCCGATATGCCGGCGCAACTCAGTGGATCTCGATGATATTTT
TGCCCAGCCAACTCGGGAGAGCGACCGCCATAACAAGGAAGCCCCTGCCG
CGGGATATGGGAGAAATGGTGGCCAAGATGACTTCGCGTCTGTGGGGTTC
AGGCCGCAACCGGGAGATCATGAACAATACTTTTACGATTTTGGTCCTCT
GTACGACAGTGACGCTGGCCCCGGTGGCGGCGACAATAAGAACAACTGTT
ATAGTGCTACCGACAGCCCCACCAGCGCCGACGCTGCCAAGGAGGGACCC
AACGGTTCTCTGTTCCAGGAGGGTCGCGATGAGTCTATGCACGTAGAGCG
CCGCTCAAGCTTCGAAAAACTCAAGGCCATGATCCCCTTCATCTCACAGG
ACAGCATGCAGGTTTCTTCGGGACTTGCGTCCGCGGCTCCCCCTCACGGC
AACAGCACTAGCAGCAACACTGGCGTCGGTGCATCGCCGGTCACTTCGCC
GAGCTCTACAGCCTCCACGCCATCTAAGAGGCGTGGCGATTCACGCGGCC
ATGACGATGGACGACGAAAGAAACCGTCGATCGCGGGCCTCGACACGCAA
GGGCAGAAATCTTACAAGACCAACCCTCACTTGGTCGGTAAGCGGAGAGA
CGGAAGCAATGGTAAGGTGCCGCGTGGTGGAAGGCTGGGTAACGCTAACG
CGGCACCAGCAGCAGGACGGCCGCAAACGGCCGTCGGCCTGGTGGGGGCA
GCGTCGCCAGGGAGAGGGAGCGCGATGCAAAAGAGGGGGTGCAGGAGGCA
TGGGGGGGCTGAGCAGGAGCGCGGGTCGAGGCTGGCGCCTGGCGGAGGAG
CTTTACTGACAACGTTCTTCCCATCAGTCCAAGGCAGTTCGGGTATACCT
TCTGCGTACGGGACTGAATCAAGTGTGACGGATGGTTTCATCTTGTCGTC
GACCCGTGTGTGAGTTCTGTCCATGAGGACGTTCAGTGAGTCCTGATTTA
TAAAAAGTAGGTGCAGTAAACTAGTTCAGTGCTGGGGGGCGGAGGGCAAT
CATGGTGTCTGTTTGTTGTGAACTTTGAAAAACATGAAACTTTGTGACAT
ACCGAAGCAGTGTATTTTTTGCCTACAGTGAGGATTTTGTCTTTGTTTTG
TGGAAATGTGCGATTAGAGGTTGCATCGCCCCCGCGCGTCCGTCCAGCTA
TATACACCTTCGTGTCCTACCTTTCCCATCCGCGAAATTACGAACTGCGC
GAATGCTTCTGTAGCTCCATAGCTAGATCTGCTGCTGGGGGAGGAGGGGA
GCGGTCATCTGTCGAGGAACTTGCCTGTCGCTGTCCGCCTTCGATTGTTT
GTTTATAGGGAGGGATATGTACGAGAGCCAAGCATGTTCATGAACGTAGC
AGTCTGTGTAATCTGTGTACAGAAAACCTTGGAAAGCAATTTTTAGTGAG
GCTTTATACTTGATACGATACGAAGATATAATTTACCAATCA back to topCoding sequence (CDS) from alignment at A-nodosum_M_contig100:878767..881358+ >mRNA_A-nodosum_M_contig100.65.1 ID=mRNA_A-nodosum_M_contig100.65.1|Name=mRNA_A-nodosum_M_contig100.65.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1665bp|location=Sequence derived from alignment at A-nodosum_M_contig100:878767..881358+ (Ascophyllum nodosum dioecious)
ATGTTCGGTACAGCAACGATTTCGACGCTCAGCAGGCCAGCGTCGGGTCA
AGAACATCCGAGGTCCTCTCGGGGCGTTCAGCGAACTCCGATTCAGCAAC
AGGTACCTGCCTCGCCGCAGCGGCCACTCGTAGGAAGCCCGCCGCATTCT
CGACAAGGGGTTGGCAGCACCACTGGAGCCATGCGATACGGTGGACATAA
ACCAGTGGCAGCCAGCCCGGTGGCGCCATCGCCACGGGTCCGGGTCCTGA
CAGGGGCCCCGTATGACACCTTACCGGAGGGGGCCTCTGCAACGTCCTTG
CAAACCTCCGTGTCGAGTCTCCTGCTATCGCCTGATGGGGTCAGCCACGA
CCACGGAACCCAGGGGAACCAGATGAGCGTTCCTGGGACGCTTGAAAACA
ACAGCGGACCAACAGTGGGCTCTGCTAGGGCGATGGCCAGGAGAGTGAAT
AATGAAGGCGCCGACAACACTTCCAACTTCATCGATATGCTCGCCCAAAA
ATTGCCGCCTTTTGGAGGGAGTCTTCCATCGCCGTCGCCGTCACCGTCGC
CGCCCATCAGGAAAAGCCACCGCCTAAGACCGGAATCTCCCCTGCCGCAG
ACGCGTGGTCAGCTCTCAATCGTTCCTACTCTTAGAAGAGACCAGTCCTT
CCCGCCTGCGAACCCCTCGCTCCCCGAAGACCTCATCAGCTCGGGTGTGG
GGGATTTCCATCCGATATGCCGGCGCAACTCAGTGGATCTCGATGATATT
TTTGCCCAGCCAACTCGGGAGAGCGACCGCCATAACAAGGAAGCCCCTGC
CGCGGGATATGGGAGAAATGGTGGCCAAGATGACTTCGCGTCTGTGGGGT
TCAGGCCGCAACCGGGAGATCATGAACAATACTTTTACGATTTTGGTCCT
CTGTACGACAGTGACGCTGGCCCCGGTGGCGGCGACAATAAGAACAACTG
TTATAGTGCTACCGACAGCCCCACCAGCGCCGACGCTGCCAAGGAGGGAC
CCAACGGTTCTCTGTTCCAGGAGGGTCGCGATGAGTCTATGCACGTAGAG
CGCCGCTCAAGCTTCGAAAAACTCAAGGCCATGATCCCCTTCATCTCACA
GGACAGCATGCAGGTTTCTTCGGGACTTGCGTCCGCGGCTCCCCCTCACG
GCAACAGCACTAGCAGCAACACTGGCGTCGGTGCATCGCCGGTCACTTCG
CCGAGCTCTACAGCCTCCACGCCATCTAAGAGGCGTGGCGATTCACGCGG
CCATGACGATGGACGACGAAAGAAACCGTCGATCGCGGGCCTCGACACGC
AAGGGCAGAAATCTTACAAGACCAACCCTCACTTGGTCGGTAAGCGGAGA
GACGGAAGCAATGGTAAGGTGCCGCGTGGTGGAAGGCTGGGTAACGCTAA
CGCGGCACCAGCAGCAGGACGGCCGCAAACGGCCGTCGGCCTGGTGGGGG
CAGCGTCGCCAGGGAGAGGGAGCGCGATGCAAAAGAGGGGGTGCAGGAGG
CATGGGGGGGCTGAGCAGGAGCGCGGGTCGAGGCTGGCGCCTGGCGGAGG
AGCTTTACTGACAACGTTCTTCCCATCAGTCCAAGGCAGTTCGGGTATAC
CTTCTGCGTACGGGACTGAATCAAGTGTGACGGATGGTTTCATCTTGTCG
TCGACCCGTGTGTGA back to top
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