mRNA_A-nodosum_M_contig10.78.88 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig10.78.88 vs. uniprot
Match: A0A6H5L306_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L306_9PHAE) HSP 1 Score: 1610 bits (4170), Expect = 0.000e+0 Identity = 1167/2783 (41.93%), Postives = 1428/2783 (51.31%), Query Frame = 1
Query: 28 PSTSLEEIFRRWGLDAALRRYYDRGLGIEHLYPWQAKCLAEHGVAEGTRNLLYFAPTSGGKTMVAELLLLLRVMALPAYPEPERDRRQGGLGMEQQKGAVIGSSTGDSESGA-----RKVVFVLPFISMVTEKVKHLQRVVAPYNRGRPRRQRIK---------------------------------------VKALYGSKGGGRGGIRGTQIAVCTIEKANALINRMAVANELHELSCLVLDELHMIGEGSRGQTVELLLSKLVRANRTAYEDKSEEVAAALTVSGDRSSESRPQPLPPPPQGNAADTSEEDVKNLRGKATGRMGRRTQIIGMSATLSNGAELAAWLGAILHVSDYRPVPLDERVLLGIHVYDKSGAVVRSFSEPAHPETDPDHVVTLCRESCIANDQVIIFCSTKQFCHNCAIKVAKNLGVSASKAVAAERSALMVKLAKETCIGVDPILQETIPQGVAFHHAGLADTERAAIEAAFRAGTLGVLAATSTLGAGVNLPAGRVILRNLNGAGGGLSATSYRQMAGRAGRKGAGRARGEAFLIASNKGQATKATA-----LMNAGLAPVKSALKP-------------SADGGAGLTKLVLEGVCGGLVKRESDLPEYLA-CSLLFHQQHDGVARESLLDYAFAALQVLVDEACVELVPQIRPTVAAPXXXXXXXXXXXXXXXXXXI--------------------RPASGARQ-PGVKLPLIS---PYI---RSGLRKIPQSASVAVPAGRASKVSAGIC----------------------VNVVGMDDGRFKPTKLGMAIFRSSLGPAEGLMVYRDLSEAKHGINLRNTLRLAYLLTPLCPPSGLKPNWERLHALYSRAKAASAATQNPDRRSASLVDDFHRIGITEGHLHVWTSRGPSGATKQGPILSPDYVREVASVRRGSSAPVSRGRGDRVKASAAQKAVRLVAAMILKDVSDGYNLGQ--VAKSYGISKGDLQTLRQSTATFSSMVASFLKELGWTMFLMIVKGYVPRLSLGVSNNLLPLMQVPGMSRTEAGALYRGGIVNAKSLLAASNEKVAMALRMNVPFRMRTESG------GSESVRFERRAQILKIAAGDMDAKREKDNKAQAIKLLKAVQGRLAKGDASNGLGGALADLGGESDVLVSVAPSKXXXXXXXXXXXXXXXXXXXXXXXGGCSDSLGPTGLSDEELEEGDGSSDASGSGCDTDGSDLEDSDDMMDEVTEAMLFAERVADEAEEDSAGSENESGFGGRAGEIREGSDPGVGS----------------------GCKLREDGRSSLAKSGRSLGDDTEAFLSRG-----EGSIPREKLRQEAAAKRRKTCTH----------------AIDRGSSRGTRDPAVGGGQPQTRE-----AGTGQALKATVILAKAKATVEAEAEARTTFGDTHRRDRPLTYSTEALAREPSGPVGPHAGSIGGAXXXXXXXHSAGAAAARVCSNGSAVRGNIKCDENYAIDNAKTPEHHRATQRTPKMAIRPPPEMGSSSPSFLYEASSPIPREGRTRMGNCNGASPCPALDACRPFPGRVQGGLPGVRDVFAGGGGAAAVAKFRTSWRRSKCFSFAIGGRRGLPRVGPRAGAAAGGWSSGRTGLGCSYPRAWEALLPS-RLPLVPYTVPSAGESFVPLTRHENENATRVVSGIAVSFDGVASHYLSLPPQLPRRPIKWQRLHDDSGVRGRSAPGSLWSSTLGVDHRKDSSGGRAAFPAKAIDAVAQFVGFPWLCSDCSGHARRRKCARHSHSSSRDGASVDGTRRR----EPWNQTLMVSRRWNALGVEVLNRLATEEPSGRWRLVRDMMEDPDSIKVCLDMKGALVCLRSLGIEVRGSLEDPEVARWLVEPAVDELTPLQPREVKRNKRKTA---PAPPPRTPPESLILDRQPKGFVDLWGMQAAETLSLMGRRERDLKDLNLALAFHLIEMPAVRAAAMMEYCGLALKASVVSDMRRDLDLKLRDLENVADHLAGDREAAGDKTPLASPKRVHDILYTAMGVKPPPSWRSSGGGDGRHVVPPRGGTSKRVSLGPTDTGSLQELLEVAGTEAPAEVSNNPFVAGIAFRCSVLGLQEMIRFPGDGASREKREILFFWWGFRPICAIIAHNGRAEVYFPSPFPAAPPTPACLLCDYLGKCDAQDARGFIRAVIQHRALAPAARSLDGLMAARRWHPHFGGVRVNPSVDMFTTTGRMIASNPPLQNLEHKIRFKRSWRLSLAEEMEAEVPDLQAIPRVWAGQDGEDTARVGEESR-HGAMGSMQ-----DASLRDALRVIVANTGESGGVSFGAIVAIVEDRCLDDPVYRQQPASLPRPLASPPPPPSSADVGVQTAREMAKDGGVGEACAALGGESMASFWRKRGHPYTPWEASTTRQVLIRLGFQRGGDGGVGASAKAYSYPADKVFRMRASFLSEAKSEALQASAGCVPKHPWFGEEAVLRPRGALVPSQGYVFVSADYSQIEMRLMAHLSGDPDLLGVFADGGDVFRAIAAALQGGGKMAAHITDDERRQTKIVVYGVLYGQSAETLAPQLGVSRPRAWKIRETVLKTYPRLRDFLRRVKDDCKKRGFVETLLGRRRYLPHINSADAKERARAERQAANTVCQGSAADLLKLAATNVASRLERCEWMWKSRMAAKESPRNASRDAIDGEYSP-----------PSRFSEDGGRSELARNPACRLVLSIHDELLYEVLEPHAEEVARVVRACMEGACSLLVPLVAQPRIGKTWANMSDVE 7797
P TSLE +FRRWGLD ALR ++ R LGIEHLYPWQA CLA GVAEG ++LLYFAPTSGGKTMVAELLLLLRVM LP R G G E ESGA RKVV LPF+SMVTEK KHLQ +VAPYNRGRP++QRI+ V+AL+G+KGG ++ QIAVCTIEKAN L+NRMA A+ELHELSCLV+DELHMIG+G RG V +N+ P PL + TQI+GMSATLSNGAELA WLGA LHVSD+RP+PLDER++ VIIFCSTKQFCHNCA+K ETIP GVAFHHAGLADTER+AIE AFR+G L VLAATSTLGAGVNLPAGRVILRN+N GGGLSAT + +G + + K T+ N PV + +P SA T L+ S LP L C+L+FHQQ D AR+ L DYA+AA+Q+L+DE CVEL+ P V P XXX R A A P +P+ P + + G++ P + + A R + +A + V G DD PTKLG+AIFRSS+ P +GLM+YRDLSEAK+GINLR+TL LAYLLTPL PP+GLKPNWERL A+Y+ A+AA+A T P +A LV+D H+IGITE LH+W SRGP G T++ P+LSP V++ AS RRG G GD K +DV G Q VAKSYG++KG+LQ LRQSTATFS MVASFLK VPGMSRTEA AL++ GIVNAKSLL+AS+++VA ALR+NVPFR T+ G E RFERRAQ+L +A +D KREK NKAQA+KLLKAV+ RL G S +GG LA+LGG +D LV V P GG +LG TGLSD+ +E G L + D +D A L VA +D R+G VGS G KL +DG+ + RSL + + + ++P ++R AA ++ H A RG + P+VG G R AG V ++ AT AEA +P ++ + R P + P +GS + AG + + + G ++++ +D T R+ + E P+F P G G+ + GR QG DVFAGG AAVA+F ++WRRSKCFSF +G R L + +G++ GG + Y R+WEAL+ S LP+ PYTVPS GE VPL+ QR H +S + W A P ++++A FVGFPWLC+ C R + + + DG D +RR PWNQ L+V RRWNALGVE LNRLA EEPSGRW L+RD+MED ++ KVCLDMKGALVCLRSLG+ V+G LEDP VARWL EP +++ T LQ P PPPR PP SL L R P VDLW +QAA TLS M +E+ LKDL+L L F L+EMPAV AAA+MEY GLALK +V RR+++L+L DLE + + LAGD E DKT LASPKR+HD+LY +GVKPPPSW +SG G G GG SKR SLGPTDT SLQELL+ HR LAPA RSL GL+A +R HPH GVRVNP +D+FTTTGRMI S+PPLQNL+HKI RSWR SLAEEMEA+VP L+ +PR+WA D G +S GA+ S + + R+A+RV +A G + +S G IVA+VED+CL+DPV+R DVG A + A+G SMAS WR+ GH Y+ WEA +TRQVL+RLG +RG + YSYPADKVFR++A+F S+AK+EA++ G + PWF +EA+++PR +LV S GY FVSADYSQ+EMRLMAHLSGDPDLL VFADGGDVFR IAAAL+G G A IT++ERRQTKIVVYGVLYGQSA+ L PQL +SRP A+KIR+TVL TYP+L +FL++VK+DCK+ G+VETLLGRRRYLP INS D ER+RAERQAANT QGSAADLLKLAATNVA+RLERCEWM SR AAK + A G S P RF DGGRSELAR PACRLVLSIHDELLYEVLEPH EVA++V+ACMEGACSL VPLVA PR G W +M+ +E
Sbjct: 5 PPTSLEYLFRRWGLDPALRHHHGRSLGIEHLYPWQASCLALPGVAEGRQDLLYFAPTSGGKTMVAELLLLLRVMGLPLA-------RSTGEG-EDXXXXXXXXXXAVVESGAITGLLRKVV--LPFVSMVTEKAKHLQSIVAPYNRGRPKKQRIQASSSQQHHRQWGEAHHGDDYPARQKRPCVWIVRQIVLEQVRALHGAKGGD---LKHAQIAVCTIEKANGLVNRMAAADELHELSCLVVDELHMIGDGRRG----------VGSNK-------------------------PAPLR---------------------------QHTQIVGMSATLSNGAELAKWLGATLHVSDFRPIPLDERIV------------------------------------------VIIFCSTKQFCHNCALK-------------------------------------ETIPHGVAFHHAGLADTERSAIEKAFRSGALDVLAATSTLGAGVNLPAGRVILRNINAVGGGLSATRFSSDV---------VVKGGSVAVLDQKKYTTRTARSAEPRFFNVFSCPVLATDEPPHVPTDPLHPPSPSALSSPRPTSACRYAYLKLLLMYRSCLPAMLLKCTLIFHQQPDEAARDRLHDYAWAAIQLLIDEGCVELIQPPTPAVPKPIATAAKAPASASLVAXXXXXXXXXXXXXXXXXXXXXXNKRVADTATHVPATYVPVTKRSKPTVVGQKVGVQTPPVAHNDTAAAARGRRATAAMSCEAQDGDFRKEPRSGGLGSVSGVEEAGSDDRLLVPTKLGLAIFRSSMPPGDGLMIYRDLSEAKNGINLRHTLYLAYLLTPLSPPAGLKPNWERLRAMYASAQAAAAET--PPGPNAHLVEDLHKIGITESQLHLWASRGPGGGTREAPLLSPTAVQQAASARRG-------GLGDDGKTGTR------------RDVRGGTIDSQSPVAKSYGMNKGELQNLRQSTATFSGMVASFLK-------------------------------VPGMSRTEASALFQEGIVNAKSLLSASSDRVATALRINVPFRSATKEGRGKDRGAGECFRFERRAQMLADSARAVDTKREKGNKAQAMKLLKAVRSRLGSGGGS--VGGDLAELGGGND-LVCVVPK-----GRKRKRSRELSSGRRPGHGGGXXXNLGETGLSDDGVESG-SDXXXXXXXXXXXXXXLSEGGDEIDNAVAAFLSG--VA----QDKXXXXXXXXXXXXXXXDRDGD---VGSIDAEERRPQXXXXXXXXXXXCGGPKL-DDGKQGI----RSLAAQPTSARAPSPHHHQQSTVPLLEIRDSAAGVAQQAPQHRGAGGDGRFRGSVLARATQRGMGKSEVAPSVGSGGAIQRSGLFRGAGGSGGQGLVVAAEQSPATSTAEALMTPRNRSCGNEGKPGSHENDRTMRTPVLRLSPDSGSSS-------FLYEAGTDSCPAILD--SADGEDNNEDHFPLDVGGTESASRSDSAAAAAGVAEEQEDLRVGPAFAACRGLRAPTAGNQARGSHHSPE------------GRRQGDS---TDVFAGG--PAAVAEFSSAWRRSKCFSFVLGSR-DLQWL-RNSGSSHGGGAGRGDRRAWEYRRSWEALVASPALPVAPYTVPSGGEGGVPLS---------------------------------------QRGHGESAS-------ARWE----------------ALPGGVLESIALFVGFPWLCAGCGSEYTRCRSHKLADDGVDDGGGNDSGKRRGRKLRPWNQALLVCRRWNALGVEALNRLAAEEPSGRWGLLRDVMEDKNTTKVCLDMKGALVCLRSLGVNVKGPLEDPAVARWLAEPPIEDTTQLQXXXXXXXXXXXXXXXPLPPPRVPPASLALARPPVDVVDLWCLQAAATLSFMAEKEQALKDLSLTLPFFLLEMPAVSAAALMEYSGLALKVGLVVGARREVELRLDDLERLGEQLAGDYEELDDKTALASPKRIHDMLYVTLGVKPPPSW-TSGRGSGAGS----GGASKRASLGPTDTSSLQELLK----------------------------------------------------------------------------------------------------------HRYLAPAKRSLAGLLATKRRHPHLDGVRVNPRIDLFTTTGRMITSDPPLQNLDHKIVLTRSWRTSLAEEMEADVPGLEIVPRLWA-----DAKGGGSQSGVRGAVSSPRLSPEAEEEFREAVRVALAPRGNATMMSTGEIVAVVEDKCLNDPVHRHTDPD--------------GDVGNGPPAARAPED------PAVGAGSMASLWRESGHSYSSWEAESTRQVLVRLGGRRG---------RVYSYPADKVFRVQANFFSDAKAEAMK-EGGLGARCPWFAKEAMMKPRDSLVASPGYAFVSADYSQVEMRLMAHLSGDPDLLKVFADGGDVFRTIAAALKGRGNKAEDITEEERRQTKIVVYGVLYGQSADALVPQLRLSRPEAFKIRQTVLNTYPKLTEFLKKVKEDCKECGYVETLLGRRRYLPQINSTDKAERSRAERQAANTTTQGSAADLLKLAATNVAARLERCEWM--SRPAAKPICTPSRNAAAGGTLSSALASGTADATVPCRFPRDGGRSELARRPACRLVLSIHDELLYEVLEPHVAEVAQIVKACMEGACSLSVPLVAHPRWGTKWGSMAPME 2311
BLAST of mRNA_A-nodosum_M_contig10.78.88 vs. uniprot
Match: D7FM15_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM15_ECTSI) HSP 1 Score: 1371 bits (3549), Expect = 0.000e+0 Identity = 940/2034 (46.21%), Postives = 1163/2034 (57.18%), Query Frame = 1
Query: 1 PATEIPRPPPSTSLEEIFRRWGLDAALRRYYDRGLGIEHLYPWQAKCLAEHGVAEGTRNLLYFAPTSGGKTMVAELLLLLRVMALP-----AYPEPERDRRQGGLGMEQQKGAVIGSSTGDSESGARKVVFVLPFISMVTEKVKHLQRVVAPYNRGRPRRQRIKVKALYGSKGGGRGGIRGTQIAVCTIEKANALINRMAVANELHELSCLVLDELHMIGEGSRGQTVELLLSKLVRANRTAYEDKSEEVAAALTVSGDRSSESRPQPLPPPPQGNAADTSEEDVKNLRGKATGRMGRRTQIIGMSATLSNGAELAAWLGAILHVSDYRPVPLDERVLLGIHVYDKSGAVVRSFSEPAHPETDPDHVVTLCRESCIANDQVIIFCSTKQFCHNCAIKVAKNLGVSASKAVAAERSALMVKLAKETCIGVDPILQETIPQGVAFHHAGLADTERAAIEAAFRAGTLGVLAATSTLGAGVNLPAGRVILRNLNGAGGGLSATSYRQMAGRAGRKGAGRARGEAFLIASNKGQATKATALMNAGLAPVKSALKPSADGGAGLTKLVLEGVCGGLVKRESDL--------PEYLACSLLFHQQHDGVARESLLDYAFAALQVLVDEACVELVPQIRPTVAAPXXXXXXXXXXXXXXXXXXIR----------------------------------------PASGARQP---GVKLPLISPYI-------RSGLRKIPQSASVAVPAG------RASKVSAGICVNVVGMDDGRFKPTKLGMAIFRSSLGPAEGLMVYRDLSEAKHGINLRNTLRLAYLLTPLCPPSGLKPNWERLHALYSRAKAASAATQNPDRRSASLVDDFHRIGITEGHLHVWTSRGPSGATKQGPILSPDYVREVASVRRGSSAPVSR------GRGDRVKA----SAAQKAVRLVAAMILKDVSDGYNLGQVAKSYGISKGDLQTLRQSTATFSSMVASFLKELGWTMFLMIVKGYVPRLSLGVSNNLLPLMQVPGMSRTEAGALYRGGIVNAKSLLAASNEKVAMALRMNVPFRMRTESGGSES------VRFERRAQILKIAAGDMDAKREKDNKAQAIKLLKAVQGRLAKGDASNGLGGALADLGGESDVLVSVAPSKXXXXXXXXXXXXXXXXXXXXXXXGGCSDSLGPTGLSDEELEEGDGSSDASGSGCDTDGSDLEDSDDMMDEVTEAMLFAERVADEAEEDSAGSENESGFGGRAGEIREGSDPGVG---------------SGCKLREDGRSSLAK--SGRSLGDDTEAFLSRGEGSIPREKLRQEAA--AKRRKTCTHAIDRGSSRGT---RD-----------PAVGGGQPQTREA---GTGQALKATVILAKAKATVEAEAEARTTFGDT--HRRDRPLTYSTEALAREPSGPVGPHAGSIGGAXXXXXXXHSAGAAAARVCSNGSAVRGNIKCDENYAIDNAKTPEHHRATQRTPKMAIRPPPEMGSS--SPSFLYEASSPIPREGRTRMGNCNGASPCPALDACRPFPGRVQGGLPGVRDVFAGGGGAAAVAKFRTSWRRSKCFSFAIGGR--RGLPRVGPRAGAAAGGWSSGRTGLGCSYPRAWEALLPS-RLPLVPYTVPSAGESFVPLTRHENENATRVVSGIAVSFDGVASHYLSLPPQLPRRPIKWQRLHDD--------SGVRGRSAPGSLWSSTLGVDHRKDSSGGRAAFPAKAIDAVAQFVGFPWLCSDCSGHARRRKCARHSHSSSRDGASVDG------TRRRE--PWNQTLMVSRRWNALGVEVLNRLATEEPSGRWRLVRDMMEDPDSIKVCLDMKGALVCLRSLGIEVRGSLEDPEVARWLVEPAVDELTPLQPREVKRNKRKTAPAPPP----RTPPESLILDRQPKGFVDLWGMQAAETLSLMGRRERDLKDLNLALAFHLIEMPAVRAAAMMEYCGLALKASVVSDMRRDLDLKLRDLENVADHLAGDREAAGDKTPLASPKRVH-DILYTAMGVKPPPSW 5655
P +P PP TSLE +FRRWGLD ALR Y+ R LGIEHLYPWQA+CLA GVAEG ++LLYFAPTSGGKTMVAELLLLLRVM LP E E + GAV G D + R+ + VLPF+SMVTEK KHLQ +VAPYNRGRP+++RI+V+AL+G+KGG ++ QIAVCTIEKAN L+NRMA A+ELHELSCLV+DELHMIG+G RGQ +ELLL+K+VRANR A VA A+ + + QP PP + TQI+GMSATLSNGAELA WLGA LHVSD+RP+PLDERV+LG+HVYDK G VVR F+ PAHP++DPDHVVTLCRESC A DQVIIFCSTKQFCHNCA+K ETIP GVAFHHAGLADTER+AIE AFR+GTL VLAATSTLGAGVNLPAGRVILRN+N GGGLSATSYRQMAGRAGRKGAGRARGEA LIA+NKGQA +AT LMNAGLA V+SAL P+ADGG G T++ LE VCG L++ +DL + C+L+FHQQ D AR+ L DYA+AA+Q+L+DE CVEL+ + P VA P XXXX PA+ +P G KL + +P + + R+ + S G R+ + + V G DD PTKLG+AIFRSS+ P +GLM+YRDLSEAK+GINLR+TL LAYLLTPL PP+GLKPNWERL A+Y+ A+AA+A T P +A LV+DFH+IGITE LH+W SRGP G T++ P+LSP V++ AS RRG + RG K + A++AVRLVAAM LKDVSDGY+LGQVAKSYG++KG+LQ LRQSTATFS MVASFLKELGWT+FLM+VKG++P+LSLGVSN LLPLMQVPGMSRTEA AL++ GIVNAKSLL+AS+++VA ALR+NVPFR T+ G + RFERRAQ+L +A +D KREK NK QA+KLLKAV+ RL G + +GGALA+LGG +D++ V + XXXXXX LG TGLSD+ L + D +D A L VA++ G KL +DG + + + + + + + + ++P ++R AA A+R A G RG+ RD P+VG G P R G G + +++A ++ + AEA T ++ +P + + R P + P +GS + AG + GSA G ++++ +D T R + E G P+F P G G+ A +D+ DVFAGG AAAVA+F ++WRRSKCFSF +G R R L G G AG Y R+WEAL+ S LP+ PYTVPS GE VPL++ + + RVVSGIA+SFDG S YL LPP LP R W + D SG R PGS +GV G A P A++++A FVGFPWLC+ C +C SHS + DG G RRR+ PWNQ L+V RRWNALGVE LNRL EEPSGRW L+RD+ME+ ++ KVCLDMKG+LVCLRSLG+ V+G LEDP VARWL EP +++ LQ R PP SL L R P VDLW +QAA TLS M +E+ LKDL+L L F L+EMPAV AAA+MEY GL LK +V RR+++L+L DLE +A+ LAGD E L+SP V D A G P SW
Sbjct: 7 PEKTMPTEPP-TSLEYLFRRWGLDPALRHYHGRSLGIEHLYPWQARCLALPGVAEGRQDLLYFAPTSGGKTMVAELLLLLRVMGLPLACSTGEGEDEGRAXXXXXAAVVESGAVTGLPRKDQTATTRRAIIVLPFVSMVTEKAKHLQSIVAPYNRGRPKKKRIQVRALHGAKGGD---LKQAQIAVCTIEKANGLVNRMAAADELHELSCLVVDELHMIGDGGRGQILELLLAKVVRANRGAA------VAPAVPQAETDADVGSNQPAPPR-------------------------QHTQIVGMSATLSNGAELAKWLGATLHVSDFRPIPLDERVVLGMHVYDKEGFVVREFAAPAHPQSDPDHVVTLCRESCRAGDQVIIFCSTKQFCHNCALK-------------------------------------ETIPHGVAFHHAGLADTERSAIEKAFRSGTLDVLAATSTLGAGVNLPAGRVILRNINAVGGGLSATSYRQMAGRAGRKGAGRARGEALLIAANKGQAARATGLMNAGLAAVRSALTPTADGGTGFTRMFLEAVCGKLIRTRADLRTGCPAVSSPNITCTLIFHQQPDEAARDRLHDYAWAAIQLLIDEGCVELIQRPTPAVAKPIATATKATASASLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKRVADTATHVPATYVPATKRSKPIVVGQKLGVQTPPVVYNDTAAAARARRATAAMSCEAQHGDFRKEPRSGGLGSASGVEEAGSDDRLLVPTKLGLAIFRSSMPPGDGLMIYRDLSEAKNGINLRHTLYLAYLLTPLSPPAGLKPNWERLRAMYASAQAAAAET--PPGPNAHLVEDFHKIGITESQLHLWASRGPGGGTREAPLLSPTAVQQAASARRGGRGEDGKTGTRRDARGSEEKKPTGLNPAKRAVRLVAAMALKDVSDGYHLGQVAKSYGMNKGELQNLRQSTATFSGMVASFLKELGWTIFLMLVKGHIPKLSLGVSNQLLPLMQVPGMSRTEASALFQEGIVNAKSLLSASSDRVATALRINVPFRTATKGGRGKDRGAGGCFRFERRAQMLADSARAVDTKREKGNKTQAMKLLKAVRSRLGSGGGA--VGGALAELGGGNDLVCIVPKGRKRKRSRGLSSGRRPGHGXXXXXX------LGETGLSDDXXXX--XXXXXXXXXXXXXXXXLSEGGDEIDNAVAAFLSG--VAEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGGLKL-DDGNQGIGRLLAAQPMSAWAPSPHQQQQSTVPLLEIRDSAAGVAQRAPQQQGAGSDGRLRGSVPARDTQRGLGKSEVAPSVGAGWPIQRSGPFRGAGGSDGQGLVVAAEESPAMSAAEALMTPKNSCCGNGGKPGSRENDRTMRTPVRRLSPDSGSSS-------FLYEAGTDSCPAIL-GSAD-GEDNSEDHFPLDVGGTESTSRRDSAAAAVVAE---EQGDLRIGPAFAACRGLRAPTAGNQARGSHRSAEGRRQVDSS---------------DVFAGG--AAAVAEFSSAWRRSKCFSFVLGSRDLRWLRNSGSGHGGGAGRGDR----RAWEYRRSWEALVASPALPVAPYTVPSGGEGGVPLSQRGHGESLRVVSGIAISFDGQTSRYLPLPPLLPSRSAAWHQSPSDCADHARRTSGGGSRVEPGSNGKG-VGVGRASARWG---ALPGGALESIALFVGFPWLCAGCGSERHSTRC--RSHSLADDGVDDGGGXXXXKRRRRKLRPWNQALLVCRRWNALGVEALNRLTAEEPSGRWGLLRDVMEEKNTTKVCLDMKGSLVCLRSLGVNVKGPLEDPAVARWLAEPPIEDTAQLQXXXXXXXXXXXXXXXXXXXXXRAPPASLALARPPVDVVDLWCLQAAATLSFMAEKEQALKDLSLTLPFFLLEMPAVSAAALMEYSGLTLKVGLVVGARREVELRLDDLERLAEQLAGDYEG------LSSPLMVSLDSRCLASGAALP-SW 1907
BLAST of mRNA_A-nodosum_M_contig10.78.88 vs. uniprot
Match: D7FM14_ECTSI (DNA polymerase I (POL I) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM14_ECTSI) HSP 1 Score: 496 bits (1277), Expect = 1.040e-153 Identity = 284/500 (56.80%), Postives = 345/500 (69.00%), Query Frame = 1
Query: 6208 MIASNPPLQNLEHKIRFKRSWRLSLAEEMEAEVPDLQAIPRVWAGQDGEDTARVGEES-RHGAMGSMQDASLRDALRVIVANTGESGGV-SFGAIVAIVEDRCLDDPVYRQQPASLPRPLASPPPPPSSADVGVQTAREMAKDGGVGEACAALGGESMASFWRKRGHPYTPWEASTTRQVLIRLGFQRGGDGGVGASAKAYSYPADKVFRMRASFLSEAKSEALQASAGCVPKHPWFGEEAVLRPRGALVPSQGYVFVSADYSQIEMRLMAHLSGDPDLLGVFADGGDVFRAIAAALQGGGKMAAHITDDERRQTKIVVYGVLYGQSAETLAPQLGVSRPRAWKIRETVLKTYPRLRDFLRRVKDDCKKRGFVETLLGRRRYLPHINSADAKERARAERQAANTVCQGSAADLLKLAATNVASRLERCEWMWKSRMAAKE---SPRNASRDAIDG--------EYSPPSRFSEDGGRSELARNPACRLVLSIHDELLYEV 7668
MI S+PPLQNL+HKI RSWR SLAEEME +VP L+ +PRVWA G D G + + + R+A+RV +A G++ + S G IVAIVED+CL+DPV+R DVG A + A+G SMAS WR+ GH Y+ WEA +TRQVL+RLG + G + YSYPADKVFR++A+F S+A +EA++ G + PWF +EA+++PR +LV S GY FVSADYSQ+EMRLMAHLSGDPDLL VFADGGDVFR IAAAL+G GK A IT++ERRQTKIVVYGVLYGQSA+ L PQL +SRP A+KIR+TVLKT+P+L +FL++VK+DCK+ G+VETLLGRRRYLP INS D ER+RAERQAANT QGSAADLLKLAATNVA+RLERCEWM SR A K P NA+ + + P RF DGGRS+LAR PACRLVLSIHDELLYE+
Sbjct: 1 MITSDPPLQNLDHKIVLTRSWRTSLAEEMEVDVPGLEIVPRVWADAKGGDPQPGGRGAVTPPRLSPEAEEEFREAVRVTLAPRGDAASMMSTGEIVAIVEDKCLNDPVHRHTDPDD--------------DVGNGPPAARAPED------PAVGAGSMASLWRESGHSYSSWEAESTRQVLVRLGGRHG---------RVYSYPADKVFRVQANFFSDANAEAMK-DGGLGARCPWFAKEAMIKPRDSLVASPGYAFVSADYSQVEMRLMAHLSGDPDLLKVFADGGDVFRTIAAALKGRGKKAEDITEEERRQTKIVVYGVLYGQSADALVPQLRLSRPEAFKIRQTVLKTFPKLTEFLKKVKEDCKECGYVETLLGRRRYLPQINSTDKAERSRAERQAANTTTQGSAADLLKLAATNVAARLERCEWM--SRPAGKPICTPPPNAAAGGTSSSALASGTADATVPCRFPRDGGRSQLARRPACRLVLSIHDELLYEL 468
BLAST of mRNA_A-nodosum_M_contig10.78.88 vs. uniprot
Match: W7U5L3_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U5L3_9STRA) HSP 1 Score: 404 bits (1039), Expect = 7.000e-110 Identity = 325/975 (33.33%), Postives = 474/975 (48.62%), Query Frame = 1
Query: 97 RGLGIEHLYPWQAKCLAEHGVAEGTRNLLYFAPTSGGKTMVAELLLLLRVMALPAYPEPERDRRQGGLGMEQQKGAVIGSSTGDSESGARKVVFVLPFISMVTEKVKHLQRVVAPYNRGRPRRQRIKVKALYGSKGGGRGGIRGTQIAVCTIEKANALINRMAVANELHELSCLVLDELHMIGEGSRGQTVELLLSKL--VRANRTAYEDKSEEVAAALTVSGDRSSESRPQPLPPPPQGNAADTSEEDVKNLRGKATGRMGRRTQIIGMSATLSNGAELAAWLGAILHVSDYRPVPLDERVLLGIHVYDKSGAVVRSFSEPAHPETDPDHVVTLCRESCIANDQVIIFCSTKQFCHNCAIKVAKNLGVSASKAVAAE-----------------RSALMVKLAKETCIGVDPILQETIPQGVAFHHAGLADTERAAIEAAFRAGTLGVLAATSTLGAGVNLPAGRVILRNLNGAGGGL-SATSYRQMAGRAGRKGAGRARGEAFLIASNKGQATKATALMNAGLAPVKSALKPSADGGAGLTKLVLEGVCGGLVKRESDLPEYLACSLLFHQQHDGVAR-ESLLDYAFAALQVLVDEACVELVPQIRPTVAAPXXXXXXXXXXXXXXXXXXIRPASGARQPGVKLPLISPYIRSGLRKIPQSASVAVPAGRASKVSAGICVNVVGMDDGRFKPTKLGMAIFRSSLGPAEGLMVYRDLSEAKHGINLRNTLRLAYLLTPLCPPSGLKPNWERLHALYSRAKAASAATQNPDRRSASLVDDFHRIGITEGHLHVWTSRGPSGATKQGPILSPDYVREVASVRRGSSAPVSRGRGDRVKASAAQ-------KAVRLVAAMILKDVSDGYN-LGQVAKSYGISKGDLQTLRQSTATFSSMVASFLKELGWTMFLMIVKGYVPRLSLGVSNNLLPLMQVPGMSRTEAGALYRGGIVNAKSLLAASNEKVAMALRMNVPF 2934
R GI Y WQ +CL GV G RNLLY APTSGGK+ VA++LLL R + +KV+ VLPF+++V EKV H + +V+ YN + RR+ ++++A +G+KGG G QI +CTIEKANAL+N+M +++LSCLV+DELHM+ + RG +ELLLSKL ++A + S+ LT D + +++ PL DV QIIG+SATL N E+A W+ A L + +RPV L E G ++ G +R P DPDH+ TL E+ QV++FC ++ C NCA +A+ LGV +A R AL+ L +E + V P L IP+G+AFHHAGL D E+ A+E AFR G L V+ ATSTLG G+NLPA RVI R L G + +SYRQMAGRAGR G + GE+ L+A + +AT LM L + S L P DGG L + +LE + G +++ DL +L C+L Q+ R S L YA AL+ LV+ V+ +P P+V A + + A +P + + + +A+ VP G V+ + P+KLG A+F+SS P EGL+V++DL A+ + L L L YL+TP+ P L P++ +L +Y RA+ +L+ F IG +E L W+ + P+ GP+L RG + P+ GR R+ + +A RL A+ L D++ L A +YG+ +G LQ L+QS A++ M+ SFL +LGWT+ ++ + L+PLMQ+P + + A ALY + ++ + E +A +R PF
Sbjct: 123 RRRGIVRPYDWQCQCLQTPGVVTGERNLLYSAPTSGGKSFVADVLLLRRAIHT-----------------------------------RKKVLLVLPFVAVVREKVAHFKSLVSVYNARKRRREALRIQAFHGNKGGR--GFGRCQIGICTIEKANALVNKMIQEGSINQLSCLVVDELHMMADQQRGYLLELLLSKLKFIKALQHCRRGPSD-----LTT--DAAIDNQGPPL--------------DV---------------QIIGLSATLPNLEEVADWMDAALFHTSFRPVELQEMYKWGDALFAADGVCLRRLQSRRPPAEDPDHITTLVEETTRRGHQVLVFCHYRKHCENCATLLAEQLGVLPGAIMANAMTRQKKEDKESDDTVKMRKALLDDL-REHSMSVHPCLLLAIPKGIAFHHAGLTDHEKNALEEAFRRGVLSVIVATSTLGTGINLPAARVIFRTLRPGGNRVFDISSYRQMAGRAGRAGQQKY-GESILLARSPQDVKEATRLMTEPLHDLHSCLDPEQDGGRALVRAILEAIASGSLQKNDDLDIFLHCTLALRQRIRHSPRLNSFLYYARDALRYLVEHRIVKQLPG--PSVNA------------------EVSTSQRAEH--------TPEQKE--QTVMSTAAPPVP-------DIGSTVSTL------LSPSKLGHALFKSSFAPDEGLLVFQDLKHAQQRLVLDGNLHLIYLVTPVFHP--LLPDYNQLWKIYDRARRTDPVK--------ALI--FELIGFSEALLDRWSHQQPASGVLIGPLLHLGSSEAGNHTARGLAQPI--GRSIRMATGVVEGEQLMIMRARRLWGALALHDLAVAERPLDATAATYGVDRGSLQALQQSAASYVGMIQSFLTQLGWTLLSRALEEAGTAVGGEQVKELMPLMQIPRLELSLARALYDTDVRTVAAVCSEPVEHLADIIRKIRPF 965
BLAST of mRNA_A-nodosum_M_contig10.78.88 vs. uniprot
Match: UPI00148693F2 (LOW QUALITY PROTEIN: DNA polymerase theta n=1 Tax=Cyclopterus lumpus TaxID=8103 RepID=UPI00148693F2) HSP 1 Score: 364 bits (935), Expect = 2.520e-97 Identity = 299/976 (30.64%), Postives = 434/976 (44.47%), Query Frame = 1
Query: 49 IFRRWGLDAALRRYYDRGLGIEHLYPWQAKCLAEHGVAEGTRNLLYFAPTSGGKTMVAELLLLLRVMALPAYPEPERDRRQGGLGMEQQKGAVIGSSTGDSESGARKVVFVLPFISMVTEKVKHLQRVVAPYNRGRPRRQRIKVKALYGSKGGGRGGIRGTQIAVCTIEKANALINRMAVANELHELSCLVLDELHMIGEGSRGQTVELLLSKLVRANRTAYEDKSEEVAAALTVSGDRSSESRPQPLPPPPQGNAADTSEEDVKNLRGKATGRMGRRTQIIGMSATLSNGAELAAWLGAILHVSDYRPVPLDERVLLGIHVYDKSGAVVRSFSEPAHPETDPDHVVTLCRESCIANDQVIIFCSTKQFCHNCAIKVAKNL---------GVSASKAVAAERSALMVKLA--KETCIGVDPILQETIPQGVAFHHAGLADTERAAIEAAFRAGTLGVLAATSTLGAGVNLPAGRVILRNLNGAGGGLSATSYRQMAGRAGRKGAGRARGEAFLIASNKGQATKATALMNAGLAPVKSALKPSADGGA--GLTKLVLEGVCGGLVKRESDLPEYLACSLLFHQQHDGVARESLLDYAFAALQVLVDEACVELVPQIRPTVAAPXXXXXXXXXXXXXXXXXXIRPASGARQPGVKLPLISPYIRSGLRKIPQSASVAVPAGRASKVSAGICVNVVGMDDGRFKPTKLGMAIFRSSLGPAEGLMVYRDLSEAKHGINLRNTLRLAYLLTPLCPPSGLKPNWERLHALYSRAKAASAATQNPDRRSASLVDDFHRIGITEGHLHVWTSRGPSGATKQGPILSPDYVREVASVRRGSSAPVSRGRGDRVKASAAQKAVRLVAAMILKDVSDGYNLGQVAKSYGISKGDLQTLRQSTATFSSMVASFLKELGWTMFLMIVKGYVPRLSLGVSNNLLPLMQVPGMSRTEAGALYRGGIVNAKSLLAASNEKVAMALRMNVPFR 2937
+ WGL + Y + G+ H++ WQA+CLA +G NL+Y APTS GKT+V+ELL+L RV+ RK +F+LPF+S+ EK+ + Q V ++V+ GS GG +AVCTIEKAN+LINR+ + + L +V+DELHM+G+ RG +ELLL+K+ + + ATG + QI+GMSATL N A LA+WLGA L+ +DYRPVPL E + +G ++YDKS AVVR F H + D DH+V+LC E+ V++FC +K +C +A+ + K V+ +R L+ +A + T G+DP+L+ T+P GVAFHHAGL ER +E AFR GT+ VLAATSTL +GVNLPA RVI+R G L +Y+QMAGRAGRKG GE+ L+ + + K +L+ L P+ S L G + + +LE + GG+ D+ Y CSLL +ES + A+ EACVE + + + I + G + R+ PT+LG A SSL P E L ++ DL A G L N L + YL+TPL +W + L+ + ++ +R A LV G+ EG L +R G + + R ++ + R ++L+D+ + LG VA Y ++G LQ+L+QS +T++ MV F K LGW +++ Y RLS GV L+ L++V ++ T A ALY G+ L A+ V ALR VPF+
Sbjct: 276 LLCNWGLPKPVLERYQKH-GVTHMFEWQAQCLAVGQALQGG-NLVYSAPTSAGKTLVSELLMLKRVLETK-----------------------------------RKALFILPFVSVAKEKMHYFQSVFGEAG--------VRVEGYMGSTSAA-GGFTALDVAVCTIEKANSLINRLIEEDSMGLLGMVVVDELHMVGDSGRGYLLELLLTKIRYIAQ------------------------------------------------KQNATGSLSEGVQIVGMSATLPNLALLASWLGAELYQTDYRPVPLQEHLKVGCNIYDKSLAVVRRFVPALHVKGDDDHIVSLCYETVREGRSVLLFCPSKIWCEKLVDSIAREFYNLRHTDRQAEAEPKPVSLDRDGLVDVVAQLRRTPAGLDPVLKRTVPWGVAFHHAGLTFDERDVLEGAFRQGTVKVLAATSTLSSGVNLPARRVIIRTPTFNGHLLDPLTYKQMAGRAGRKGVDTI-GESVLVCK-EAERQKGISLLKGALQPISSCLVRREGEGVTTSMLRAILEIIVGGVASTPQDVRSYALCSLLAASMKCDGKKESSEETNKGAI-----EACVEWLME----------------------------------------------------------------------NEFISIQKDGQEQ-RYHPTQLGAATLSSSLSPPEALGIFADLQRAMKGFVLENDLHILYLITPLYA-EWTTIDWYQFFCLWEQLSSSM-------KRVAELV------GVQEGFL----ARSVGGKL----VAKTEKQRRQMAIHK-----------------------RFFTTLVLQDLVNEVPLGTVASKYNCNRGQLQSLQQSASTYAGMVTVFCKRLGWHNMELLLSQYQTRLSFGVQRELVDLVRVSLLNATRARALYAQGLCTVAELARATLADVEKALRNAVPFK 1034
BLAST of mRNA_A-nodosum_M_contig10.78.88 vs. uniprot
Match: A0A4U5U329_COLLU (DNA-directed DNA polymerase n=3 Tax=Sciaenidae TaxID=30870 RepID=A0A4U5U329_COLLU) HSP 1 Score: 363 bits (931), Expect = 6.920e-97 Identity = 302/986 (30.63%), Postives = 441/986 (44.73%), Query Frame = 1
Query: 19 RPPPSTSLEEIFRRWGLDAALRRYYDRGLGIEHLYPWQAKCLAEHGVAEGTRNLLYFAPTSGGKTMVAELLLLLRVMALPAYPEPERDRRQGGLGMEQQKGAVIGSSTGDSESGARKVVFVLPFISMVTEKVKHLQRVVAPYNRGRPRRQRIKVKALYGSKGGGRGGIRGTQIAVCTIEKANALINRMAVANELHELSCLVLDELHMIGEGSRGQTVELLLSKLVRANRTAYEDKSEEVAAALTVSGDRSSESRPQPLPPPPQGNAADTSEEDVKNLRGKATGRMGRRTQIIGMSATLSNGAELAAWLGAILHVSDYRPVPLDERVLLGIHVYDKSGAVVRSFSEPAHPETDPDHVVTLCRESCIANDQVIIFCSTKQFCHNCAIKVAKNL---------GVSASKAVAAERSALMVKLA--KETCIGVDPILQETIPQGVAFHHAGLADTERAAIEAAFRAGTLGVLAATSTLGAGVNLPAGRVILRNLNGAGGGLSATSYRQMAGRAGRKGAGRARGEAFLIASNKGQATKATALMNAGLAPVKSALKPSADGGA--GLTKLVLEGVCGGLVKRESDLPEYLACSLLFHQQHDGVARESLLDYAFAALQVLVDEACVELVPQIRPTVAAPXXXXXXXXXXXXXXXXXXIRPASGARQPGVKLPLISPYIRSGLRKIPQSASVAVPAGRASKVSAGICVNVVGMDDGRFKPTKLGMAIFRSSLGPAEGLMVYRDLSEAKHGINLRNTLRLAYLLTPLCPPSGLKPNWERLHALYSRAKAASAATQNPDRRSASLVDDFHRIGITEGHLHVWTSRGPSGATKQGPILSPDYVREVASVRRGSSAPVSRGRGDRVKASAAQKAVRLVAAMILKDVSDGYNLGQVAKSYGISKGDLQTLRQSTATFSSMVASFLKELGWTMFLMIVKGYVPRLSLGVSNNLLPLMQVPGMSRTEAGALYRGGIVNAKSLLAASNEKVAMALRMNVPFR 2937
R P + + + + WGL + Y + G+ H++ WQA+CL V +G NL+Y APTS GKT+V+ELL+L RV+ RK +F+LPF+S+ EK+ +LQ V I+V+ GS GG +AVCTIEKAN+L+NR+ + + L +V+DELHM+G+ RG +ELLL+K+ + + TG + QI+GMSATL N + LA WLGA L+ +DYRPVPL E + +G ++YDKS +VVR F+ H + D DH+V+LC E+ V++FC +K +C A +A+ G + + V+ ++ L+ LA + T G+DPILQ T+P GVAFHHAGL ER +E AFR G + VLAATSTL +GVNLPA RVI+R G L +Y+QMAGRAGRKG GE+ L+ + + K +L+ L P+ S L G + + +LE + GG+ D+ Y +CSLL +ES + A+ EACVE + + I + G ++ R+ PT+LG A SSL P E L V+ DL A G L N L + YL+TPL +W + L+ + ++ +R A LV G+ EG L +R SG + + R ++ + R ++L+D+ + LG VA Y ++G LQ+L+QS +T++ MV F K LGW +++ Y RLS GV L+ L++V ++ T A LY G+ L A+ V ALR VPF+
Sbjct: 234 RAPAAHAEKLLLSSWGLPKPVLERYQKH-GVTHMFEWQAQCLTVGQVLQGG-NLVYSAPTSAGKTLVSELLMLKRVLETK-----------------------------------RKALFILPFVSVAKEKMHYLQSVFEEAG--------IRVEGYMGSTSAA-GGFTSLDMAVCTIEKANSLVNRLIEEDSMGLLGMVVVDELHMVGDSGRGYLLELLLTKIRYIAQ------------------------------------------------KQNTTGSLSEGVQIVGMSATLPNLSLLAGWLGAELYQTDYRPVPLQEHLKVGCNIYDKSLSVVRQFTPALHIKGDDDHIVSLCYETVKEGRSVLLFCPSKNWCEKLADSIAREFYNLRRADRQGEAEPQPVSLDQEGLVDVLAQLRRTPAGLDPILQRTVPWGVAFHHAGLTFDERDVLEGAFRQGMVRVLAATSTLSSGVNLPARRVIIRTPTFNGHLLDPLTYKQMAGRAGRKGVDTT-GESVLVCK-EAERQKGISLLRGALQPISSCLVRREGEGVTTSMLRAILEIIVGGVASTPLDVRLYASCSLLAASMKCDGKKESNEETNKGAI-----EACVEWLMD----------------------------------------------------------------------NEFISIQKDGEEE-RYCPTQLGGATLSSSLSPPEALGVFADLQRAMKGFVLENDLHILYLITPLYA-EWTTIDWYQFFCLWEQLSSSM-------KRVAELV------GVQEGFL----ARSVSGKL----VAKTEKQRRQMAIHK-----------------------RFFTTLVLQDLVNEVPLGTVASKYNCNRGQLQSLQQSASTYAGMVTVFCKRLGWHNMELLLSQYQTRLSFGVQRELVDLVRVSLLNATRARTLYAQGLCTVAELARATVADVEKALRNAVPFK 1002
BLAST of mRNA_A-nodosum_M_contig10.78.88 vs. uniprot
Match: UPI001886F0D0 (DNA polymerase theta n=1 Tax=Pungitius pungitius TaxID=134920 RepID=UPI001886F0D0) HSP 1 Score: 362 bits (930), Expect = 9.100e-97 Identity = 304/984 (30.89%), Postives = 438/984 (44.51%), Query Frame = 1
Query: 28 PSTSLEEIFR-RWGLDAALRRYYDRGLGIEHLYPWQAKCLAEHGVAEGTRNLLYFAPTSGGKTMVAELLLLLRVMALPAYPEPERDRRQGGLGMEQQKGAVIGSSTGDSESGARKVVFVLPFISMVTEKVKHLQRVVAPYNRGRPRRQRIKVKALYGSKGGGRGGIRGTQIAVCTIEKANALINRMAVANELHELSCLVLDELHMIGEGSRGQTVELLLSKLVRANRTAYEDKSEEVAAALTVSGDRSSESRPQPLPPPPQGNAADTSEEDVKNLRGKATGRMGRRTQIIGMSATLSNGAELAAWLGAILHVSDYRPVPLDERVLLGIHVYDKSGAVVRSFSEPAHPETDPDHVVTLCRESCIANDQVIIFCSTKQFCHNCAIKVAKNL---------GVSASKAVAAERSALMVKLA--KETCIGVDPILQETIPQGVAFHHAGLADTERAAIEAAFRAGTLGVLAATSTLGAGVNLPAGRVILRNLNGAGGGLSATSYRQMAGRAGRKGAGRARGEAFLIASNKGQATKATALMNAGLAPVKSAL-KPSADG-GAGLTKLVLEGVCGGLVKRESDLPEYLACSLLFHQQHDGVARESLLDYAFAALQVLVDEACVELVPQIRPTVAAPXXXXXXXXXXXXXXXXXXIRPASGARQPGVKLPLISPYIRSGLRKIPQSASVAVPAGRASKVSAGICVNVVGMDDGRFKPTKLGMAIFRSSLGPAEGLMVYRDLSEAKHGINLRNTLRLAYLLTPLCPPSGLKPNWERLHALYSRAKAASAATQNPDRRSASLVDDFHRIGITEGHLHVWTSRGPSGATKQGPILSPDYVREVASVRRGSSAPVSRGRGDRVKASAAQKAVRLVAAMILKDVSDGYNLGQVAKSYGISKGDLQTLRQSTATFSSMVASFLKELGWTMFLMIVKGYVPRLSLGVSNNLLPLMQVPGMSRTEAGALYRGGIVNAKSLLAASNEKVAMALRMNVPFR 2937
P+ E++ WGL A+ Y + G+ H++ WQA+CLA +G NL+Y APTS GKT+V+ELL+L RV+ RK +F+LPF+S+ EK+ +L+ V ++V+ GS GG +AVCTIEKAN+LINR+ + + L +V+DELHM+G+ RG +ELLL+K+ + + ATG + QI+GMSATL N A LA+WLGA L+ +DYRPVPL E + +G VYDKS AVVR F+ + D DH+V+LC E+ V++FC +K +C + +A+ G + K V +R L+ +A + T G+DP LQ T+P GVAFHHAGL ER +E AFR T+ VLAATSTL +GVNLPA RVI+R+ G L +Y+QMAGRAGRKG GE+ L+ + + K L+ L P+ S L + DG + + +LE + GG+ D+ Y CSLL +E D A+ EACVE + + + I + G ++ R+ PT+LG A SSL P E L ++ DL A G L N L + YL+TPL +W + + + ++ +R A LV G+ EG L +R G + + R +V + R ++L D+ + LG VA Y ++G LQ+L+QS +T++ MV F K LGW +++ Y RLS GV L+ L++V ++ T A ALY G+ L A+ V ALR VPF+
Sbjct: 267 PAGQAEKLLLCNWGLPKAVLACYQKH-GVTHMFEWQAQCLAAGQALQGG-NLVYSAPTSAGKTLVSELLMLKRVLETK-----------------------------------RKALFILPFVSVAKEKMHYLRSVFEEAG--------VRVEGYMGSTSAA-GGFAALDVAVCTIEKANSLINRLIEEDNMALLGMVVVDELHMVGDSGRGYLLELLLTKIRYIAQ------------------------------------------------KQNATGSLSEGVQIVGMSATLPNLALLASWLGAELYQTDYRPVPLHEHLKVGRDVYDKSLAVVRRFTPALRVKGDDDHIVSLCYETVSEGRSVLLFCPSKNWCEKLSDSIAREFYNLRHTDRRGEAEPKPVGLDREGLVDVVAQLRRTPAGLDPTLQRTVPWGVAFHHAGLTFDERDVLEGAFRQSTIKVLAATSTLSSGVNLPARRVIIRSPTFNGHLLDPLTYKQMAGRAGRKGVDTI-GESVLVCK-EAERQKGIILLKGALQPISSCLVRREGDGVTTSMLRAILEIIVGGVASTPQDVRSYALCSLLAASIKSNGKKEPTEDTNKGAI-----EACVEWLME----------------------------------------------------------------------NEFISIQKDGQEE-RYHPTQLGAATLSSSLSPPEALGIFADLQRAMKGFVLENDLHILYLITPLYA-EWTTIDWYQFFCQWEQLSSSM-------KRVAELV------GVQEGFL----ARSVGGKL----VAKTEKQRRQMAVHK-----------------------RFFTTLVLHDLVNEVPLGAVASKYNCNRGQLQSLQQSASTYAGMVMVFSKRLGWHNMELLLSQYQTRLSFGVQRELVDLVRVSLLNATRARALYAQGLCTVAELARATVADVEKALRNAVPFK 1033
BLAST of mRNA_A-nodosum_M_contig10.78.88 vs. uniprot
Match: UPI00145B0685 (DNA polymerase theta n=1 Tax=Periophthalmus magnuspinnatus TaxID=409849 RepID=UPI00145B0685) HSP 1 Score: 361 bits (927), Expect = 1.990e-96 Identity = 302/984 (30.69%), Postives = 435/984 (44.21%), Query Frame = 1
Query: 28 PSTSLEEIF-RRWGLDAALRRYYDRGLGIEHLYPWQAKCLAEHGVAEGTRNLLYFAPTSGGKTMVAELLLLLRVMALPAYPEPERDRRQGGLGMEQQKGAVIGSSTGDSESGARKVVFVLPFISMVTEKVKHLQRVVAPYNRGRPRRQRIKVKALYGSKGGGRGGIRGTQIAVCTIEKANALINRMAVANELHELSCLVLDELHMIGEGSRGQTVELLLSKLVRANRTAYEDKSEEVAAALTVSGDRSSESRPQPLPPPPQGNAADTSEEDVKNLRGKATGRMGRRTQIIGMSATLSNGAELAAWLGAILHVSDYRPVPLDERVLLGIHVYDKSGAVVRSFSEPAHPETDPDHVVTLCRESCIANDQVIIFCSTKQFCHNCAIKVAKNLGVSASKAVAAERSALMVKL-----------AKETCIGVDPILQETIPQGVAFHHAGLADTERAAIEAAFRAGTLGVLAATSTLGAGVNLPAGRVILRNLNGAGGGLSATSYRQMAGRAGRKGAGRARGEAFLIASNKGQATKATALMNAGLAPVKSALKPSADGGA--GLTKLVLEGVCGGLVKRESDLPEYLACSLLFHQQHDGVARESLLDYAFAALQVLVDEACVELVPQIRPTVAAPXXXXXXXXXXXXXXXXXXIRPASGARQPGVKLPLISPYIRSGLRKIPQSASVAVPAGRASKVSAGICVNVVGMDDGRFKPTKLGMAIFRSSLGPAEGLMVYRDLSEAKHGINLRNTLRLAYLLTPLCPPSGLKPNWERLHALYSRAKAASAATQNPDRRSASLVDDFHRIGITEGHLHVWTSRGPSGATKQGPILSPDYVREVASVRRGSSAPVSRGRGDRVKASAAQKAVRLVAAMILKDVSDGYNLGQVAKSYGISKGDLQTLRQSTATFSSMVASFLKELGWTMFLMIVKGYVPRLSLGVSNNLLPLMQVPGMSRTEAGALYRGGIVNAKSLLAASNEKVAMALRMNVPFR 2937
P E++F WGL + Y + LG+ H++ WQA+CLA V G NL+Y APTS GKT+V+ELL+L RV+ RK +F+LPF+S+ EK+ +LQ V ++V+ GS GG +AVCTIEKAN+LINR+ N + L +V+DELHM+G+ RG +ELLL+K+ +L+ TG QI+GMSATL N + LA WLGA L+ +DYRPVPL+E + +G ++Y+KS +V+R F+ + D DH+V+LC E+ V++FC +K +C A +A+ K ER + V L K T G+DPILQ T+P GV FHHAGL ER +E AFR + VL ATSTL +GVNLPA RVI+R G L +Y+QMAGRAGRKG GE+ L+ + + K L+ L P++S L G + + +LE V GG+ + D+ Y +CSLL L + RPT +GA + V+ + + +I ++ ++ R+ PT+LG A SSL P E L ++ DL A G L N L + YL+TPL +W + L+ + ++ +R A LV GI EG L +R SG + + ++ + R ++L D+ + LG VA Y ++G LQ+L+QS +T++ MV F K LGW +++ Y RLS GV L+ L++V ++ T A ALY G+ L A+ E V ALR VPF+
Sbjct: 276 PEEQAEKLFLSSWGLPKPVLDRYHK-LGVTHMFEWQAQCLAVGRVLHGG-NLVYSAPTSAGKTLVSELLMLKRVLETK-----------------------------------RKALFILPFVSVAKEKMHYLQNVFEEAG--------VRVEGYMGSTSAA-GGFSSLDVAVCTIEKANSLINRLIEENNMGLLGMVVVDELHMVGDSGRGYLLELLLTKI------------------------------------------------QYLSLKQNITGSHSGSVQIVGMSATLPNLSLLAKWLGADLYQTDYRPVPLEEHLKIGSNIYNKSLSVIRQFTPALSIKGDDDHIVSLCYETVSEGHSVLLFCPSKNWCEKLADGIAREFYNLQHKKTHCERDSQPVTLNLEGLEEVVAQLKRTPAGLDPILQRTVPWGVGFHHAGLTFDERDVLEGAFRQSIVRVLCATSTLSSGVNLPARRVIIRTPTFNGRILDPLTYKQMAGRAGRKGVDTT-GESVLVCK-EAERQKGITLLRGDLQPIRSCLVKREGEGVTTSMLRAILEIVVGGVASKPQDVRLYASCSLL----------------------------AASLKCEGRPTNEETN---------------------TGAIEACVEWLMDNEFI-----------------------------SIQKEEEERYCPTQLGAATLSSSLSPPEALKIFADLQRAMKGFVLENDLHILYLITPLYA-EWTTIDWYQFFCLWEQLSSSM-------KRVAELV------GIQEGFL----ARSVSGKL----VAKTEKQHRQMAIHK-----------------------RFFTTLVLHDLVNEVPLGTVASKYNCNRGQLQSLQQSASTYAGMVTVFCKRLGWYNLELLLSQYQTRLSFGVQRELVDLVRVSLLNATRARALYAQGLCTVAELARATVENVEKALRNAVPFK 1040
BLAST of mRNA_A-nodosum_M_contig10.78.88 vs. uniprot
Match: UPI00147130DF (DNA polymerase theta isoform X1 n=2 Tax=Thalassophryne amazonica TaxID=390379 RepID=UPI00147130DF) HSP 1 Score: 360 bits (924), Expect = 4.930e-96 Identity = 306/978 (31.29%), Postives = 443/978 (45.30%), Query Frame = 1
Query: 49 IFRRWGLDAALRRYYDRGLGIEHLYPWQAKCLAEHGVAEGTRNLLYFAPTSGGKTMVAELLLLLRVMALPAYPEPERDRRQGGLGMEQQKGAVIGSSTGDSESGARKVVFVLPFISMVTEKVKHLQRVVAPYNRGRPRRQRIKVKALYGSKGGGRGGIRGTQIAVCTIEKANALINRMAVANELHELSCLVLDELHMIGEGSRGQTVELLLSKLVRANRTAYEDKSEEVAAALTVSGDRSSESRPQPLPPPPQGNAADTSEEDVKNLRGKATGRMGRRTQIIGMSATLSNGAELAAWLGAILHVSDYRPVPLDERVLLGIHVYDKSGAVVRSFSEPAHPETDPDHVVTLCRESCIANDQVIIFCSTKQFCHNCAIKVAK---NLGVSASKA------VAAERSALMVKLA--KETCIGVDPILQETIPQGVAFHHAGLADTERAAIEAAFRAGTLGVLAATSTLGAGVNLPAGRVILRNLNGAGGGLSATSYRQMAGRAGRKGAGRARGEAFLIASNKGQATKATALMNAGLAPVKSAL-KPSADG-GAGLTKLVLEGVCGGLVKRESDLPEYLACSLLFHQQHDGVARESLLDYAFAALQVLVDEACVELVPQIRPTVAAPXXXXXXXXXXXXXXXXXXIRPASGARQPGVKLPLISPYIRSGLRKIPQSASVAVPAGRASKVSAGICVNVVGMDDGRFKPTKLGMAIFRSSLGPAEGLMVYRDLSEAKHGINLRNTLRLAYLLTPLCPPSGLKPNWERLHALYSRAKAASAATQNPDRRSASLVDDFHRIGITEGHLHVWTSRGPSGATKQGPILSPDYVREVASVRRGSSAPVSRGRGDRVKASAAQKAV--RLVAAMILKDVSDGYNLGQVAKSYGISKGDLQTLRQSTATFSSMVASFLKELGWTMFLMIVKGYVPRLSLGVSNNLLPLMQVPGMSRTEAGALYRGGIVNAKSLLAASNEKVAMALRMNVPFR 2937
+ WGL + Y + G+ ++ WQA+CLA V +G NL+Y APTS GKT+V+ELL+L RV+ RK +F+LPF+S+ EK+ +LQ V ++V+ GS GG +AVCTIEKAN+LINR+ N + L +V+DELHM+G+ RG +ELLL+K+ + + ATG + QIIGMSATL N + LA+WLGA L+ +DYRPVPL E + +G +++DKS ++VR FS + D DH+V+LC E+ V++FC +K +C A +A+ NL + + V ++ L+ +A + T G+D ILQ T+P GVAFHHAGL ER +E AFR G + VLAATSTL +GVNLPA RVI+R G L +Y+QMAGRAGRKG GE+ L+ + + K L+ L P+ S L K DG + + +LE + GG+ D+ Y +CSLL +ES + A+ E+CVE + + + +IR ++ G D+ R+ PT+LG A SSL P E L ++ DL A G L N L + YL+TPL +W + L+ + ++ +R A LV G+ EG L +R SG +V + RR Q A+ R ++L+D+ LG VA Y S+G LQ+L+QS +T++ MV F + LGW +++ Y RLS GV L+ L++V ++ T A ALY G+ L A+ V ALR +PF+
Sbjct: 284 LLSSWGLPKPVLERYQKH-GVTRMFEWQAQCLAVGQVLQGG-NLVYSAPTSAGKTLVSELLMLKRVLETK-----------------------------------RKALFILPFVSVAKEKMHYLQSVFQEAG--------VRVEGYMGSTSAA-GGFTTLDVAVCTIEKANSLINRLIQENNMDLLGVVVVDELHMVGDSGRGYLLELLLTKIHYIVQ------------------------------------------------KQNATGSLSEGVQIIGMSATLPNLSVLASWLGAELYQTDYRPVPLQEHLKVGSNIFDKSLSLVRQFSPALRVKDDDDHIVSLCYETVTEGHSVLLFCPSKNWCEKLADSIAREFFNLRHTEGRRDVETQPVNLDQEGLVDVIAQLRRTPAGLDTILQRTVPWGVAFHHAGLTFDERDVLEGAFRQGLIRVLAATSTLSSGVNLPARRVIIRTPTFNGHVLDPLTYKQMAGRAGRKGVDTT-GESVLVCK-EAERQKGIVLLQGSLQPISSCLVKREGDGVTTSMLRAILEIIVGGVASSPQDVRSYASCSLLAATMKCDDKKESDAETNKGAI-----ESCVEWLME-------------------------------------------NEFIR---------------------------IDRDGKDE-RYCPTQLGAATLSSSLSPPEALGIFADLQRAMKGFVLENDLHILYLITPLYA-EWTTIDWYQFFCLWEQLSSSM-------KRVAELV------GVQEGFL----ARSVSGK----------HVAKTEKQRR-------------------QMAIHKRFFTTLVLQDLVMEVPLGTVASKYNCSRGQLQSLQQSASTYAGMVMVFCRRLGWHNMELLLSQYQTRLSFGVQRELVDLVRVSLLNATRARALYAQGLCTVAELARATVSDVEKALRNAIPFK 1042
BLAST of mRNA_A-nodosum_M_contig10.78.88 vs. uniprot
Match: UPI000A1C4D3E (LOW QUALITY PROTEIN: DNA polymerase theta n=1 Tax=Boleophthalmus pectinirostris TaxID=150288 RepID=UPI000A1C4D3E) HSP 1 Score: 360 bits (923), Expect = 5.370e-96 Identity = 298/971 (30.69%), Postives = 432/971 (44.49%), Query Frame = 1
Query: 49 IFRRWGLDAALRRYYDRGLGIEHLYPWQAKCLAEHGVAEGTRNLLYFAPTSGGKTMVAELLLLLRVMALPAYPEPERDRRQGGLGMEQQKGAVIGSSTGDSESGARKVVFVLPFISMVTEKVKHLQRVVAPYNRGRPRRQRIKVKALYGSKGGGRGGIRGTQIAVCTIEKANALINRMAVANELHELSCLVLDELHMIGEGSRGQTVELLLSKLVRANRTAYEDKSEEVAAALTVSGDRSSESRPQPLPPPPQGNAADTSEEDVKNLRGKATGRMGRRTQIIGMSATLSNGAELAAWLGAILHVSDYRPVPLDERVLLGIHVYDKSGAVVRSFSEPAHPETDPDHVVTLCRESCIANDQVIIFCSTKQFCHNCAIKVAKNL----GVSASKAVAAERSAL--MVKLAKETCIGVDPILQETIPQGVAFHHAGLADTERAAIEAAFRAGTLGVLAATSTLGAGVNLPAGRVILRNLNGAGGGLSATSYRQMAGRAGRKGAGRARGEAFLIASNKGQATKATALMNAGLAPVKSALKPSADGGA--GLTKLVLEGVCGGLVKRESDLPEYLACSLLFHQQHDGVARESLLDYAFAALQVLVDEACVELVPQIRPTVAAPXXXXXXXXXXXXXXXXXXIRPASGARQPGVKLPLISPYIRSGLRKIPQSASVAVPAGRASKVSAGICVNVVGMDDGRFKPTKLGMAIFRSSLGPAEGLMVYRDLSEAKHGINLRNTLRLAYLLTPLCPPSGLKPNWERLHALYSRAKAASAATQNPDRRSASLVDDFHRIGITEGHLHVWTSRGPSGATKQGPILSPDYVREVASVRRGSSAPVSRGRGDRVKASAAQKAVRLVAAMILKDVSDGYNLGQVAKSYGISKGDLQTLRQSTATFSSMVASFLKELGWTMFLMIVKGYVPRLSLGVSNNLLPLMQVPGMSRTEAGALYRGGIVNAKSLLAASNEKVAMALRMNVPFR 2937
+ WGL + Y + LG+ H++ WQA+CLA V G NL+Y APTS GKT+V+ELL+L RV+ RK +F+LPF+S+ EK+ +LQ V ++V+ GS GG +AVCTIEKAN+LINR+ + + L +V+DELHM+G+ RG +ELLL+K+ +L+ TG + QI+GMSATL N + LA WLGA L+ +DYRPVPL E + +G ++Y+KS +V+R F+ + D DH+V+LC E+ V++FC +K +C A +A+ S K V L +V K T G+DP+LQ T+P GV FHHAGL ER +E AFR + VLAATSTL +GVNLPA RVI+R G L +Y+QMAGRAGRKG GE+ L+ + + K L+ L P++S L G + + +LE + GG+ + D+ Y +C+LL L + RPT GA + V+ + + +I N+ ++ R+ PT+LG A SSL P E L ++ DL A G L N L + YL+TPL +W + L+ + ++ +R A LV GI EG L +R SG + + R ++ + R ++L D+ + LG VA Y ++G LQ+L+QS +T++ MV F K LGW +++ Y RLS GV L+ L++V ++ T A ALY G+ L A+ E V ALR VPF+
Sbjct: 109 LLSSWGLPKPVLDRYCK-LGVTHMFEWQAQCLAVGHVLHGG-NLVYSAPTSAGKTLVSELLMLKRVLETK-----------------------------------RKALFILPFVSVAKEKMHYLQNVFEEVG--------VRVEGYMGSTAAA-GGFSSLDVAVCTIEKANSLINRLIEEDNMGLLGIVVVDELHMVGDSGRGYLLELLLTKI------------------------------------------------QYLSLKQNLTGSLSEGVQIVGMSATLPNLSLLAKWLGAELYQTDYRPVPLQEHLKIGSNIYNKSLSVIRHFTPALSVKGDDDHIVSLCYETVSEGHSVLLFCPSKNWCEKLADSIAREFYNLHHKSRCKPVTLNIEGLEEVVAQLKRTPAGLDPVLQRTVPWGVGFHHAGLTFDERDVLEGAFRQSIVRVLAATSTLSSGVNLPARRVIIRTPTFNGHILDPLTYKQMAGRAGRKGVDTT-GESVLVCK-EAERQKGITLLKGDLQPIRSCLVKREGEGVTTSMLRAILEIIVGGVASKPQDVRLYASCTLL----------------------------AASLKCEGRPTNEETN---------------------QGAIEACVEWLMDNEFI-----------------------------NIQKEEEERYCPTQLGAATLSSSLSPPEALGIFADLQRAMKGFVLENDLHILYLITPLYA-EWTTIDWYQFFCLWEQLSSSM-------KRVAELV------GIQEGFL----ARSVSGKL----VAKTEKQRRQMAIHK-----------------------RFFTTLVLHDLVNEVPLGTVASKYNCNRGQLQSLQQSASTYAGMVTVFCKRLGWHNLELLLSQYQTRLSFGVQRELVDLVRVSLLNATRARALYAQGLCTVAELARATVENVQKALRNAVPFK 860 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig10.78.88 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig10.78.88 >prot_A-nodosum_M_contig10.78.88 ID=prot_A-nodosum_M_contig10.78.88|Name=mRNA_A-nodosum_M_contig10.78.88|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=2602bp PATEIPRPPPSTSLEEIFRRWGLDAALRRYYDRGLGIEHLYPWQAKCLAEback to top mRNA from alignment at A-nodosum_M_contig10:796117..825368+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig10.78.88 ID=mRNA_A-nodosum_M_contig10.78.88|Name=mRNA_A-nodosum_M_contig10.78.88|organism=Ascophyllum nodosum dioecious|type=mRNA|length=29252bp|location=Sequence derived from alignment at A-nodosum_M_contig10:796117..825368+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig10:796117..825368+ >mRNA_A-nodosum_M_contig10.78.88 ID=mRNA_A-nodosum_M_contig10.78.88|Name=mRNA_A-nodosum_M_contig10.78.88|organism=Ascophyllum nodosum dioecious|type=CDS|length=7806bp|location=Sequence derived from alignment at A-nodosum_M_contig10:796117..825368+ (Ascophyllum nodosum dioecious)back to top |