mRNA_A-nodosum_M_contig10.53.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig10.53.1 vs. uniprot
Match: D7FM24_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM24_ECTSI) HSP 1 Score: 239 bits (610), Expect = 1.520e-75 Identity = 111/135 (82.22%), Postives = 126/135 (93.33%), Query Frame = 1
Query: 1 ALPGPLFNLSAYLGAVYKGVPGAFVGWVSLFGPGVMLIFGLLPFWGTVRKIAWFKIFLQGVNSTAIGLVIAACVLLWGSAVDTYADAIVAVVAGCMQSFLGYQAPWCIVGGGVLGWLLSDSVTSLAQEVFYPSEG 405
ALPGPLFNLSAYLGAVY+GVPGAFVGW+ LFGPGV LIFG LPFWGT+RK+AWFKIFLQGVNSTAIGLV+AACVLLWG+A+D+YADAIVAVVAGCMQ+FLG+QAPWCI+ GGVLG+LLSD++ SL Q F+P EG
Sbjct: 291 ALPGPLFNLSAYLGAVYRGVPGAFVGWLGLFGPGVSLIFGFLPFWGTIRKVAWFKIFLQGVNSTAIGLVVAACVLLWGAAIDSYADAIVAVVAGCMQAFLGFQAPWCILAGGVLGFLLSDTLASLGQAPFFPIEG 425
BLAST of mRNA_A-nodosum_M_contig10.53.1 vs. uniprot
Match: A0A7S3UQA1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UQA1_HETAK) HSP 1 Score: 166 bits (419), Expect = 1.010e-49 Identity = 79/128 (61.72%), Postives = 93/128 (72.66%), Query Frame = 1
Query: 1 ALPGPLFNLSAYLGAVYKGVPGAFVGWVSLFGPGVMLIFGLLPFWGTVRKIAWFKIFLQGVNSTAIGLVIAACVLLWGSAVDTYADAIVAVVAGCMQSFLGYQAPWCIVGGGVLGWLLSDSVTSLAQE 384
ALPGPLFN SAYLG VYKG PGA VGW LFGPG++LIF LPFW VRK+ WFK FL GVNSTAIGLV+AACV++W A +YAD IV + G + +F AP IV GG+LGW+LS +L Q+
Sbjct: 52 ALPGPLFNFSAYLGCVYKGFPGAVVGWCGLFGPGIVLIFAFLPFWERVRKVKWFKTFLVGVNSTAIGLVVAACVVIWQKAAKSYADTIVFLFTGALVAFFKAPAPAAIVAGGLLGWVLSGQAAALGQK 179
BLAST of mRNA_A-nodosum_M_contig10.53.1 vs. uniprot
Match: A0A6T8FVL9_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A6T8FVL9_9STRA) HSP 1 Score: 163 bits (413), Expect = 1.010e-47 Identity = 79/130 (60.77%), Postives = 99/130 (76.15%), Query Frame = 1
Query: 1 ALPGPLFNLSAYLGAVYKGVPGAFVGWVSLFGPGVMLIFGLLPFWGTVRKIAWFKIFLQGVNSTAIGLVIAACVLLWGSAVDTYADAIVAVVAGCMQSFLGYQAPWCIVGGGVLGWLLSDSVTSLAQEVF 390
++PGPLFN SAYLGAVYKGVPGA V +V LFGPGV+LIFG++PFW +RK+ WF+ L+GVN+TAIGLV AACV+LW +AV T ADAIV V AG + F G QAP ++ GG+LG +L + SL Q +
Sbjct: 137 SMPGPLFNFSAYLGAVYKGVPGALVAYVGLFGPGVILIFGMVPFWARLRKVDWFRAALKGVNATAIGLVGAACVILWEAAVTTTADAIVFVFAGTLACFYGVQAPLVVISGGILGAILCEDAASLGQIAY 266
BLAST of mRNA_A-nodosum_M_contig10.53.1 vs. uniprot
Match: A0A7S1GGN7_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S1GGN7_9STRA) HSP 1 Score: 154 bits (389), Expect = 1.030e-43 Identity = 74/128 (57.81%), Postives = 92/128 (71.88%), Query Frame = 1
Query: 1 ALPGPLFNLSAYLGAVYKGVPGAFVGWVSLFGPGVMLIFGLLPFWGTVRKIAWFKIFLQGVNSTAIGLVIAACVLLWGSAVDTYADAIVAVVAGCMQSFLGYQAPWCIVGGGVLGWLLSDSVTSLAQE 384
++PGPLFN S+YLGAVYKGVPGA V ++ LFGPGVMLIFG++PFW +R + WFK L GVN+TAIGLV AACV+LW AV T+ADA+V +A C+ G APW ++ GGV G +L L Q
Sbjct: 168 SMPGPLFNFSSYLGAVYKGVPGALVAYLGLFGPGVMLIFGMVPFWARLRHVKWFKSTLNGVNATAIGLVGAACVILWEGAVTTFADAMVFTLALCLAVVYGIGAPWVVLTGGVFGAILHKDALGLGQN 295
BLAST of mRNA_A-nodosum_M_contig10.53.1 vs. uniprot
Match: A0A6T7FFJ8_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A6T7FFJ8_9STRA) HSP 1 Score: 150 bits (378), Expect = 1.590e-40 Identity = 74/131 (56.49%), Postives = 96/131 (73.28%), Query Frame = 1
Query: 1 ALPGPLFNLSAYLGAVYKGVPGAFVGWVSLFGPGVMLIFGLLPFWGTVRKIAWFKIFLQGVNSTAIGLVIAACVLLWGSAVDTYADAIVAVVAGCMQSFLGYQAPWCIVGGGVLGWLLSDSVTSLAQEVFY 393
++PGPLFN SAYLGAV++GVPGA V +V LFGPGV+LIF ++P+W +R + WF+ LQGVN+TAIGLV AAC++LW +AV T ADAIV V AG + QAP I+ GG+LG +L D SL Q ++
Sbjct: 350 SMPGPLFNFSAYLGAVHQGVPGALVAYVGLFGPGVILIFAMVPYWAWLRHVPWFRSGLQGVNATAIGLVGAACIILWEAAVLTAADAIVFVFAGTLACVFNVQAPLVILAGGILGAILCDDALSLGQVPYH 480
BLAST of mRNA_A-nodosum_M_contig10.53.1 vs. uniprot
Match: A0A6U6J7K4_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6J7K4_9STRA) HSP 1 Score: 147 bits (370), Expect = 1.870e-39 Identity = 71/135 (52.59%), Postives = 94/135 (69.63%), Query Frame = 1
Query: 1 ALPGPLFNLSAYLGAVYKGVPGAFVGWVSLFGPGVMLIFGLLPFWGTVRKIAWFKIFLQGVNSTAIGLVIAACVLLWGSAVDTYADAIVAVVAGCMQSFLGYQAPWCIVGGGVLGWLLSDSVTSLAQEVFYPSEG 405
++PGPLFN S+YLGAVY+GV GA V + LFGPGVMLIF ++PFW +R + WF+ L G+N+TAIGLV AACVLLW +AV T ADA++ VAG + ++ G AP+ + G VLG +LS L Q+ + G
Sbjct: 328 SMPGPLFNFSSYLGAVYRGVGGALVAYCGLFGPGVMLIFAVVPFWARLRHVLWFRAVLNGLNATAIGLVGAACVLLWEAAVSTAADAMIFCVAGTLAAYYGVGAPYVVASGWVLGAILSPEAADLGQQTWCDKAG 462
BLAST of mRNA_A-nodosum_M_contig10.53.1 vs. uniprot
Match: B7G7I4_PHATC (Predicted protein n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G7I4_PHATC) HSP 1 Score: 145 bits (366), Expect = 1.030e-38 Identity = 73/135 (54.07%), Postives = 94/135 (69.63%), Query Frame = 1
Query: 1 ALPGPLFNLSAYLGAVYKGVPGAFVGWVSLFGPGVMLIFGLLPFWGTVRKIAWFKIFLQGVNSTAIGLVIAACVLLWGSAVDTYADAIVAVVAGCMQSFLGYQAPWCIVGGGVLGWLLSDSVTSLAQEVFYPSEG 405
++PGPLFN SAYLGAVYKGVPGA V +V LFGPGV+LIFG++PFW +R FK L+GVN+TAIGLV AACV LW SA+ ADA+V +A M QAP+CI+ GG++G ++ L Q+ + +G
Sbjct: 352 SMPGPLFNFSAYLGAVYKGVPGALVAYVGLFGPGVILIFGMVPFWARLRHNDTFKAVLKGVNATAIGLVGAACVTLWESAISGAADAMVFSIALTMAVAFSIQAPFCILAGGIIGAIMHPDALDLGQQPYCVDQG 486
BLAST of mRNA_A-nodosum_M_contig10.53.1 vs. uniprot
Match: A0A7S0F6M4_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7S0F6M4_9STRA) HSP 1 Score: 140 bits (354), Expect = 8.880e-38 Identity = 68/130 (52.31%), Postives = 92/130 (70.77%), Query Frame = 1
Query: 1 ALPGPLFNLSAYLGAVYKGVPGAFVGWVSLFGPGVMLIFGLLPFWGTVRKIAWFKIFLQGVNSTAIGLVIAACVLLWGSAVDTYADAIVAVVAGCMQSFLGYQAPWCIVGGGVLGWLLSDSVTSLAQEVF 390
++PGPLFN S+YLGAVY+GVPGA V +V LFGPGV+LIFG++PFW +R + FK L+GVN+TAIG V AACV LW SA+ ADA++ A M G QAP+ ++ GG++G +L + L Q+ +
Sbjct: 232 SMPGPLFNFSSYLGAVYEGVPGALVAYVGLFGPGVILIFGMVPFWARLRHVKSFKAILKGVNATAIGFVGAACVTLWESAIIDAADAMIFCTALTMAVIFGVQAPYVVLTGGIMGAILHEDALDLGQQSY 361
BLAST of mRNA_A-nodosum_M_contig10.53.1 vs. uniprot
Match: A0A7S2YB08_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YB08_9STRA) HSP 1 Score: 139 bits (351), Expect = 2.090e-36 Identity = 72/135 (53.33%), Postives = 93/135 (68.89%), Query Frame = 1
Query: 1 ALPGPLFNLSAYLGAVYKGVPGAFVGWVSLFGPGVMLIFGLLPFWGTVRKIAWFKIFLQGVNSTAIGLVIAACVLLWGSAVDTYADAIVAVVAGCMQSFLGYQAPWCIVGGGVLGWLLSDSVTSLAQEVFYPSEG 405
++PGPLFN ++YLGAVY+GVPGA VG++ LFGPGV+LIF ++PFW +R A FK L+GVN+TAIGLV AACV+LW SA+ ADA+V V+ M QAP CI GGV+G +L L Q + +G
Sbjct: 363 SMPGPLFNFASYLGAVYQGVPGALVGFLGLFGPGVILIFAMVPFWARLRHNAAFKAILKGVNATAIGLVGAACVILWESAIVDAADAMVFAVSLTMAIVFSVQAPICIFVGGVIGAILHPDALDLGQVPYCEDQG 497
BLAST of mRNA_A-nodosum_M_contig10.53.1 vs. uniprot
Match: A0A1Z5K7W6_FISSO (Chromate transporter n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K7W6_FISSO) HSP 1 Score: 138 bits (348), Expect = 4.030e-36 Identity = 71/135 (52.59%), Postives = 89/135 (65.93%), Query Frame = 1
Query: 1 ALPGPLFNLSAYLGAVYKGVPGAFVGWVSLFGPGVMLIFGLLPFWGTVRKIAWFKIFLQGVNSTAIGLVIAACVLLWGSAVDTYADAIVAVVAGCMQSFLGYQAPWCIVGGGVLGWLLSDSVTSLAQEVFYPSEG 405
++PGPLFN SAYLGAVY+GVPGA V +V LFGPGV+LIF PFW +R FK L+G+NSTAIGLV AAC++LW SA+ ADAIV +A + QAP CI+ GG++G L+ L Q + G
Sbjct: 348 SMPGPLFNFSAYLGAVYQGVPGALVAFVGLFGPGVILIFAFCPFWARLRHNQDFKAILKGLNSTAIGLVGAACIILWESAISGSADAIVFSIAFTLAVVFNVQAPLCILVGGIVGALMHPDALDLGQRAYCVDSG 482 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig10.53.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig10.53.1 >prot_A-nodosum_M_contig10.53.1 ID=prot_A-nodosum_M_contig10.53.1|Name=mRNA_A-nodosum_M_contig10.53.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=136bp ALPGPLFNLSAYLGAVYKGVPGAFVGWVSLFGPGVMLIFGLLPFWGTVRKback to top mRNA from alignment at A-nodosum_M_contig10:523871..525399+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig10.53.1 ID=mRNA_A-nodosum_M_contig10.53.1|Name=mRNA_A-nodosum_M_contig10.53.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=1529bp|location=Sequence derived from alignment at A-nodosum_M_contig10:523871..525399+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig10:523871..525399+ >mRNA_A-nodosum_M_contig10.53.1 ID=mRNA_A-nodosum_M_contig10.53.1|Name=mRNA_A-nodosum_M_contig10.53.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=408bp|location=Sequence derived from alignment at A-nodosum_M_contig10:523871..525399+ (Ascophyllum nodosum dioecious)back to top |