mRNA_A-nodosum_M_contig10.52.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig10.52.1
Unique NamemRNA_A-nodosum_M_contig10.52.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
BLAST of mRNA_A-nodosum_M_contig10.52.1 vs. uniprot
Match: D7FM24_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM24_ECTSI)

HSP 1 Score: 479 bits (1233), Expect = 3.960e-167
Identity = 236/293 (80.55%), Postives = 261/293 (89.08%), Query Frame = 1
Query:    1 PAEENAGEDLPFSTRLKQVFWQFLPLGVIAYGGPNAHIALLYERFVDKSKWLTEEQFVELMAVGQGLPGPTSTQASVSMGTFRAGIPGGLLSFALWNIPSFIVLVLAGVGVRDLLGDHDLDWLSGVGPAAVSLVFVAAYKLGKKVNNSKLKFTLSLVSACVTLLINGDENISSNVSAWVFPLMLICGGMVTLVDWKYRPNIYETALEGRTYSRINIPMWMGCAIIVGWLVILMVSLTLFPDSGLGGLFKSFFRIGSIIYGGGQVVLPMLVDEVVDPGWVTEKQFFQGFALTQA 879
            P E+ +  DLPFS R+KQVFWQFLPLGV+AYGGP AHIALL+ERFVDKSKWL+EEQFVELMAVGQGLPGPTSTQ  VSMG +RAGIPGGLLSFALWNIPSFIVL LAG+GV++LLGD D DWLSG+GPAA+SLVFVAAYKLGKKVN S LKF+LSLVSACVTLLINGDE+I+ NVSAWVFPLML+CGG+V L D K      E ALEG+TYSRINIPMW+G AI VGW  IL+VS++ FP SGLGGLFK+FFRIGSIIYGGGQVVLPMLVDEVVDPGW+TEKQF+QGFAL QA
Sbjct:    4 PVEDPSEADLPFSERIKQVFWQFLPLGVVAYGGPTAHIALLHERFVDKSKWLSEEQFVELMAVGQGLPGPTSTQMVVSMGAYRAGIPGGLLSFALWNIPSFIVLTLAGLGVKELLGDDDPDWLSGLGPAAISLVFVAAYKLGKKVNKSPLKFSLSLVSACVTLLINGDEDINPNVSAWVFPLMLVCGGLVMLADSKA-----ELALEGKTYSRINIPMWLGGAIAVGWATILVVSISAFPGSGLGGLFKAFFRIGSIIYGGGQVVLPMLVDEVVDPGWLTEKQFYQGFALVQA 291          
BLAST of mRNA_A-nodosum_M_contig10.52.1 vs. uniprot
Match: A0A2R5G6L9_9STRA (Uncharacterized protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G6L9_9STRA)

HSP 1 Score: 262 bits (670), Expect = 2.220e-81
Identity = 149/307 (48.53%), Postives = 193/307 (62.87%), Query Frame = 1
Query:   22 EDLPFSTRLKQVFWQFLPLGVIAYGGPNAHIALLYERFVDKSKWLTEEQFVELMAVGQGLPGPTSTQASVSMGTFRAGIPGGLLSFALWNIPSFIVLVLAGVGVRDLLGDHDLDWLSGVGPAAVSLVFVAAYKLGKKVNN------SKLKFTLSLVSACVTLLINGDENISSNVSAWVFPLMLICGGMVTLVDWKYRPNIYETALEGRT----------YSRINIPMWMGCAIIVGWLVILMVSLTL-----FPDSGLGGLFKSFFRIGSIIYGGGQVVLPMLVDEVVDPGWVTEKQFFQGFALTQA 879
            E + F  RL +VF  FLPLG+IA+GGP AHI +L ++FV+K KWL  E+FVELM+VGQGLPGPTSTQ  V++G  RAGIPGGL++F LWN+PSFIV V   +     L +   D+L G+  AA SLVF+AAY LG KV +       KLK  L+  S   TLLI GD+ I++  ++  FP+MLI GG++T+VD + RP   E      T             INI   +G  + + W+V L+  + L         G G LF++FFR GSIIYGGGQVVLPML+ EVV+ GW+ E  FF GF L Q+
Sbjct:   34 EGMSFIERLAEVFVGFLPLGLIAFGGPAAHIGILQQQFVEKRKWLDTERFVELMSVGQGLPGPTSTQMVVAIGATRAGIPGGLVAFVLWNLPSFIVCVTVALLAVSTLDETLPDYLIGLPAAATSLVFLAAYSLGVKVLSHEESYVQKLKIALATASTVGTLLITGDDRINNRWASLAFPVMLIIGGVITVVDSR-RPGKLENYFTPPTEIDEADNRSILKNINISPRLGLLLFITWIVTLVSFIALRSAGVLAPGGYGELFEAFFRTGSIIYGGGQVVLPMLLVEVVETGWLAESDFFIGFGLVQS 339          
BLAST of mRNA_A-nodosum_M_contig10.52.1 vs. uniprot
Match: A0A7S2YB08_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YB08_9STRA)

HSP 1 Score: 249 bits (637), Expect = 7.310e-76
Identity = 138/301 (45.85%), Postives = 189/301 (62.79%), Query Frame = 1
Query:   25 DLPFSTRLKQVFWQFLPLGVIAYGGPNAHIALLYERFVDKSKWLTEEQFVELMAVGQGLPGPTSTQASVSMGTFRAGIPGGLLSFALWNIPSFIVLVLAGVGVRDLLGDHDLDW-LSGVGPAAVSLVFVAAYKLGKKVNNSKLKFTLSLVSACVTLLINGDENISSNVSAWVFPLMLICGGMVTLVDWKYRPNIYETALEG----------RTYSRINIPMWMGCAIIVGW-----LVILMVSLTLFPDSGLGGLFKSFFRIGSIIYGGGQVVLPMLVDEVVDPGWVTEKQFFQGFALTQA 879
            D P+S R+ +VF  F PLG +A+GGP AH+A+L +  V++  WL EEQF EL A+GQGLPGPTSTQ  +S  T RAG  GGL++F LWN+P  IVL   GV + + +   +  W L+G+ PAA+SLVF A Y    K+++  L+  ++L S+ V +LIN D NI  + S WVFP  L  GG+ T +D K R N + T  +            T+ RI IP+W+G  I + W     LVI++V +    +  L  +F++ +RIGSII+GGGQVVLPML DEVV P W+T+ QF QG  L Q+
Sbjct:   68 DAPWSERMWEVFTTFWPLGFVAFGGPQAHVAILRDHLVEQRDWLDEEQFTELFAIGQGLPGPTSTQLVISTATSRAGPLGGLMAFFLWNLPGLIVLTCCGVLIDEFVNPDEAPWYLAGLPPAAISLVFKAFYGFASKLDS--LQIWMALCSSLVAILINNDANIKPSSSQWVFPCCLALGGLTTYIDSK-RANPFSTYTKSPSKGWDRDDDTTFKRIGIPLWVGALIFLVWGGVLALVIILVDVAEVTNVYLE-IFETMYRIGSIIFGGGQVVLPMLQDEVV-PDWMTKDQFLQGLGLAQS 363          
BLAST of mRNA_A-nodosum_M_contig10.52.1 vs. uniprot
Match: A0A7S2KXW7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KXW7_9STRA)

HSP 1 Score: 242 bits (617), Expect = 3.620e-74
Identity = 137/299 (45.82%), Postives = 188/299 (62.88%), Query Frame = 1
Query:   22 EDLPFSTRLKQVFWQFLPLGVIAYGGPNAHIALLYERFVDKSKWLTEEQFVELMAVGQGLPGPTSTQASVSMGTFRAGIPGGLLSFALWNIPSFIVLVLAGVGVRDLLGDHDLD-WLSGVGPAAVSLVFVAAYKLGKKVNNSKLKFTLSLVSACVTLLINGDENISSNVSAWVFPLMLICGGMVTLVDWKYRPN---IYETAL-----EGRTYSRINIPMWMGCAIIVGWLVILMVSLTLFP----DSGLGGLFKSFFRIGSIIYGGGQVVLPMLVDEVVDPGWVTEKQFFQGFALTQA 879
            ED P+ TRL +V   F PLG +A+GGP AH+A+L +  V +  W+ EE F EL A+GQGLPGPTSTQ  VS    RAG  GGLL+F LWN+P  IVL   GV +++ +   D   +L G+ PAA+SLVF A Y  G K++  +L   L+  S  + +L+NGD+NI    + +VFP+ML+CGG+VT  D K R N    Y+T       + +T+ RI I + +G  I + W V+L+ S+ L      D+    LF+  +RIGSII+GGGQVVLP+L  EVV P W++E QF+QG  L Q+
Sbjct:   42 EDTPWLTRLHEVLVTFWPLGFVAFGGPQAHVAILRDHLVVQRDWMDEEAFTELFAIGQGLPGPTSTQLVVSTALARAGPVGGLLAFFLWNLPGLIVLTTCGVLIKEFINPDDPPFYLIGLPPAAISLVFKAFYGFGLKLD--QLGIALATFSCIIAILLNGDDNIEPTATQYVFPIMLLCGGLVTYFDSK-RENPWGTYKTPKGWDKEDDKTFKRIGISVPVGIFIWIVWAVVLVASIVLVDVGDVDNEYLQLFEKMYRIGSIIFGGGQVVLPLLEAEVV-PHWLSEDQFYQGLGLAQS 336          
BLAST of mRNA_A-nodosum_M_contig10.52.1 vs. uniprot
Match: A0A1V9ZB66_9STRA (Chromate Ion Transporter (CHR) Family n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZB66_9STRA)

HSP 1 Score: 242 bits (618), Expect = 5.540e-74
Identity = 130/293 (44.37%), Postives = 186/293 (63.48%), Query Frame = 1
Query:   34 FSTRLKQVFWQFLPLGVIAYGGPNAHIALLYERFVDKSKWLTEEQFVELMAVGQGLPGPTSTQASVSMGTFRAGIPGGLLSFALWNIPSFIVLVLAGVGVRDLLGDHDLDWLSGVGPAAVSLVFVAAYKLGKKV-NNSKLKFTLSLVSACVTLLINGDENISSNVSAWVFPLMLICGGMVTLVDWKY---RPNIYETALEGRT--YSR-INIPMWMGCAIIVGWLVILMVSLTLFPDSGLG----GLFKSFFRIGSIIYGGGQVVLPMLVDEVVDPGWVTEKQFFQGFALTQA 879
            F  RL  V  Q LP+ + ++GGP AH  L +ERFV+K +WL +E+F+E++A+G  LPGPTSTQ   SMG FRAG  GG+L+F  W +P F+V++ AG+G ++ LG     W++G+ PAAVSLV +AA KL +K   +  LK  ++ VS+CV L   G       +  W+FPL+++ GG+ T+        +P I      G +  + R + IP+W+G A+I GW+    +   L     LG    GLF +FFR+GSII+GGGQV+LPML++++V  GWVT+ QFF GFAL QA
Sbjct:   18 FIARLLSVPIQMLPVALFSFGGPQAHYGLAHERFVEKLQWLDDERFLEVIALGSALPGPTSTQVLTSMGIFRAGPLGGILAFVTWMLPGFLVMLFAGLGAQEYLGGGVPVWMAGLAPAAVSLVIIAAVKLWQKACGDDSLKMAIAGVSSCVVLATQG-------LGTWIFPLLMLLGGLTTVAASAAGYAKPLIAPKRGHGGSPHFERELGIPLWVGAALIAGWIAAFGLLAYLDTTHALGHHYLGLFYAFFRMGSIIFGGGQVMLPMLLNDIVSAGWVTKDQFFVGFALIQA 303          
BLAST of mRNA_A-nodosum_M_contig10.52.1 vs. uniprot
Match: A0A067CUR6_SAPPC (Uncharacterized protein (Fragment) n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CUR6_SAPPC)

HSP 1 Score: 243 bits (619), Expect = 5.570e-74
Identity = 131/295 (44.41%), Postives = 186/295 (63.05%), Query Frame = 1
Query:   43 RLKQVFWQFLPLGVIAYGGPNAHIALLYERFVDKSKWLTEEQFVELMAVGQGLPGPTSTQASVSMGTFRAGIPGGLLSFALWNIPSFIVLVLAGVGVRDLLGDHDLDWLSGVGPAAVSLVFVAAYKLGKKV-NNSKLKFTLSLVSACVTLLINGDENISSNVSAWVFPLMLICGGMVTL-----------VDWKYRPNIYETALEGRTYSRINIPMWMGCAIIVGWLVILMVSLTLFPDSGLG----GLFKSFFRIGSIIYGGGQVVLPMLVDEVVDPGWVTEKQFFQGFALTQA 879
            RL  V  Q LP+ + ++GGP AH+ L +ERFVDK +WL +E+F+E++A+G  LPGPTSTQ   SMG FRAG  GG+L+F +W  P F+V++LAG+G ++ LG     W+ G+ PAAVSLV +AA KL +K   + +LK +++ +S+CV L   G       +  W+FPL++I GG  TL           V  K + N +    E      + IP W G  +I+GWL    +   L     LG    GLF +FFR+GSII+GGGQV+LPML++++V+ GWV+++QFF GFAL QA
Sbjct:   24 RLLSVPVQMLPVALFSFGGPQAHLGLAHERFVDKLQWLDDERFLEVIALGSALPGPTSTQVLTSMGIFRAGPLGGILAFLVWTAPGFLVMLLAGLGAQEYLGAGVPLWMVGLAPAAVSLVIIAATKLWQKACGDDQLKMSIAAISSCVVLATQG-------LGTWIFPLLMIAGGFTTLSAMALGYPNPLVAAKRQDNGHSPHFE----RELGIPAWAGVLLILGWLAAFGLLAYLDSTGTLGRSYLGLFYAFFRMGSIIFGGGQVMLPMLLNDIVNAGWVSKEQFFIGFALIQA 307          
BLAST of mRNA_A-nodosum_M_contig10.52.1 vs. uniprot
Match: W4FW75_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FW75_9STRA)

HSP 1 Score: 241 bits (614), Expect = 2.730e-73
Identity = 125/294 (42.52%), Postives = 184/294 (62.59%), Query Frame = 1
Query:   31 PFSTRLKQVFWQFLPLGVIAYGGPNAHIALLYERFVDKSKWLTEEQFVELMAVGQGLPGPTSTQASVSMGTFRAGIPGGLLSFALWNIPSFIVLVLAGVGVRDLLGDHDLDWLSGVGPAAVSLVFVAAYKLGKKV-NNSKLKFTLSLVSACVTLLINGDENISSNVSAWVFPLMLICGGMVTLVD--WKYRPNIYETALEG----RTYSRINIPMWMGCAIIVGWLVILMVSLTLFPDSGLG----GLFKSFFRIGSIIYGGGQVVLPMLVDEVVDPGWVTEKQFFQGFALTQA 879
            P+ TRL  V  + LP+ ++++GGP AH+ L +ERFV++  WL +++++E++A+G  LPGPTSTQ   S+G FRAG+ GG+L+F +W +P+F V+ +AG+G +  LG     W++G+ PAA SLV +AA KL  K   N ++K  ++ VSACV L        + NV  W+FP +++ GG+ TL+   + Y  +  +   +G           IP W G  II  W V   V       + LG    GLF +FFRIGSII+GGGQV+LPML++++V  GWVT+ QFF GFAL Q+
Sbjct:   25 PYLTRLLSVGVELLPVALVSFGGPQAHLGLAHERFVERLHWLDDDRYLEVLALGSALPGPTSTQVISSIGLFRAGLLGGVLAFVVWALPAFTVMTVAGLGAQHYLGAGLPAWMTGLAPAATSLVIIAAVKLWNKACGNDQVKMAIAAVSACVVLA-------TQNVGTWIFPALMVAGGVTTLLAPAFGYTKSFIKATRDGIVNPLAQREFGIPAWAGVGIIFVWAVAFAVLSYFASINELGRGYVGLFYAFFRIGSIIFGGGQVMLPMLLNDIVQAGWVTKDQFFIGFALIQS 311          
BLAST of mRNA_A-nodosum_M_contig10.52.1 vs. uniprot
Match: B7G7I4_PHATC (Predicted protein n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G7I4_PHATC)

HSP 1 Score: 241 bits (615), Expect = 7.050e-73
Identity = 135/298 (45.30%), Postives = 182/298 (61.07%), Query Frame = 1
Query:   25 DLPFSTRLKQVFWQFLPLGVIAYGGPNAHIALLYERFVDKSKWLTEEQFVELMAVGQGLPGPTSTQASVSMGTFRAGIPGGLLSFALWNIPSFIVLVLAGVGVRDLLGDHDLDW-LSGVGPAAVSLVFVAAYKLGKKVNNSKLKFTLSLVSACVTLLINGDENISSNVSAWVFPLMLICGGMVTLVDWKYRPNIYETALEGR--------TYSRINIPMWMGCAIIVGWLVILMVSLTLFP----DSGLGGLFKSFFRIGSIIYGGGQVVLPMLVDEVVDPGWVTEKQFFQGFALTQA 879
            D P+  R+ +VF  F PLG+IA+GGP AH+A+L +  V++  WL EE F EL A+GQGLPGPTSTQ  +S    RAG  GGLL+F LWN+P  I+L L G  +   +  +   W L G+ PAA+SLVF A Y    K+++  L   L+L S  V +++N D++I    S WVFP  L  GG+VT +D K        A  G+        T  RI IP+W+G  I + WL IL++ + L      D+    +F++ +RIGSII+GGGQVVLPML DEVV PGW+T+ QF QG  L Q+
Sbjct:   58 DAPWKERMWEVFTTFWPLGLIAFGGPQAHVAILRDHLVEQRDWLDEEAFTELFAIGQGLPGPTSTQLVISTALSRAGPLGGLLAFFLWNLPGLIILTLCGALIDAFVDPNSPPWYLIGLPPAAISLVFKAFYGFAIKLDS--LGIILALCSCLVAIVLNNDDDIDPASSQWVFPTTLALGGLVTYLDSKREKPFATYASPGKGWDKDSDETMKRIGIPLWVGALIFLLWLGILILVIILVDVAEVDNVYLKIFETMYRIGSIIFGGGQVVLPMLQDEVV-PGWMTKDQFLQGLGLAQS 352          
BLAST of mRNA_A-nodosum_M_contig10.52.1 vs. uniprot
Match: A0A485L153_9STRA (Aste57867_14606 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L153_9STRA)

HSP 1 Score: 238 bits (608), Expect = 1.880e-72
Identity = 125/297 (42.09%), Postives = 188/297 (63.30%), Query Frame = 1
Query:   31 PFSTRLKQVFWQFLPLGVIAYGGPNAHIALLYERFVDKSKWLTEEQFVELMAVGQGLPGPTSTQASVSMGTFRAGIPGGLLSFALWNIPSFIVLVLAGVGVRDLLGDHDLDWLSGVGPAAVSLVFVAAYKLGKKV-NNSKLKFTLSLVSACVTLLINGDENISSNVSAWVFPLMLICGGMVTLVD--WKYRPNIYETALEG----RTYSRINIPMWMGCAIIVGWLVILMVSLTLFPD---SGLG----GLFKSFFRIGSIIYGGGQVVLPMLVDEVVDPGWVTEKQFFQGFALTQA 879
            P+ TRL  V  +  P+ ++++GGP AH+ L +ERFV++  WL +++++E++A+G  LPGPTSTQ   SMG FRAG  GGLL+F +W +P F+++ LAG+G +  LG+    W+ G+ PAAVSLV +AA KL  K   + ++K  ++ VSACV L        +  +  W+FP ++I GG+ TL    + Y  +  + +  G         + IP W+G  II+ W V    +L+ F       LG    GLF +FFR+GSII+GGGQV+LPML++++VD GWV+++QFF GFAL Q+
Sbjct:   20 PYLTRLLSVVVEMFPVSLLSFGGPQAHLGLAHERFVERLHWLDDDRYLEVIALGSALPGPTSTQVVSSMGLFRAGPLGGLLAFVIWCLPGFVIMTLAGLGAQHYLGNGLPSWMIGLAPAAVSLVIIAATKLWTKACGDDQVKMAIATVSACVVLS-------TQKLGTWIFPALMIAGGLTTLAAPLFGYTKSFVKASRGGVINPLVQRELGIPAWVGVVIILAWAVA-FATLSYFDSVVRHALGRSFLGLFYAFFRMGSIIFGGGQVMLPMLLNDIVDAGWVSKEQFFIGFALIQS 308          
BLAST of mRNA_A-nodosum_M_contig10.52.1 vs. uniprot
Match: A0A6T7FFJ8_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A6T7FFJ8_9STRA)

HSP 1 Score: 239 bits (611), Expect = 2.110e-72
Identity = 136/304 (44.74%), Postives = 185/304 (60.86%), Query Frame = 1
Query:    7 EENAGEDLPFSTRLKQVFWQFLPLGVIAYGGPNAHIALLYERFVDKSKWLTEEQFVELMAVGQGLPGPTSTQASVSMGTFRAGIPGGLLSFALWNIPSFIVLVLAGVGVRDLLG-DHDLDWLSGVGPAAVSLVFVAAYKLGKKVNNSKLKFTLSLVSACVTLLINGDENISSNVSAWVFPLMLICGGMVTLVDWKYRPNI--YETALEG------RTYSRINIPMWMGCAIIVGWLVILMVSLTLFP----DSGLGGLFKSFFRIGSIIYGGGQVVLPMLVDEVVDPGWVTEKQFFQGFALTQA 879
            EE   ++ P++ R  +V   F PLG +A+GGP AH+A+L +  V +  W+ EEQF EL A+GQG+PGPTSTQ  VS  T RAG  GGL++F LW +P  ++L + GV +   +  D+   +L G+ PAA SLVF A Y    K++  KL   LS+ S  V +LINGD NI   VS WV+P ML  GG+VT  D +       Y  + +G      R   RI IP+W+G AI   WL +L+  + L      ++   G+F+  +RIGSII+GGGQVVLPML  EVV P W+T+ QFFQG  L+Q+
Sbjct:   50 EEELEDEAPWNERFWEVVTTFWPLGFVAFGGPQAHVAILRDHLVVQRNWMDEEQFTELFAIGQGIPGPTSTQLVVSTATSRAGPLGGLVAFFLWTLPGLVILTVCGVLIETFVDQDNAPFYLIGLPPAATSLVFKAFYGFSTKLD--KLGIFLSMCSGMVAILINGDYNIDVKVSQWVYPTMLAVGGLVTYTDSRREKPFSEYTKSKKGWDVQSDRLMKRIGIPLWVGAAIAGVWLFLLVSCILLVDVFKVENTYLGIFEVMYRIGSIIFGGGQVVLPMLQGEVV-PQWMTKDQFFQGLGLSQS 350          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig10.52.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FM24_ECTSI3.960e-16780.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A2R5G6L9_9STRA2.220e-8148.53Uncharacterized protein n=1 Tax=Hondaea fermentalg... [more]
A0A7S2YB08_9STRA7.310e-7645.85Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A7S2KXW7_9STRA3.620e-7445.82Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
A0A1V9ZB66_9STRA5.540e-7444.37Chromate Ion Transporter (CHR) Family n=1 Tax=Achl... [more]
A0A067CUR6_SAPPC5.570e-7444.41Uncharacterized protein (Fragment) n=2 Tax=Saprole... [more]
W4FW75_9STRA2.730e-7342.52Uncharacterized protein n=4 Tax=Aphanomyces astaci... [more]
B7G7I4_PHATC7.050e-7345.30Predicted protein n=3 Tax=Phaeodactylum tricornutu... [more]
A0A485L153_9STRA1.880e-7242.09Aste57867_14606 protein n=1 Tax=Aphanomyces stella... [more]
A0A6T7FFJ8_9STRA2.110e-7244.74Hypothetical protein n=1 Tax=Attheya septentrional... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig10contigA-nodosum_M_contig10:518824..523190 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D7FM24
PFAMsChromate_transp
Model size894
Max annot lvl2759|Eukaryota
KEGG koko:K07240
KEGG TC2.A.51.1
Hectar predicted targeting categoryother localisation
Exons6
Evalue6.49e-168
EggNOG OGsCOG2059@1|root,2QRJG@2759|Eukaryota
DescriptionChromate transporter
Cds size894
COG categoryP
BRITEko00000,ko02000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig10.52.1prot_A-nodosum_M_contig10.52.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig10 518824..523190 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866349.672703-CDS-A-nodosum_M_contig10:518823..5188771680866349.672703-CDS-A-nodosum_M_contig10:518823..518877Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig10 518824..518877 +
1680866349.6838732-CDS-A-nodosum_M_contig10:519589..5197641680866349.6838732-CDS-A-nodosum_M_contig10:519589..519764Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig10 519590..519764 +
1680866349.6928253-CDS-A-nodosum_M_contig10:520544..5207351680866349.6928253-CDS-A-nodosum_M_contig10:520544..520735Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig10 520545..520735 +
1680866349.7134075-CDS-A-nodosum_M_contig10:521404..5215991680866349.7134075-CDS-A-nodosum_M_contig10:521404..521599Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig10 521405..521599 +
1680866349.7245407-CDS-A-nodosum_M_contig10:522392..5225661680866349.7245407-CDS-A-nodosum_M_contig10:522392..522566Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig10 522393..522566 +
1680866349.7324758-CDS-A-nodosum_M_contig10:523085..5231901680866349.7324758-CDS-A-nodosum_M_contig10:523085..523190Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig10 523086..523190 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig10.52.1

>prot_A-nodosum_M_contig10.52.1 ID=prot_A-nodosum_M_contig10.52.1|Name=mRNA_A-nodosum_M_contig10.52.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=298bp
PAEENAGEDLPFSTRLKQVFWQFLPLGVIAYGGPNAHIALLYERFVDKSK
WLTEEQFVELMAVGQGLPGPTSTQASVSMGTFRAGIPGGLLSFALWNIPS
FIVLVLAGVGVRDLLGDHDLDWLSGVGPAAVSLVFVAAYKLGKKVNNSKL
KFTLSLVSACVTLLINGDENISSNVSAWVFPLMLICGGMVTLVDWKYRPN
IYETALEGRTYSRINIPMWMGCAIIVGWLVILMVSLTLFPDSGLGGLFKS
FFRIGSIIYGGGQVVLPMLVDEVVDPGWVTEKQFFQGFALTQARSLL*
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mRNA from alignment at A-nodosum_M_contig10:518824..523190+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig10.52.1 ID=mRNA_A-nodosum_M_contig10.52.1|Name=mRNA_A-nodosum_M_contig10.52.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=4367bp|location=Sequence derived from alignment at A-nodosum_M_contig10:518824..523190+ (Ascophyllum nodosum dioecious)
CCCGCTGAGGAAAATGCAGGAGAGGACCTTCCCTTCTCGACTAGATTGAA GCAGGTCAGGTCAAAATGACGTGACGTGACGTTCGCCGCCACTTTTTCCG TGTTGGCTCTACTCACATGCCTGCGAAATGCTCTAGAAACTCCGACAACT ATTATAACTTACTGTACTTTTGATGTTGAAAATGTTGAAAATGATTAAGG CAAGCTTACCTGATACAGTCCAGTACCATGGTACACTTTGTGTTTGTTGT TTTGTATCAGAAAAAAAAGGCAATGCACAATGTACTAGTATACAAGAGAA CGGGGGAATTCGGAATTGGTTCTACCATAATATGTCAATACTGTGCAGCT CGGCATTCCGGGGAAAAGATATAAAGAGAGGGACTGGTATGCTTCAACGA CCCAAGAAATTACTGTTTCTAGACAAAATACTTTCGTTTTGTTCAGATTG TCAGTAGGCGCGGAATAATGTTTCGGCCGGCGGAAGGGGCATGCACTCGA TGGCATACGGCATGCAATCGATGGCATGCGGCTTTCGGGATTTATGACTC ATTCAAGCTCGGTGCAAATCTTACTGCGTCATTCCACTGCGACCCCGCTA CAGCTATCTTACAGCGTATCAATACTCTCTAGTACCTCTAGTACCTGTAC CCTTGTTTGCTTGCTCCTCTCTCGTCGACCTGCTATTTTTTACCGCTTTT TCTTTCTTTCTTTCTTTTTTCTTCATCACCTTCTCCGCCCGCGCGCCACG TTTTGGCGACGGACAGGTGTTCTGGCAGTTCCTCCCTCTGGGCGTGATCG CTTACGGGGGGCCCAACGCACACATCGCCCTGCTGTACGAGCGCTTCGTG GACAAGTCCAAGTGGTTGACGGAGGAGCAGTTCGTTGAGCTCATGGCCGT CGGGCAGGGGCTGCCCGGTCCGACCTCGACACAGGCAAGCGGTTCATCGA GGCGAGGTCTGTGGCCGTTCTTGCGTTCAACAACCACTCGGTCGTTCCTC TGTGTACGTGCGCAGGCCTGGCAGGGTAGATTGGCGCGGAGTATAGAAAA CTTCGTAGGGAGAATGAAGAGAGTATTCACTTGTTGAACGTCGCGGATGG AGGCATCGGGGGGGTGTGAAGTTTTGATGGTTGCGTTGGCAAATGCGGAA GAACTCAACCCATAGCGGTGCCTCGTACACTCACCCTGAGAGGACGTTGT ATCGTGTGTCGTCGTATACCGCTACCGTGCCACCAGCGCTTGAGGGCCAC TTACTACGGTACCCATGCCACGGCGCGTGGCTTCTGGGGTACAGTACGTC AAGAGTGGCTCATGATTGATTCTCATCTCTTTTAAGGGTTTTGAGATTGG AATAGAAGACGTGGGATACTCTCCGTCGCGCGGAACTCCTCAAGCGGTCG CCGGTTCTTGCCTATAATATACGGTATCAATATTTATACATGAAAAGTAC AAGTGTACACCTCCAGGCAACACACACAAGGTGCCCAGGGCTTGAGTAAA AAAATGTACACGTAGAGAGAGTGTGTCCCCTTTGTCTCGTCTGATCAGAG GTTTTCGTAATAAGTATCATTGATCCCCCCTGGGAGGATCAATGCGACTG GTATATAATGACTATTAATAGTATGACAAGGCCGGGTTGCGCGGTTATGT GCAATTTAAATACACATACACATACACATACAAAAAACATACATATACCC CCCCCCCCATGCAGATGGTAGTATCGATGGGGACGTTTCGAGCGGGCATC CCGGGGGGGCTCCTCTCCTTCGCGCTGTGGAACATCCCGAGCTTCATCGT CCTCGTCCTGGCAGGCGTCGGCGTAAGAGACCTCCTCGGCGACCACGACC TCGACTGGCTGTCCGGCGTCGGACCCGCGGCGGTCTCGCTTGTCTTCGTG GCTGCCTACAAGGTAGGTCTTGTCTTGCAACTACGAGTAGGGGGTTTGTT TCGACGCGGCTTTTATCTGTTGGGTGGGGGGGGCGATTTTCTCTTCCTGT CAGAGGCTGCTTCAAAGATAGGCCGCTGTGTTGCTTGGAAACCCCGCAAA CGTGGGGTTTTGGGACGGACGCTATTGGCGACGTTTCTAGTTTTCGCTTT TTTTGTGGGGAGGAGGGAGAAGGAGGGTTGGGGTGAGAGGGGTAGTTAGA TTCTCGACATGGGTCGCTTTATGTCCTCTCGCAACGCCGGTGCCGTACAC GCCATGGGCGTGTTCCCTCGACATCCCCTCTCCTAACCGCGATATCGACC CCAAGGCAGAGAAGCGAAGAAAGTCCGTACGGATATAGATGCCGAGTACG GTATGGACCACCTTTTGCTGGAGCCTTCTCCTCTTTTGACTTTTGCCTCA TTTTCCCTATGCAGCAGTGTATGGCACTGCCTCGTCCGCCCGTCCCCCCT TTCCCCCCATTTGCTCTTCCTCCTCCCTCGACAAACTCCCACCCTTCCTG CCTCCGCCGTGGTACCAATCCGCCCTACGCCATTCAAAACCTGTCACTCC CTATTTTTCGTCAGGACTCTGTTTCGCCCCCCCCCCCCTCTCCAAACTTG ACCCTTTCACTCAAACACTTGAACAACGCAGCTGGGAAAGAAGGTCAACA ACAGCAAGCTGAAGTTCACCCTGTCCCTGGTCTCGGCGTGCGTAACGCTC CTCATCAACGGCGACGAGAACATCTCCTCCAACGTGTCCGCGTGGGTTTT CCCTTTGATGCTGATCTGCGGTGGTATGGTGACCCTCGTGGACTGGAAGT ATCGCCCCAACATCTACGAGACTGCCGTCGCAACAAAGAGTGAGTCCGGC TAAAGCCCGACCGCGCGCGCGGGAGGCTAGGGGGCGGAGAAAATCAGGCC CAATCGGAATCTTCGATCGGATTTCTGTTTGTTTTTGGAGGCTAGATTCG TCCCATCTCCCCTCATATGTGTGCGTAGAGCGAGAGAAAGAGGGAGAGTG GTGTATTCTTCCGAGGGGTTTATAGAGAACTTGAGGCGTAGGGAAATGGG AGAGTACAGTAGTTTCGTTTGAGCAGCGCGGGGCAGGTGAGGTCGTGAGC CGGCGTAGACGATCGGTACTGGCCTTCAGCGCGCAGAGCTTGTTAACATT TGAGTTACCAGAGATGTGCCGTGCCGGTGTCGCCCCGATCGAGACAGGCG TTTCCCCCTTTGACTGCCTACCCTTTAATGTTATCTAACAGAGTATTCTT CATGATGTTTCTCAAGATAAAGCAATCACTTTTTGAATAGATATGGTTTT AAAGTATAGTTATTTTTTTGAGCGCTGAGTCCCGTCTCAACCCTAAACCT TGCGTATTCTCCCTCCTTATGACTACTCGATTGCAATCCGCCCTTAAACA TCGGACCATCGACTCCAGAGCTGAACTCGCGTGGTCGACGCCGTGACTTT AGCAACTGCTGCTGCCACCGGCCAAGTCGTGGCGGTACCCCCCGACCCCG CTCGTTATTTCTAACATTTATCCCGCCGCCCCTTTTTACCACGATAAAAA ATAATGCCGTCGATGTCACCAAAAAACAAAATAAAACGACAAACAACGAC AGCCAAAGCGGAGCTCGAGCTCGAGGGCAGGACGTATTCGAGAATCAACA TCCCCATGTGGATGGGCTGTGCGATCATCGTCGGATGGCTCGTGATACTG ATGGTTTCTCTGACGCTTTTCCCCGACTCGGGGCTGGGGGGACTCTTCAA GTCGTTCTTCCGCATCGGCTCCATCATCTACGGGGGAGGGCAGGTTAGCG ACACACGAGATGGGGGTCTTAAAAACTTAGCTTTCACACAAGAGGGATTA GGGGGGCGGGGAGGGGGTCGTTTGCAGGGGGCTTGTTTGTCAGGTATTCC CTGTTTCCCCGCTCACGAACTCACTCACTTACTCACTCAATGTACTATTA ATAGTAAGGTTTTGGTGCGGTTTTCACGTTTTCACATTTTCGCCTTTTAC TCAACGAGAGAGAAAGAGAGAAAGAGAGATCATTGCAGAACCTCCTCCCC TCGCTTTATGCCAATTGCAGGGCCCAGCGTCGCCATCACGACTCCTCTTT TAATAACGATGACAATAAATGTAATACTAACTTTTTTTTATAACGATAGA TAGTTACAGCAGTTCTTGTAGCGCATTACAGTTACAGCCTCGCCTCACCT ACGTTAATAACTAATAACTTCGCGCGTGCAGCCTTCGTCGCCCATCCCGC TGCCGCCGCTTCTCTGGTCGATGGCTAATAATAAATAGTTAATGATTAAT AACTAATGACAGGTGGTGTTACCGATGCTCGTCGATGAGGTGGTCGATCC CGGATGGGTTACCGAGAAGCAGTTCTTCCAGGGATTCGCTCTAACGCAGG CACGGTCTCTCTTATAG
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Coding sequence (CDS) from alignment at A-nodosum_M_contig10:518824..523190+

>mRNA_A-nodosum_M_contig10.52.1 ID=mRNA_A-nodosum_M_contig10.52.1|Name=mRNA_A-nodosum_M_contig10.52.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=894bp|location=Sequence derived from alignment at A-nodosum_M_contig10:518824..523190+ (Ascophyllum nodosum dioecious)
CCCGCTGAGGAAAATGCAGGAGAGGACCTTCCCTTCTCGACTAGATTGAA
GCAGGTGTTCTGGCAGTTCCTCCCTCTGGGCGTGATCGCTTACGGGGGGC
CCAACGCACACATCGCCCTGCTGTACGAGCGCTTCGTGGACAAGTCCAAG
TGGTTGACGGAGGAGCAGTTCGTTGAGCTCATGGCCGTCGGGCAGGGGCT
GCCCGGTCCGACCTCGACACAGGCAAGCGTATCGATGGGGACGTTTCGAG
CGGGCATCCCGGGGGGGCTCCTCTCCTTCGCGCTGTGGAACATCCCGAGC
TTCATCGTCCTCGTCCTGGCAGGCGTCGGCGTAAGAGACCTCCTCGGCGA
CCACGACCTCGACTGGCTGTCCGGCGTCGGACCCGCGGCGGTCTCGCTTG
TCTTCGTGGCTGCCTACAAGCTGGGAAAGAAGGTCAACAACAGCAAGCTG
AAGTTCACCCTGTCCCTGGTCTCGGCGTGCGTAACGCTCCTCATCAACGG
CGACGAGAACATCTCCTCCAACGTGTCCGCGTGGGTTTTCCCTTTGATGC
TGATCTGCGGTGGTATGGTGACCCTCGTGGACTGGAAGTATCGCCCCAAC
ATCTACGAGACTGCCCTCGAGGGCAGGACGTATTCGAGAATCAACATCCC
CATGTGGATGGGCTGTGCGATCATCGTCGGATGGCTCGTGATACTGATGG
TTTCTCTGACGCTTTTCCCCGACTCGGGGCTGGGGGGACTCTTCAAGTCG
TTCTTCCGCATCGGCTCCATCATCTACGGGGGAGGGCAGGTGGTGTTACC
GATGCTCGTCGATGAGGTGGTCGATCCCGGATGGGTTACCGAGAAGCAGT
TCTTCCAGGGATTCGCTCTAACGCAGGCACGGTCTCTCTTATAG
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