mRNA_A-nodosum_M_contig10.24.3 (mRNA) Ascophyllum nodosum dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_A-nodosum_M_contig10.24.3 vs. uniprot
Match: D7FM30_ECTSI (ABC1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FM30_ECTSI) HSP 1 Score: 673 bits (1736), Expect = 1.480e-230 Identity = 338/460 (73.48%), Postives = 391/460 (85.00%), Query Frame = 1 Query: 16 AIASVAATGIALSDRGRRDAIESVASGAARFGRAFGYATLVSFDFKYSLRNLEKGSDDFEAATKKVNQRAAERLLYVCSKHGGVYTKFGQHVSSMNHVLPKEYTETLKVLQDRNPSVGVEEVARTVRGELGAEICELFREFDQEAIAAASLAQVHRAVTVCGKEVAVKLQYPGLEAQVSKDLIGMRFLAGLVGKIFPEYQYTWLFPDFEETIGLELDFIQEGTNAERVARMFRHRDDVFVPAIHWKYSSRRVLTMDYVHGVKISDRTGIEERGMDSAAVAKTVTHTFGDMMFCHGFVHCDPHPGNLMVRPDPACVS-KAAGGGKVKGKGFGIFMTRER-SVPHQVALLDHGMYRRLDSGFRLTYSALWKALISKDDVLGKQCTAELGVDPEMYDALSLILTWRPATSTARVGQRITEEERLALKAKYKAILTPDNLNAFLERLPRDMLFVMRTSDLERAL 1389 A+AS AATG+AL+DR RRDA+ A+GA RFGRAFGY VS D+KY LRNLE+GSD++EA K+VN RAA+RLL+VCS HGGVYTKFGQ+VSSMNHVLPKE+TETLKVLQDRNPSV + EVARTVR ELGAEI ELFREFD++AIAAASLAQVHRAVT+ G+EVAVKLQYPGLE+QV KDL+GMRFLAGL+G +FPEYQYTWLFP+FEE+I LELDF+QEGTN+ERVARMFR +VFVP+IHW SSRRVLTMD+VHG+KISDR GIE RGMD VA+TVT TFGDM++CHGF+HCDPHPGNLMVRP P+ + KAA G + +G +R SV HQV LLDHGMYRRLD FRLTYS LWKA +++D LG++C +LGV+P +YDALSLILTWRP ++TAR GQRITEEER AL AKYK IL+ D+LNAFLERLPRDMLFVMRTSDL R+L Sbjct: 10 AVASAAATGVALTDRDRRDAVTGAANGAIRFGRAFGYGAAVSLDYKYRLRNLERGSDEYEAVRKEVNLRAAQRLLHVCSIHGGVYTKFGQYVSSMNHVLPKEFTETLKVLQDRNPSVELSEVARTVRRELGAEISELFREFDEKAIAAASLAQVHRAVTLAGEEVAVKLQYPGLESQVHKDLLGMRFLAGLLGAVFPEYQYTWLFPEFEESISLELDFVQEGTNSERVARMFRGNPNVFVPSIHWDLSSRRVLTMDFVHGLKISDREGIERRGMDPTGVARTVTRTFGDMIYCHGFLHCDPHPGNLMVRPKPSSRNAKAAARGTAESEGAARSAAPKRNSVAHQVVLLDHGMYRRLDPDFRLTYSKLWKAFMTRDTALGERCAVDLGVEPGLYDALSLILTWRPTSTTARTGQRITEEERQALVAKYKVILSHDSLNAFLERLPRDMLFVMRTSDLVRSL 469
BLAST of mRNA_A-nodosum_M_contig10.24.3 vs. uniprot
Match: A0A835ZCM7_9STRA (ABC1 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCM7_9STRA) HSP 1 Score: 487 bits (1254), Expect = 1.630e-157 Identity = 268/521 (51.44%), Postives = 329/521 (63.15%), Query Frame = 1 Query: 55 DRGRRDAIESVASGAARFGRAFGYATLVSFDFKYSLRNLEKGSDDFEAATKKVNQRAAERLLY---------------------VCSKHGGVYTKFGQHVSSMNHVLPKEYTETLKVLQDRNPSVGVEEVARTVRGELGAEICELFREFDQEAIAAASLAQVHRAVTVCGKEVAVKLQYPGLEAQVSKDLIGMRFLAGLVGKIFPEYQYTWLFPDFEETIGLELDFIQEGTNAERVA--------------------RMFRHRDDVFVPAIHWKYSSRRVLTMDYVHGVKISDRTGIEERGMDSAAVAKTVTHTFGDMMFCHGFVHCDPHPGNLMVRPDPACVSKAAGGGKVKGKGFGIFMTRERSVPHQVALLDHGMYRRLDSGFRLTYSALWKALISKDDVLGKQCTAELGVDPEMYDALSLILTWRPATSTARVGQRITEEERLALKAKYKAILTPDN-----------------------------------LNAFLERLPRDMLFVMRTSDLERAL 1389 D RD + A G+ RF RA ++ +VS D+K SLR L+ D +E +V+QRAAERL VC KHGGVYTKFGQH++SMNH+LP EYT TL VLQDRNPSV +EEV RT+ ELG I +LF EFD +AIAAASLAQVHRAVT G+EVAVKLQYPGLEAQV +D+ MR LA +G +FPEY+YTWLFP+FEETI LELDF+QEG N ERVA RMF+ R D+ VP +HW YS+RRV+TMD++HG+KI++R IEE G+D VAKTV +FG+M++ HGF+HCDPHPGNLMVR PA + G K + + ++ HQV LLDHGMYRRL+ FRL Y LWKA +++D LGKQ LG+ P+ YDALSL+LTWRPAT+ +G RITEEER L+ KYK +++ +N FLERLPRDMLFV+RTSDL R L Sbjct: 24 DADARDEVVGAARGSTRFARAVYHSCVVSADYKMSLRGLQ--GDAYEVKKAEVHQRAAERLXXXXXXXXXXXXXXXXXXXXXXKVCMKHGGVYTKFGQHIASMNHILPPEYTTTLSVLQDRNPSVPLEEVERTILRELGGSIADLFLEFDAKAIAAASLAQVHRAVTKTGEEVAVKLQYPGLEAQVERDITTMRLLAQAMGTVFPEYEYTWLFPEFEETITLELDFVQEGVNGERVASFNDGDNXXXXXXXXXXXXXRMFKDRQDIAVPKVHWDYSTRRVMTMDFIHGIKITNRQAIEEAGLDPRQVAKTVASSFGEMIYYHGFLHCDPHPGNLMVREMPATKT----GRKSR--------SAKKPKQHQVVLLDHGMYRRLEPDFRLAYCRLWKAFLTRDTKLGKQQAVILGLTPDEYDALSLVLTWRPATTKTPMGTRITEEERARLREKYKGVVSAXXXXXXXXXXXXXXXXAQAEXXXXXXXXXXXXXXXXAVNNFLERLPRDMLFVLRTSDLIRGL 530
BLAST of mRNA_A-nodosum_M_contig10.24.3 vs. uniprot
Match: A0A0G4GUZ7_VITBC (ABC1 domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GUZ7_VITBC) HSP 1 Score: 405 bits (1042), Expect = 2.590e-125 Identity = 211/436 (48.39%), Postives = 294/436 (67.43%), Query Frame = 1 Query: 88 ASGAARFGRAFGYATLVSFDFKYSLRNLEKGSDDFEAATKKVNQRAAERLLYVCSKHGGVYTKFGQHVSSMNHVLPKEYTETLKVLQDRNPSVGVEEVARTVRGELGAEICELFREFDQEAIAAASLAQVHRAVTVCG-KEVAVKLQYPGLEAQVSKDLIGMRFLAGLVGKIFPEYQYTWLFPDFEETIGLELDFIQEGTNAERVARMFRHRDDVFVPAIHWKYSSRRVLTMDYVHGVKISDRTGIEERGMDSAAVAKTVTHTFGDMMFCHGFVHCDPHPGNLMVRPDPACVSKAAGGGKVKGKGFGIFMTRERSVPHQVALLDHGMYRRLDSGFRLTYSALWKALISKDDVLGKQCTAELGVDPEMYDALSLILTWRPATST-ARVGQRITEEERLALKAKYKAILTPDNLNAFLERLPRDMLFVMRTSDLERAL 1389 A G +RF R+ A +V++D+K SLR L++ SD+++ K + RAA+RLL VC HGG+Y KFGQ+++++NH+LP EY TL VL D+ + ++ + +R +LG E F F++E IAAASLAQVHRAV +EVAVKLQYPGL AQV D + M+ L +GK FP Y+YTWLFP+FE + +ELDF QEG NA+R+A+MF HR+DV VP + W ++ RVLTM+++ G+K++D+ +E+ G+ VA V FG MM HGFVHCDPHPGNLMVRP A S AA G KG V Q+ +LDHGMYRRL+ FR YS LWKAL+ +D+ +G+Q +L +D + +D LSLILT+RP S ++GQR+ EE+R +K K+K T + +N FL+ LPRD+L++ RT+++ R+L Sbjct: 65 AQGFSRFIRSSYNAAIVAWDYKSSLRGLDEHSDEYKRIQKDCHLRAAKRLLSVCRAHGGLYNKFGQYIATLNHILPDEYVTTLSVLHDKAQHLPWNDIEKVIRQDLGGSFEEHFAAFEEEPIAAASLAQVHRAVRRSDLQEVAVKLQYPGLRAQVKGDTLTMKVLLWCLGKAFPAYEYTWLFPEFEHNMRMELDFAQEGYNADRLAKMFAHREDVHVPKVDWTLTTPRVLTMEFIKGLKVTDKDALEKAGIHPKDVAHLVCEVFGQMMHIHGFVHCDPHPGNLMVRPMGADSSGAAEGSPPKG------------VRPQLVVLDHGMYRRLEPSFRHAYSRLWKALVMQDEHVGRQACVDLNLDEDAFDMLSLILTFRPTKSKFTKLGQRMHEEDRKVVKEKFKKT-TAEAINDFLKSLPRDILYIFRTTNIVRSL 487
BLAST of mRNA_A-nodosum_M_contig10.24.3 vs. uniprot
Match: A0A0G4FH32_9ALVE (ABC1 domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4FH32_9ALVE) HSP 1 Score: 393 bits (1009), Expect = 4.370e-120 Identity = 203/434 (46.77%), Postives = 288/434 (66.36%), Query Frame = 1 Query: 91 SGAARFGRAFGYATLVSFDFKYSLRNLEKGSDDFEAATKKVNQRAAERLLYVCSKHGGVYTKFGQHVSSMNHVLPKEYTETLKVLQDRNPSVGVEEVARTVRGELGAEICELFREFDQEAIAAASLAQVHRAVTVCGKEVAVKLQYPGLEAQVSKDLIGMRFLAGLVGKIFPEYQYTWLFPDFEETIGLELDFIQEGTNAERVARMFRHRDDVFVPAIHWKYSSRRVLTMDYVHGVKISDRTGIEERGMDSAAVAKTVTHTFGDMMFCHGFVHCDPHPGNLMVRPDPACVSKAAGGGKVKGKGFGIFMTRERSVPHQVALLDHGMYRRLDSGFRLTYSALWKALISKDDVLGKQCTAELGVDPEMYDALSLILTWRPATST-ARVGQRITEEERLALKAKYKAILTPDNLNAFLERLPRDMLFVMRTSDLERAL 1389 SG RF R YA + + D+K SLRNL+ S+++++ KK++QR AERLLY C KHGG+Y KFGQ+V+++NHVLP+EYT TLKVL D+ + + R + E G + FREF+ E IAAASLAQVHRAV GKEVAVKLQYP L +Q+S D + M+ L L+GK +P+Y+Y+WLFP+FE+ I EL F QEG NA RV+R+F V+VP I W ++ RVLTM++V GVKI+D+ G++ + + VA ++ FGDMM HGFVHCDPHPGN++VRP P+ ++ G +VP Q+ LLDHGMYRRL FR Y LW+AL+++D+ +G++ LG+D ++ LSL+ T+R + S R+G R+ +E+R + + T ++N FL LPRD+L+V+R +++ R+L Sbjct: 98 SGTTRFVRTCFYAGISALDYKLSLRNLDPDSEEYKSVQKKIHQRCAERLLYCCKKHGGIYNKFGQYVATLNHVLPEEYTNTLKVLHDQALHLPWSGIRRVFKEEFGEDPETFFREFEFEPIAAASLAQVHRAVRHNGKEVAVKLQYPHLRSQISSDFLTMKLLMFLLGKAYPDYEYSWLFPEFEQNIRHELSFRQEGFNASRVSRLFEDNPKVYVPKIEWDLTTDRVLTMEFVRGVKINDKEGLKNMDVKGSEVAPLLSEVFGDMMHFHGFVHCDPHPGNILVRPLPSRERRSDGS----------------AVP-QIVLLDHGMYRRLTPDFRKGYCQLWEALVTQDESVGREAAIRLGLDERGFELLSLVFTFRSSKSKRTRLGSRMHDEDRQRARDSIQGT-TAGDINEFLRGLPRDVLWVLRATNIVRSL 513
BLAST of mRNA_A-nodosum_M_contig10.24.3 vs. uniprot
Match: A0A7S2RKL7_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RKL7_9STRA) HSP 1 Score: 370 bits (949), Expect = 6.180e-113 Identity = 204/495 (41.21%), Postives = 295/495 (59.60%), Query Frame = 1 Query: 67 RDAIESVASGAARFGRAFGYATLVSFDFKYSLRNLEKGSD--DFEAATKKVNQRAAERLLYVCSKHGGVYTKFGQHVSSMNHVLPKEYTETLKVLQDRNPSVGVEEVARTVRGELGAEICELFREFDQEAIAAASLAQVHRAVTV-CGKEVAVKLQYPGLEAQVSKDLIGMRFLAGLVGKIFPEYQYTWLFPDFEETIGLELDFIQEGTNAERVARMFRHRDDVFVPAIHWKYSSRRVLTMDYVHGVKISDRTGIEERGMDSAAVAKTVTHTFGDMMFCHGFVHCDPHPGNLMVRPDP--------------AC---------VSKAAGGGK--------------VKGKGFGIFMTRERSVP----------HQVALLDHGMYRRLDSGFRLTYSALWKALISKDDVLGKQCTAELGVDPEMYDALSLILTWRPATSTARVGQRITEEERLALKAKYKAILTPDNLNAFLERLPRDMLFVMRTSDLERALILIL 1401 R+A+ + G R R G + + D+K SL NL+K D ++ ++VN+RAA+RL VC ++GG+YTKFGQ ++++NHVLP+E+ +TL LQD+ + + + ELG + LF EFD + +AAASLAQVHRAV +EVA+K+QYP L+ QV D+ ++ + VG FP+ Y+WL P+FE + LELDF QEG N ER+A++F HR DV+VP IHW +++R+L M+YVHG KI+D +E++G++ VA TV+ FGDM+ HGF HCDPHPGNLM+RP P C + AG G V G+ + E S +Q+ +LDHGMYRR + FR TY LW++L+ D GKQ +LGV + YD LSLI T RPA S ++G+R+ + ER ++A++K + D +N FL+ LPRD+LFV+R +++ R++ L L Sbjct: 40 REAVPNSWMGLLRLTRTCGNVLVTAVDYKVSLHNLDKEEDYETYKDTLRRVNKRAAKRLYNVCKQNGGLYTKFGQTIANLNHVLPEEFVKTLAPLQDKALEMEPQVALDAINKELGQDWSNLFSEFDSKPVAAASLAQVHRAVLKHSNEEVAIKIQYPYLQDQVQGDIATLKIITDFVGFFFPDNSYSWLTPEFENNMALELDFQQEGRNGERLAQLFSHRKDVYVPRIHWPLTTKRMLIMEYVHGDKITDLDSLEDKGINPLEVAATVSAVFGDMIHVHGFAHCDPHPGNLMIRPAPKPKLFDTMYAKLSWTCFLTVPVAMVAATIAGPGSIVAYYGAATALAATVTGEIVSLLSADENSKKISNGGKNGEAYQLVILDHGMYRRFEPEFRTTYCQLWQSLLMADIKHGKQAAIKLGVPSDGYDVLSLIFTHRPANSQTKIGKRMQKAEREKMRAQFKDVSAAD-INVFLQNLPRDLLFVLRCTNIVRSINLSL 533
BLAST of mRNA_A-nodosum_M_contig10.24.3 vs. uniprot
Match: A0A4D9CRE9_9STRA (ABC1 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CRE9_9STRA) HSP 1 Score: 365 bits (937), Expect = 7.420e-111 Identity = 188/432 (43.52%), Postives = 279/432 (64.58%), Query Frame = 1 Query: 103 RFGRAFGYATLVSFDFKYSLRNLEKGSDDFEAATKKVNQRAAERLLYVCSKHGGVYTKFGQHVSSMNHVLPKEYTETLKVLQDRNPSVGVEEVARTVRGELGAEICELFREFDQEAIAAASLAQVHRAVTVCGKEVAVKLQYPGLEAQVSKDLIGMRFLAGLVGKIFPEYQYTWLFPDFEETIGLELDFIQEGTNAERVARMFRHRDDVFVPAIHWKYSSRRVLTMDYVHGVKISDRTGIEERGMDSAAVAKTVTHTFGDMMFCHGFVHCDPHPGNLMVR-PDPACVSKAAGGGKVKGKGFGIFMTRERSVPHQVALLDHGMYRRLDSGFRLTYSALWKALISKDDVLGKQCTAELGVDPEMYDALSLILTWRPATSTARVGQRITEEERLALKAKYK--AILTPDNLNAFLERLPRDMLFVMRTSDLERAL 1389 R GR Y L + D+K+SL LE G++ ++ +V+ RAA+R+LYVC + GGV+ K GQ++SS+ +LP E+T+TL+VLQD+NP E+V R + +LG +LF F + IAAASLAQVHRA T G EVAVK+QYP L +QV D ++ LA +VG +F +++YTWLFP+ EE++ LELDF+QE TN ERV R+ + +P + W SS RVLTM+++ GVK++D ++ G+D AV +T+++ F M+F G VHCDPHPGNL++R P P + +++G G+ E V LLDHG+YRRLD FR +Y LWKA +++D LG+ T +G+D + ++ LS+I R TS +G++++E ER ++ KY+ + + L +E LPRD+LFV+R++ L R+L Sbjct: 66 RAGRTLSYGLLTAADYKFSLAGLEPGTEKYKEKQSEVHLRAAQRILYVCQRQGGVFVKAGQYISSLVKILPDEFTDTLRVLQDKNPGESFEDVCRVLEEDLGVPWHQLFAAFSPKPIAAASLAQVHRATTHDGDEVAVKIQYPRLASQVESDFFTLKVLATVVGAMFRDWEYTWLFPELEESVHLELDFLQEATNGERVGRLLERDGRIHIPRVRWDLSSARVLTMEFIDGVKVTDVGRLKASGIDPRAVGETISNLFSLMVFSLGLVHCDPHPGNLLIRHPPPPPSAPRRWAWRLQGL-LGLRPNFE------VVLLDHGLYRRLDESFRQSYCNLWKAFVTRDAGLGRAATRAMGLDEDFFELLSIISVNRTPTSRNGLGEQMSESERKRIREKYRDRSKYGAEQLKKLIESLPRDVLFVLRSNSLVRSL 490
BLAST of mRNA_A-nodosum_M_contig10.24.3 vs. uniprot
Match: A0A7S1G966_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G966_9STRA) HSP 1 Score: 359 bits (921), Expect = 3.660e-110 Identity = 205/460 (44.57%), Postives = 284/460 (61.74%), Query Frame = 1 Query: 67 RDAIESVASGAARFGRAFGYATLVSFDFKYS----LRNLEKGSDD--------------FEAATKKVNQRAAERLLYVCSKHGGVYTKFGQHVSSMNHVLPKEYTETLKVLQDRNPSVGVEEVARTVRGELGAEICELFREFDQEAIAAASLAQVHRAVTVCGKEVAVKLQYPGLEAQVSKDLIGMRFLAGLVGKIFPEYQYTWLFPDFEETIGLELDFIQEGTNAERVARMFRHRDDVFVPAIHWKYSSRRVLTMDYVHGVKISDRTGIEERGMDSAAVAKTVTHTFGDMMFCHGFVHCDPHPGNLMVRPDPACVSKAAGGGKVKGKGFGIFMTRERSVPHQVALLDHGMYRRLDSGFRLTYSALWKALISKDDVLGKQCTAELGVDPEMYDA-LSLILTWRPATSTARVGQRITEEERLALKAKYKAILTPDNLNAFLERLPRDMLFVMRTSDLERAL 1389 RD++ A GA RFG ++ V+ +K + L ++G+D ++ A + + A+ RL+ VC +HGGVYTKFGQ++SSMNHVLPKE+T+T+ VLQD+ P + +E+VA V ELGA + ELF FD E I AAS+AQVHRA T G++VAVK+QY GL QV+ D+ MR L +G FPE++YTWLFP+FEE + LE++F QEG N +R+ MF R DV+VP +HW SS RVLTM+Y+ GVK+ + G++ A +A+ ++ F DM+ HGFVHCDPHPGNL VR + GGGK P Q+ ++DHGMYRRL FR+ Y LWKA+I +D+ L + ELGV Y A L +I T+R +S A++G+ + +E L+ K I D +NAFLE +PRD+LFV R+ +L R+L Sbjct: 4 RDSVAQRADGARRFGVTAYHSARVAVVYKTAAMKHLPREKRGADGKHSDAYNEARRAPAYQEALRAAHLEASGRLMRVCKQHGGVYTKFGQYISSMNHVLPKEFTDTMSVLQDKAPRMTMEDVAGVVETELGAPLTELFESFDAEPIGAASIAQVHRARTRDGRDVAVKIQYRGLPRQVAGDITTMRLLVRALGLAFPEFEYTWLFPEFEENLKLEMNFEQEGRNGDRLRAMFAGRPDVYVPRVHWDLSSTRVLTMEYIDGVKVDKPGRLVAMGIEPAVIAQKISTVFSDMVLYHGFVHCDPHPGNLFVR-----LVTPEGGGK--------------PFP-QLVVIDHGMYRRLTESFRVAYCKLWKAMILRDNALLVEAARELGVGK--YAAFLPVIFTFRTMSSKAKLGRFMNTQEVAELRDMAKDITWGD-VNAFLEAMPRDILFVTRSMNLVRSL 440
BLAST of mRNA_A-nodosum_M_contig10.24.3 vs. uniprot
Match: A0A1Y1IGU3_KLENI (Protein kinase superfamily n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IGU3_KLENI) HSP 1 Score: 339 bits (869), Expect = 5.610e-102 Identity = 182/439 (41.46%), Postives = 271/439 (61.73%), Query Frame = 1 Query: 76 IESVASGAARFGRAFGYATLVSFDFKYSLRNLEKGSDDFEAATKKVNQRAAERLLYVCSKHGGVYTKFGQHVSSMNHVLPKEYTETLKVLQDRNPSVGVEEVARTVRGELGAEICELFREFDQEAIAAASLAQVHRAVTVC-GKEVAVKLQYPGLEAQVSKDLIGMRFLAGLVGKIFPEYQYTWLFPDFEETIGLELDFIQEGTNAERVARMFRHRDDVFVPAIHWKYSSRRVLTMDYVHGVKISDRTGIEERGMDSAAVAKTVTHTFGDMMFCHGFVHCDPHPGNLMVRPDPACVSKAAGGGKVKGKGFGIFMTRERSVPHQVALLDHGMYRRLDSGFRLTYSALWKALISKDDVLGKQCTAELGVDPEMYDALSLILTWRPATSTARVGQRITEEERLALKAKYKAILTPDNLNAFLERLPRDMLFVMRTSDLERAL 1389 I + G R RA L S D+KY+LR+++K +D+++ KV+QR+A+R+L +C K+ G Y K GQ ++S+ + P+EYT+TL VLQD+ +++ + + ELG+ E+F EFD IAAASLAQVHRAV G+EVAVK+QYPGL+ Q D+ M L+ + +FPEYQ+TWL P+F+ + ELDF +EG NAER A F HR D+ +P + W ++++RVLTM++VHG KISDR IE G+++ AV+ + F +M+FCH +VH DPHPGN++VR A ++ LLDHG+YR++D FR + LW+AL+ +D K LG + Y +I T R +S +++G+ +++ ER AL+ + +A T +L+AF+ERLPRDML V+RT L R++ Sbjct: 66 IRTGGQGVLRSSRAIRAFVLNSLDYKYTLRDMDKMTDEYDELRAKVHQRSAKRILQLCEKNTGTYVKAGQFLASLQGI-PREYTQTLSVLQDQAKYQTFDKIDKVIAQELGSSATEIFAEFDPVPIAAASLAQVHRAVLKSTGQEVAVKVQYPGLQQQFETDITTMHVLSKAIAWLFPEYQFTWLVPEFQSNLQKELDFHEEGKNAERAAANFAHRKDLKIPEVLWDHTTKRVLTMEFVHGCKISDRAAIERLGLNAQAVSSLLVEIFAEMVFCHAWVHADPHPGNILVRQVGTAKKPRA----------------------EIVLLDHGLYRQIDERFRADFCQLWRALVLQDRAKMKIYGDRLGAG-DYYKYFPVIFTGRSFSSKSKLGEGMSDAERAALREEVRAF-TMGDLSAFMERLPRDMLTVLRTDGLVRSI 479
BLAST of mRNA_A-nodosum_M_contig10.24.3 vs. uniprot
Match: A0A2R5GPD9_9STRA (ABC1 family protein MCP2-like n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GPD9_9STRA) HSP 1 Score: 330 bits (847), Expect = 5.900e-99 Identity = 210/505 (41.58%), Postives = 276/505 (54.65%), Query Frame = 1 Query: 43 IALSDRGRRDAIESVASGA---ARFGRAFGYATLVSFDFKYSLRNLEKG--SDDFEAATKKVNQRAAERLLYVCSKHGGVYTKFGQHVSSMNHVLPKEYTETLKVLQDRNPSVGVEEVARTVRGELGAEICE-LFREFDQEAIAAASLAQVHRAVT-VCGKEVAVKLQYPGLEAQVSKDLIGMRFLAGLVGKIFPEYQYTWLFPDFEETIGLELDFIQEGTNAERVARMFRHRDDVFVPAIHWKYSSRRVLTMDYVHGVKISDRTGIEERGMDSAAVAKTVTHTFGDMMFCHGFVHCDPHPGNLMVRPDP------------------------------------ACVSKAAGGG---------KVKGKGFGIFMTRERSVPHQVALLDHGMYRRLDSGFRLTYSALWKALISKDDVLGKQCTAELGVDPEMYDALSLILTWRPATSTARVGQRITEEERLALKAKYKAILTPDNLNAFLERLPRDMLFVMRTSDLERALILIL 1401 + +D R+A+ + G+ RFGR A + + D+K ++ +K D ++ A + RAA RL VC+++GG+YTK+GQ V+SMNHVLP+E T+TL LQDR S+ E TV ELG E +F FD E IA+ASLAQVHRAV G+ VAVK+QYP L Q DL +R L VG FP++ Y+WL P F + + LELDFIQEG N+ER+ +MF +R DV+VP I WK+SSRR+L M+YV GVKIS +G+ VA TV+ FGDM+ HGFVHCDPHPGNL VR P A ++ + GG + K FG ++ VP+QV +LDHGMYRRLD FR Y LWKAL+ +D LG+ LGV + YD R LK KYK + D +N FLE LPRD+LFVMR++++ R + L L Sbjct: 20 VGATDADAREAVRVASQGSDGLVRFGRTCFNAFVTAVDWKVTMYGKDKDIDKDAYKEALHAFSLRAAARLYKVCNRNGGLYTKYGQGVASMNHVLPQEITDTLAPLQDRAKSMSSEMARETVAAELGPLALEDVFASFDPEPIASASLAQVHRAVLRETGETVAVKVQYPYLREQTRGDLATLRMLTDFVGYWFPDFSYSWLTPAFADNMTLELDFIQEGRNSERLGQMFANRADVYVPKIIWKHSSRRMLIMEYVEGVKISKVDEFAAQGIHPLEVATTVSSLFGDMIHVHGFVHCDPHPGNLFVRKAPERSVWSNFGFVSTVSLLVAGASTLYAAPLIGPAAPLAALALTSAGGLSSLVAAYKAQRVKTFG----GKQGVPYQVVVLDHGMYRRLDPSFRKNYCMLWKALLLRDANLGRTAAMNLGVSKDAYD-------------------------RAKLKDKYKDVNAGD-INKFLESLPRDLLFVMRSTNIVRGINLAL 494
BLAST of mRNA_A-nodosum_M_contig10.24.3 vs. uniprot
Match: A0A6A3NK93_9STRA (ABC1 domain-containing protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3NK93_9STRA) HSP 1 Score: 327 bits (839), Expect = 3.410e-98 Identity = 186/451 (41.24%), Postives = 263/451 (58.31%), Query Frame = 1 Query: 43 IALSDRGRRDAIESVASGAARFGRAFGYATLVSFDFKYSLRNLEKGSDDFEAATKKVNQRAAERLLYVCSKHGGVYTKFGQHVSSMNHVLPKEYTETLKVLQDRNPSVGVEEVARTVRGELGAEICELFREFDQEAIAAASLAQVHRAVTVCGKEVAVKLQYPGLEAQVSKDLIGMRFLAGLVGKIFPEYQYTWLFPDFEETIGLELDFIQEGTNAERVARMFRHRDDVFVPAIHWKYSSRRVLTMDYVHGVKISDRTGIEERGMDSAAVAKTVTHTFGDMMFCHGFVHCDPHPGNLMVR--PDPACVSKAAGGGKVKGKGFGIFMTRERSVPHQVALLDHGMYRRLDSGFRLTYSALWKALISKDDVLGKQCTAELGVDPEMYDALSLILTWRPATSTARVGQRITEEERLALKAKYKAILTPDNLNAFLERLPRDMLFVMRTSDLERAL 1389 +AL G A E+ A +R R F V +D++ R E+ D+ + +N+R A+RLL +C ++GGVYTK GQ +++ NH LP+EYTETL LQDR V EE RT+ E+G ELFREFD+ +A+ASLAQVHRAV G+E+AVK+QYP LEAQ+ D+ +++ L FP+ Q WL+P+F+ + ELDF E N+ R+A +H +V VP ++ + SS+R+++M+++ KIS I E G+D VA+ + F +M+FCHGFVHCDPH GN+ VR PDP K Q+ LLDHG+YR LD FR TY LW+A++++D L + C L V E+ L L+LT+R R+ ++E ER AL K + + FLE+LPRDMLFV RT+++ RAL Sbjct: 18 LALLSGGAYAADEANAKIFSRSLRVFATGGHVLWDYRRHFRGTERDDPDYRPKLQSLNERIAQRLLRLCFQNGGVYTKLGQQLATFNHGLPREYTETLAQLQDRAKPVPFEEAKRTIEAEMGRPWQELFREFDRTPVASASLAQVHRAVDHQGRELAVKVQYPHLEAQMEADIRVIKWAFQLTEFCFPDVQIQWLYPEFKRALLSELDFENEKNNSRRIAACLKHNRNVHVPVVYDELSSKRMMSMEFIAAPKISQIEAIRELGLDPPQVARALCEVFSEMVFCHGFVHCDPHAGNIFVRRNPDPQAEHK-----------------------EQLVLLDHGLYRELDGEFRKTYCDLWRAMLTRDSALLEDCGKRLNVG-ELSKYLPLLLTYRTINHKGRLDTSMSESERKALAEDLKGMRF-STVTDFLEQLPRDMLFVFRTNNMIRAL 443 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig10.24.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig10.24.3 >prot_A-nodosum_M_contig10.24.3 ID=prot_A-nodosum_M_contig10.24.3|Name=mRNA_A-nodosum_M_contig10.24.3|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=404bp MNHVLPKEYTETLKVLQDRNPSVGVEEVARTVRGELGAEICELFREFDQEback to top mRNA from alignment at A-nodosum_M_contig10:259041..276517- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig10.24.3 ID=mRNA_A-nodosum_M_contig10.24.3|Name=mRNA_A-nodosum_M_contig10.24.3|organism=Ascophyllum nodosum dioecious|type=mRNA|length=17477bp|location=Sequence derived from alignment at A-nodosum_M_contig10:259041..276517- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig10:259041..276517- >mRNA_A-nodosum_M_contig10.24.3 ID=mRNA_A-nodosum_M_contig10.24.3|Name=mRNA_A-nodosum_M_contig10.24.3|organism=Ascophyllum nodosum dioecious|type=CDS|length=1212bp|location=Sequence derived from alignment at A-nodosum_M_contig10:259041..276517- (Ascophyllum nodosum dioecious)back to top |