mRNA_A-nodosum_M_contig1.154.2 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig1.154.2 vs. uniprot
Match: D7FT60_ECTSI (Nitroreductase-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT60_ECTSI) HSP 1 Score: 374 bits (961), Expect = 2.120e-125 Identity = 195/259 (75.29%), Postives = 218/259 (84.17%), Query Frame = 2
Query: 254 DSDAGAFERITLARRATKRFERR-PVPDVVLKKVLGLVLRAPSGFNIQPYECVVVTSDEAKQKLSKAMLGENQQRVLDAGATVVFASDLNSMQNVKKLRTLLEKEGWPKEFIKSFSLYLSVFSTGHSRLFRLPLVVAKRVSFAIAGRLGKPMPTVAGAETWAFKNTMLAVQASQSRQSSSEELLLAATSCGVASCPMEGFDMRRLRRELGIPLRYSVPIVVSLGYPSKAERDFKTLRFAPEEVFHRDEFGTTLEGVPVL 1027
DSDA AFER+TLARR+TK F+RR PVPD VLKKVL LVLRAPSGFNIQPYEC+VVTSDEAK KLS+AMLG N++RVL AGATVVFASDLNSM+NV+KL T+L KEGWP+ FIK LYLSVFSTGH+RL RLPLV AK++SFA+ RLGK MPTV+GAE WAFK+TMLAVQ ELLLAATS G+A+CPMEGFDMRRLR+ L IPLRYSVPIVVS+GYPS R+ KTLRF PEEV HR+EFGT LEGVP L
Sbjct: 69 DSDAEAFERVTLARRSTKHFDRRRPVPDDVLKKVLALVLRAPSGFNIQPYECIVVTSDEAKHKLSRAMLGPNRERVLAAGATVVFASDLNSMKNVRKLTTMLAKEGWPEGFIKKVPLYLSVFSTGHNRLLRLPLVAAKKLSFAVVRRLGKGMPTVSGAEAWAFKSTMLAVQ----------ELLLAATSHGLATCPMEGFDMRRLRKALRIPLRYSVPIVVSIGYPSDDRREIKTLRFPPEEVLHREEFGTPLEGVPSL 317
BLAST of mRNA_A-nodosum_M_contig1.154.2 vs. uniprot
Match: A0A835Z5B9_9STRA (Nitroreductase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5B9_9STRA) HSP 1 Score: 232 bits (591), Expect = 1.610e-70 Identity = 122/245 (49.80%), Postives = 172/245 (70.20%), Query Frame = 2
Query: 269 AFERITLARRATKRFERRPVPDVVLKKVLGLVLRAPSGFNIQPYECVVVTSDEAKQKLSKAMLGENQQRVLDAGATVVFASDLNSMQNVKKLRTLLEKEGWPKEFIKSFSLYLSVFSTGHSRLFRLPLVVAKRVSFAIAGRLGKPMPTVAGAETWAFKNTMLAVQASQSRQSSSEELLLAATSCGVASCPMEGFDMRRLRRELGIPLRYSVPIVVSLGYPSKAERDFK-TLRFAPEEVFHRDEFG 1000
AF+ I+ AR A K F PVP VL+ +L + LRAPS FN+QPY+ +V+ S ++KQ LSKAML N++RVLDAGATVVFA+D N M+++ K+ + ++ G F++ LY++VFS+GH+R+ R + K+V F+IA RLG +P V AE WAFKNTMLAV+A +LAA + G+A+CPMEGFD R+LR++ IP RYSVP+VVS+GYP ++R K + RF PE+VF+ +++G
Sbjct: 14 AFKAISDARYANKEFSPEPVPAEVLQDLLQVTLRAPSAFNVQPYKALVINSPQSKQLLSKAMLSTNKKRVLDAGATVVFAADKNCMKDIGKVVDMFKEGGSNAAFVRKIPLYVAVFSSGHNRVLRPIMTFIKQVVFSIARRLGLELPPVNSAEAWAFKNTMLAVEA----------FMLAAAANGLATCPMEGFDPRQLRKQFHIPRRYSVPVVVSIGYPKPSDRPLKQSRRFPPEQVFYDNQWG 248
BLAST of mRNA_A-nodosum_M_contig1.154.2 vs. uniprot
Match: A0A6H5L6J9_9PHAE (Nitroreductase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6J9_9PHAE) HSP 1 Score: 185 bits (469), Expect = 4.930e-54 Identity = 96/137 (70.07%), Postives = 108/137 (78.83%), Query Frame = 2
Query: 551 LLEKEGWPKEFIKSFSLYLSVFSTGHSRLFRLPLVVAKRVSFAIAGRLGKPMPTVAGAETWAFKNTMLAVQASQSRQSSSEELLLAATSCGVASCPMEGFDMRRLRRELGIPLRYSVPIVVSLGYPSKAERDFKTLR 961
+L +EGWPK FI LYLSVFSTGH+RL RLPLV AK++SFA+ RLGK MPTV+GAE WAFKNTMLAVQ ELLLAATS G+A+CPMEGFDMRRLR+ L IPLRYSVPIVVS+GYPS R+ KTLR
Sbjct: 1 MLAEEGWPKGFINKVPLYLSVFSTGHNRLLRLPLVAAKKLSFAVVRRLGKGMPTVSGAEAWAFKNTMLAVQ----------ELLLAATSHGLATCPMEGFDMRRLRKALRIPLRYSVPIVVSIGYPSDDRREIKTLR 127
BLAST of mRNA_A-nodosum_M_contig1.154.2 vs. uniprot
Match: A0A6V1NJ53_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NJ53_HETAK) HSP 1 Score: 176 bits (447), Expect = 6.050e-48 Identity = 96/244 (39.34%), Postives = 149/244 (61.07%), Query Frame = 2
Query: 272 FERITLARRATKRFERRPVPDVVLKKVLGLVLRAPSGFNIQPYECVVVTSDEAKQKLSKAMLG-ENQQRVLDAGATVVFASDLNSMQNVKKLRTLLEKEGWPKEFIKSFSLYLSVFSTGHSRLFRLPLVVAKRVSFAIAGRLGKPMPTVAGAETWAFKNTMLAVQASQSRQSSSEELLLAATSCGVASCPMEGFDMRRLRRELGIPLRYSVPIVVSLGYPSKAERDFK-TLRFAPEEVFHRDEF 997
F + + RR+ ++F P+PD + ++ L RAPSGFN+QPY V+V S+E K+ L+ AMLG N++RVL+A T VFASDL ++++V+++ LL +G PK + L++FS GH L RLP ++ ++++F + P V+ ETWA KNTMLAVQ +LA+ + G+ + PMEG+D RR+RR L +P R++VP+VV+ GYP + + + R+ + V D F
Sbjct: 76 FREVVMGRRSVRKFLPNPIPDETMDHIIDLTQRAPSGFNVQPYVIVLVKSEETKRALADAMLGASNKRRVLEAPVTAVFASDLENLRHVRRVEGLLRAQGLPKAAVDLARPGLTIFSGGHRALLRLPSLIVRKLAFRPVSLI-TASPKVSTPETWAVKNTMLAVQ----------NYMLASVAYGLNTAPMEGYDARRVRRALKLPRRFTVPLVVATGYPGDLDEEAAPSARWPRDRVVFSDRF 308
BLAST of mRNA_A-nodosum_M_contig1.154.2 vs. uniprot
Match: A0A6G0XIZ5_9STRA (Nitroreductase domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XIZ5_9STRA) HSP 1 Score: 154 bits (390), Expect = 7.760e-41 Identity = 97/247 (39.27%), Postives = 133/247 (53.85%), Query Frame = 2
Query: 263 AGAFERITLARRATKRFERRPVPDVVLKKVLGLVLRAPSGFNIQPYECVVVTSDEAKQKLSKAMLGENQQRVLDAGATVVFASDLNSMQNVKKLRTLLEKEGWPKEFIKSFSLYLSVFS-TGHSRLFRLPLVVAKRVSFAIAGRLGKPMPTVAGAETWAFKNTMLAVQASQSRQSSSEELLLAATSCGVASCPMEGFDMRRLRRELGIPLRYSVPIVVSLGYPSKAERDFKTLRFAPEEVFHRDEFG 1000
A AF + RR+ +++ +P+P +L+ VL RAPSGFN+QPY CVVV + + +LS AMLG+N ++V DA VFASDL + V ++ L+E G I + L F GH L R + A + +PT A W++K+TMLAV +LA S G+ +C MEGFD RLR L IP RYSVP+VV+ GYP ++ + TLR P EVF +FG
Sbjct: 2 AQAFRALARQRRSVYQYQNKPIPKEILEDVLQTTQRAPSGFNLQPYACVVVQDPDERAQLSTAMLGDNIRKVKDAPLVAVFASDLEPSKRVPAIQQLMETAGQSTADIHQLPMKLRFFGGEGH-------LAGLIRSGISAAFTPFQAVPTYAPTIAWSYKSTMLAVT----------HYVLALESHGIGTCVMEGFDETRLRHALDIPDRYSVPVVVTAGYPVESTKPL-TLRLDPNEVFFDGKFG 230
BLAST of mRNA_A-nodosum_M_contig1.154.2 vs. uniprot
Match: A0A3R7NF45_9STRA (Nitroreductase domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7NF45_9STRA) HSP 1 Score: 155 bits (393), Expect = 9.060e-41 Identity = 102/279 (36.56%), Postives = 147/279 (52.69%), Query Frame = 2
Query: 200 LRLAPARPLAKVPKVGVRDSDAGAFERITLA---RRATKRFERRPVPDVVLKKVLGLVLRAPSGFNIQPYECVVVTSDEAKQKLSKAMLGENQQRVLDAGATVVFASDLNSMQNVKKLRTLLEKEGWPKEFIKSFSLYLSVFSTGHSRLFRLPLVVAKRVSFAIAGRLG--KPMPTVAGAETWAFKNTMLAVQASQSRQSSSEELLLAATSCGVASCPMEGFDMRRLRRELGIPLRYSVPIVVSLGYPSKAERDFK-TLRFAPEEVFHRDEFGTTLEGV 1018
L L+P + + R S + A +++ A R A K F PVP+ L+++L L LRAP+GFN QPY CVVV ++KL++AM+ N ++V +A VVFA+D + V +L+ L G + + + + +FS G V A + AIA + +P P+ E WAFK T A LL AA GVA+CPMEGFD R+R L IP RY +P+V++LGYP+ A K ++R P EVF +FG + EG+
Sbjct: 3 LHLSPCTRFLRRSALQARWSSSSAQKKLGAAIQDRYACKAFLPDPVPEQTLQEILKLTLRAPTGFNTQPYACVVVRKQADREKLAEAMMASNVRKVKEAPVVVVFAADCEPTKRVPRLQKLAADNGASTDLVNNLPHVVRLFS-GEG-------VAASGIRAAIATAVSPLQPAPSNVSTEAWAFKQTTFAAAT----------LLYAAQEHGVATCPMEGFDQIRVRNALDIPDRYGIPVVIALGYPNPATAPTKPSVRLQPTEVFFDGKFGQSSEGI 263
BLAST of mRNA_A-nodosum_M_contig1.154.2 vs. uniprot
Match: A0A4D9DF56_9STRA (Nitroreductase domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DF56_9STRA) HSP 1 Score: 156 bits (395), Expect = 1.180e-40 Identity = 98/265 (36.98%), Postives = 148/265 (55.85%), Query Frame = 2
Query: 269 AFERITLARRATKRFE-RRPVPDVVLKKVLGLVLRAPSGFNIQPYECVVVTSDEAKQKLSKAMLGENQQRVLDAGATVVFASDLNSMQNVKKLRTL-LEKEGWPKEFIKSFSLYLSVFS-TGHSRLFRLPLVVAKRVSFAIAGRLGKPMPTVAGAETWAFKNTMLAVQASQSRQSSSEELLLAATSCGVASCPMEGFDMRRLRRELGIPL-RYSVPIVVSLGY--------PSKAERDFKTLRFAPEEVFHRDEFGTTLEGVPVL 1027
AF+R LAR +TK F+ +R + D L +L L LR P+ FN+QPY +V S++ KQKL+ MLG N RVL A T VFA+DL+ +Q V ++++L K G P+ ++ + ++ + GH L A + F A +PMP+V+ E W++KNT +A +L+ + G+ +CPMEGFD RR+ EL IP RY++P+VVS G+ P + E K+ RF PE V +D++G +G+ L
Sbjct: 75 AFKRAVLARHSTKAFDAKREIADETLAAILALTLRCPTSFNVQPYTVTIVQSEDMKQKLAACMLGPNSARVLQAPVTAVFAADLDPVQLVPRVQSLERRKRGLPEAYLATLPFSVAFLAGKGH-------LAHAFKDLFTTAMSPLQPMPSVSTLEAWSYKNTAIAAS----------WYMLSCSVHGLDTCPMEGFDGRRIMHELHIPASRYAIPLVVSTGFAMPLPSSSPERNEEAKKSPRFPPEAVVFKDQYGHAYKGISQL 322
BLAST of mRNA_A-nodosum_M_contig1.154.2 vs. uniprot
Match: A0A6A3XAN9_9STRA (Nitroreductase domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3XAN9_9STRA) HSP 1 Score: 150 bits (378), Expect = 1.040e-38 Identity = 92/245 (37.55%), Postives = 134/245 (54.69%), Query Frame = 2
Query: 293 RRATKRFERRPVPDVVLKKVLGLVLRAPSGFNIQPYECVVVTSDEAKQKLSKAMLGENQQRVLDAGATVVFASDLNSMQNVKKLRTLLEKEGWPKEFIKSFSLYLSVFSTGHSRLFRLPLVVAKRVSFAIAGRLG--KPMPTVAGAETWAFKNTMLAVQASQSRQSSSEELLLAATSCGVASCPMEGFDMRRLRRELGIPLRYSVPIVVSLGYPSKAERDFK-TLRFAPEEVFHRDEFGTTLEGV 1018
R A K F VPD L+++L L LRAP+GFN QPY CV+V + ++KL++AML N ++V +A VFA+D + V +L+ L G P +F+ + ++ +FS G VVA+ + AIA + +P P+ E WA+K A L AA G+A+CPMEGFD R+R L IP RY VP+V++LG+P+ A + K + R P EVF +FG + E +
Sbjct: 44 RYACKAFLPDAVPDKTLQEILKLTLRAPTGFNTQPYACVLVREQKDREKLAEAMLDSNARKVKEAPVVAVFAADCEPSKRVPRLQKLAHDNGAPVDFVSNLPHFVRLFS-GEG-------VVARGLRAAIATAVSPLQPAPSNVSTEAWAYKQATFAAAT----------FLYAAQEYGLATCPMEGFDQIRVRNALDIPDRYGVPVVIALGHPNPAAKPKKPSARLDPTEVFFDGKFGDSSEEI 270
BLAST of mRNA_A-nodosum_M_contig1.154.2 vs. uniprot
Match: A0A4D9D236_9STRA (Nitroreductase domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D236_9STRA) HSP 1 Score: 149 bits (377), Expect = 1.830e-38 Identity = 101/272 (37.13%), Postives = 148/272 (54.41%), Query Frame = 2
Query: 263 AGAFERITLARRATKRF-ERRPVPDVVLKKVLGLVLRAPSGFNIQPYECVVVTSDEAKQKLS-KAMLGENQQRVLDAGATVVFASDLNSMQNVKKLRTLLEKEG-WPKEFIKSFSLYLSVFSTGHS-RLFRLPLVVAKRVSFAIAGRLGKPMPTVAGAETWAFKNTMLAVQASQSRQSSSEELLLAATSCGVASCPMEGFDMRRLRRELGIPLRYSVPIVVSLGYPS----------------KAERDFKTLRFAPEEVFHRDEFGTTLEGV 1018
AG F +I +R + + +PV L ++L L RAPS FNIQP++ VV+ + K++ +AMLG N RV A TVVFA+D+ S + + ++ LL + G +P+ F+ + ++FSTG+ L R L KRV+ + G K +P + ETWA KNTMLA +LAA+S + +CPMEGFD RRLR LG+P RY +P+VVSLGY + +++ +LRF EEV + +G +GV
Sbjct: 22 AGPFSQIVHSRFSNTHYASHKPVHISTLNELLRLTQRAPSSFNIQPFKLVVIRDPTLRDKIAHQAMLGANGNRVRTAPVTVVFAADVESSRLMPQVVALLRQAGTFPEGFLNKIPFFANLFSTGYPFSLLRWCLYWGKRVAMHVVGWF-KAVPRLERPETWAVKNTMLAAMT----------FMLAASSHSLTTCPMEGFDARRLRHLLGLPTRYVLPVVVSLGYAATPGEEAAQGGKEGHAVSSKQPPPSLRFPMEEVVCEEAYGRPWKGV 282
BLAST of mRNA_A-nodosum_M_contig1.154.2 vs. uniprot
Match: W2YM79_PHYPR (Nitroreductase domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=W2YM79_PHYPR) HSP 1 Score: 149 bits (375), Expect = 2.120e-38 Identity = 91/245 (37.14%), Postives = 135/245 (55.10%), Query Frame = 2
Query: 293 RRATKRFERRPVPDVVLKKVLGLVLRAPSGFNIQPYECVVVTSDEAKQKLSKAMLGENQQRVLDAGATVVFASDLNSMQNVKKLRTLLEKEGWPKEFIKSFSLYLSVFSTGHSRLFRLPLVVAKRVSFAIAGRLGK--PMPTVAGAETWAFKNTMLAVQASQSRQSSSEELLLAATSCGVASCPMEGFDMRRLRRELGIPLRYSVPIVVSLGYPSK-AERDFKTLRFAPEEVFHRDEFGTTLEGV 1018
R A K F PVP+ LK++L L RAP+GFN+QPY CV+V + ++KL++AM+ N ++V +A VFA+DL + V +L+ L+ G P +F+ + + +FS G VVA + AIA + P P+ E WAFK T A L AA + G+A+CPMEGFD R+R L IP RY VP+V++LG+ + A+ + + R P E+F +FG + E +
Sbjct: 33 RYACKAFLPTPVPNETLKEILRLTQRAPTGFNVQPYACVLVREQKDREKLAEAMMDSNIRKVKEAPVVAVFAADLEPSKRVPRLQHLMHDNGAPADFVANMPHVVRLFS-GEG-------VVASTLRAAIATAVSPLMPAPSNVSTEAWAFKQTAFAAAT----------FLYAAQTHGLATCPMEGFDQIRVRNALDIPDRYGVPVVIALGHANPDAKPEKPSARLDPTEIFFDGKFGNSSEKI 259 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1.154.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1.154.2 >prot_A-nodosum_M_contig1.154.2 ID=prot_A-nodosum_M_contig1.154.2|Name=mRNA_A-nodosum_M_contig1.154.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=303bp MILSRVWVLLSALGVSCSFEPAVARGLRLAPARPLAKVPKVGVRDSDAGAback to top mRNA from alignment at A-nodosum_M_contig1:2041221..2044743+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig1.154.2 ID=mRNA_A-nodosum_M_contig1.154.2|Name=mRNA_A-nodosum_M_contig1.154.2|organism=Ascophyllum nodosum dioecious|type=mRNA|length=3523bp|location=Sequence derived from alignment at A-nodosum_M_contig1:2041221..2044743+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig1:2041221..2044743+ >mRNA_A-nodosum_M_contig1.154.2 ID=mRNA_A-nodosum_M_contig1.154.2|Name=mRNA_A-nodosum_M_contig1.154.2|organism=Ascophyllum nodosum dioecious|type=CDS|length=909bp|location=Sequence derived from alignment at A-nodosum_M_contig1:2041221..2044743+ (Ascophyllum nodosum dioecious)back to top |