mRNA_A-nodosum_M_contig1.133.1 (mRNA) Ascophyllum nodosum dioecious
|
Overview
Homology
BLAST of mRNA_A-nodosum_M_contig1.133.1 vs. uniprot
Match: D8LU57_ECTSI (UEV domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LU57_ECTSI) HSP 1 Score: 95.5 bits (236), Expect = 1.530e-18 Identity = 46/90 (51.11%), Postives = 63/90 (70.00%), Query Frame = 2
Query: 599 GPGFFFIRAFIPRQRLIEYMIRHIPTLGMEEEDAKADFIRHIEEIKAFVPTE---KRLEFSVKEGWEPLCKFLGVPVPDVPFPRTNSRTE 859
G G FF+ RL ++M+R++ T MEE++AKAD++RH +E+ A V + + LEFSV++GW PLCKFL V VPDVPFP+ NSR E
Sbjct: 298 GWGIFFLEVLKSDVRLYKHMLRYMKTHTMEEDEAKADYVRHNKEVLAHVGADNGRELLEFSVEQGWGPLCKFLDVSVPDVPFPKVNSREE 387
BLAST of mRNA_A-nodosum_M_contig1.133.1 vs. uniprot
Match: A0A4R4XJW2_9ACTN (Sulfotransferase family protein n=2 Tax=unclassified Actinomadura TaxID=2626254 RepID=A0A4R4XJW2_9ACTN) HSP 1 Score: 84.3 bits (207), Expect = 1.150e-15 Identity = 44/104 (42.31%), Postives = 60/104 (57.69%), Query Frame = 2
Query: 632 PRQRLIEYMI-RHIPTLG------------------MEEEDAKAD-FIRHIEEIKAFVPTEKRLEFSVKEGWEPLCKFLGVPVPDVPFPRTNSRTEYNQVVIGR 883
PRQR++ +++ R P L +E+ D D F RH+ E+KA +P + L F V EGWEPLC FLGVPVPD PFPR+N R E+++ + GR
Sbjct: 116 PRQRIVRWLVARRSPDLARLNDLVETTIVDRAFGGRIEDRDHVLDVFHRHVAEVKAAIPDGRLLVFDVAEGWEPLCAFLGVPVPDGPFPRSNDRAEFHRHLSGR 219
BLAST of mRNA_A-nodosum_M_contig1.133.1 vs. uniprot
Match: A0A017HJT8_9RHOB (Uncharacterized protein n=1 Tax=Rubellimicrobium mesophilum DSM 19309 TaxID=442562 RepID=A0A017HJT8_9RHOB) HSP 1 Score: 83.6 bits (205), Expect = 1.780e-15 Identity = 37/63 (58.73%), Postives = 44/63 (69.84%), Query Frame = 2
Query: 680 GMEEEDAKADFIRHIEEIKAFVPTEKRLEFSVKEGWEPLCKFLGVPVPDVPFPRTNSRTEYNQ 868
G++ E +A F H E +KA VP E+ L F V+EGW PLC FLGVPVPD PFPRTN R E+ Q
Sbjct: 138 GLDREGLRAAFAAHTEAVKAAVPAERLLVFEVREGWAPLCAFLGVPVPDEPFPRTNEREEFWQ 200
BLAST of mRNA_A-nodosum_M_contig1.133.1 vs. uniprot
Match: A0A317FJX5_9PROT (Sulfotransferase family protein n=1 Tax=Falsiroseomonas bella TaxID=2184016 RepID=A0A317FJX5_9PROT) HSP 1 Score: 82.8 bits (203), Expect = 3.230e-15 Identity = 38/65 (58.46%), Postives = 46/65 (70.77%), Query Frame = 2
Query: 686 EEEDAKADFIRHIEEIKAFVPTEKRLEFSVKEGWEPLCKFLGVPVPDVPFPRTNSRTEYNQVVIG 880
++E A A F R I E+KA +P E+ L F V EGWEPLC+FLGVPVPD PFPR NS E+ +V G
Sbjct: 145 DKEGALAAFRRRIAEVKAAIPAERLLVFDVAEGWEPLCRFLGVPVPDAPFPRVNSTEEFWPMVRG 209
BLAST of mRNA_A-nodosum_M_contig1.133.1 vs. uniprot
Match: UPI000784F9CE (hypothetical protein n=2 Tax=Herbidospora TaxID=28443 RepID=UPI000784F9CE) HSP 1 Score: 83.2 bits (204), Expect = 3.450e-15 Identity = 39/97 (40.21%), Postives = 55/97 (56.70%), Query Frame = 2
Query: 635 RQRLIEYMIRHIPTLGMEEEDAKAD-------------------FIRHIEEIKAFVPTEKRLEFSVKEGWEPLCKFLGVPVPDVPFPRTNSRTEYNQ 868
R+ L +R +P + + + AKA F RH+EE++A +P ++ L F +EGWEPLC+FLGVPVPDVPFP N RT +N+
Sbjct: 119 RRELHRLALRRVPEMALFPKMAKATVADQVFGGRIGDRAHCVEVFRRHVEEVEAAIPADRLLVFECREGWEPLCRFLGVPVPDVPFPHVNDRTHFNR 215
BLAST of mRNA_A-nodosum_M_contig1.133.1 vs. uniprot
Match: UPI000A7F1CE9 (sulfotransferase family protein n=3 Tax=Herbidospora TaxID=28443 RepID=UPI000A7F1CE9) HSP 1 Score: 83.6 bits (205), Expect = 5.430e-15 Identity = 39/90 (43.33%), Postives = 53/90 (58.89%), Query Frame = 2
Query: 656 MIRHIPTLGMEEEDAKAD-------------------FIRHIEEIKAFVPTEKRLEFSVKEGWEPLCKFLGVPVPDVPFPRTNSRTEYNQ 868
M+R +P + + AKA F+RH EE+KA VP ++ L + +EGWEPLC+FLGVPVPDVPFP N RT++N+
Sbjct: 176 MLRRVPEMALFPRMAKATVADRVFGGRLDDREHCIEVFLRHNEEVKAAVPADRLLVYECREGWEPLCRFLGVPVPDVPFPHVNDRTQFNR 265
BLAST of mRNA_A-nodosum_M_contig1.133.1 vs. uniprot
Match: UPI000A853596 (sulfotransferase family protein n=1 Tax=Herbidospora mongoliensis TaxID=688067 RepID=UPI000A853596) HSP 1 Score: 82.4 bits (202), Expect = 5.920e-15 Identity = 33/53 (62.26%), Postives = 42/53 (79.25%), Query Frame = 2
Query: 710 FIRHIEEIKAFVPTEKRLEFSVKEGWEPLCKFLGVPVPDVPFPRTNSRTEYNQ 868
F RHIEE++A +P E+ L F +EGWEPLC+FLGVPVPDVPFP N R ++N+
Sbjct: 163 FRRHIEEVRATIPAERLLVFECREGWEPLCRFLGVPVPDVPFPHVNDRIDFNR 215
BLAST of mRNA_A-nodosum_M_contig1.133.1 vs. uniprot
Match: UPI001ADFD5B3 (sulfotransferase family protein n=2 Tax=Streptomyces TaxID=1883 RepID=UPI001ADFD5B3) HSP 1 Score: 81.6 bits (200), Expect = 1.070e-14 Identity = 36/67 (53.73%), Postives = 46/67 (68.66%), Query Frame = 2
Query: 671 PTLGMEEEDAKADFIRHIEEIKAFVPTEKRLEFSVKEGWEPLCKFLGVPVPDVPFPRTNSRTEYNQV 871
P ++EE+A A F RH+ +++A VP ++ L F VKEGWEPLC FLGVPVPD FPR N + QV
Sbjct: 143 PLNELDEEEAVAAFERHVADVRASVPQDRLLVFEVKEGWEPLCAFLGVPVPDEEFPRVNEAAGFRQV 209
BLAST of mRNA_A-nodosum_M_contig1.133.1 vs. uniprot
Match: A0A522QUM4_9GAMM (Uncharacterized protein n=1 Tax=Rhodanobacteraceae bacterium TaxID=2052182 RepID=A0A522QUM4_9GAMM) HSP 1 Score: 81.6 bits (200), Expect = 1.510e-14 Identity = 32/61 (52.46%), Postives = 46/61 (75.41%), Query Frame = 2
Query: 698 AKADFIRHIEEIKAFVPTEKRLEFSVKEGWEPLCKFLGVPVPDVPFPRTNSRTEYNQVVIG 880
A AD+ +H+ +++ VP ++ L FSVKEGW+PLC F+GVPVPD PFPR N R ++ Q++ G
Sbjct: 158 AIADYHQHVVDVQTAVPPDRLLVFSVKEGWKPLCDFIGVPVPDTPFPRVNDREQFRQIIKG 218
BLAST of mRNA_A-nodosum_M_contig1.133.1 vs. uniprot
Match: A0A0U2PDY3_9ALTE (Uncharacterized protein n=2 Tax=Lacimicrobium alkaliphilum TaxID=1526571 RepID=A0A0U2PDY3_9ALTE) HSP 1 Score: 80.5 bits (197), Expect = 1.900e-14 Identity = 36/68 (52.94%), Postives = 45/68 (66.18%), Query Frame = 2
Query: 680 GMEEEDAKADFIRHIEEIKAFVPTEKRLEFSVKEGWEPLCKFLGVPVPDVPFPRTNSRTEYNQVVIGR 883
G+E + K FI H E +KA +P + L F VKEGW+PLC FL +PVPD PFPRTN R E+ V G+
Sbjct: 137 GLEHQQLKDAFIAHNEAVKATIPARQLLVFEVKEGWQPLCDFLELPVPDKPFPRTNHRQEFWDRVSGK 204 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1.133.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1.133.1 >prot_A-nodosum_M_contig1.133.1 ID=prot_A-nodosum_M_contig1.133.1|Name=mRNA_A-nodosum_M_contig1.133.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=77bp MIRHIPTLGMEEEDAKADFIRHIEEIKAFVPTEKRLEFSVKEGWEPLCKFback to top mRNA from alignment at A-nodosum_M_contig1:1891944..1893197+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig1.133.1 ID=mRNA_A-nodosum_M_contig1.133.1|Name=mRNA_A-nodosum_M_contig1.133.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=1254bp|location=Sequence derived from alignment at A-nodosum_M_contig1:1891944..1893197+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig1:1891944..1893197+ >mRNA_A-nodosum_M_contig1.133.1 ID=mRNA_A-nodosum_M_contig1.133.1|Name=mRNA_A-nodosum_M_contig1.133.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=231bp|location=Sequence derived from alignment at A-nodosum_M_contig1:1891944..1893197+ (Ascophyllum nodosum dioecious)back to top |