mRNA_A-nodosum_M_contig1.121.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig1.121.1
Unique NamemRNA_A-nodosum_M_contig1.121.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
BLAST of mRNA_A-nodosum_M_contig1.121.1 vs. uniprot
Match: D7FMZ6_ECTSI (NnrU domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMZ6_ECTSI)

HSP 1 Score: 529 bits (1362), Expect = 1.440e-187
Identity = 247/297 (83.16%), Postives = 273/297 (91.92%), Query Frame = 1
Query:    1 RDRDRASKIGPLSVSTSELEKLEDTSGLIGEDAAVFSFADQSLNSWAAFLAVLGTVLAALYYFWINPETGYGDDFVRAIESISGGDSTVTITLILGIFAVAHSGLASVRPKGEELIGARAWRVLFGVVSLPLAVTAVAYFINHRYDGTNLWDIKMVPGVHEACWISSFISFLFLYPSTFNLLEVAAVDKPELHMWETGVMRITRHPQTIGQAIWCAAHLAWVGTSFTAVTSAGLMAHHLFSLWNGDRRLKDKYGDEFEAVRERTSIFPFQAVWEGRQQLPSDYWREFARGPYFFIVG 891
            R+R R S + PL++S SELE L+  SGL+GEDAAVFSF +QSL SW AFLAVLGTVL ALYY W+ PETGYGDDFVR +E +SGGDST+T+TLILG+FAVAHSGLAS+RPKGEELIGARAWRVLFGVVSLPLAVTAVAYFINHRYDG  LW+IKMVPGVH+ACWI+SFISF+FLYPSTFNLLEVAAVDKP+LH+WETGV RITRHPQT GQA+WCAAHLAWVGTSFTAVTSAGLMAHHLFSLWNGDRRLK+KYGD+FEAVRERTS  PFQA++EGRQQLPSDYW+EFARGPYF I G
Sbjct:    4 RERHRGSSVNPLAMSASELEDLQRQSGLVGEDAAVFSFEEQSLKSWGAFLAVLGTVLTALYYLWLKPETGYGDDFVRFLEGLSGGDSTITVTLILGVFAVAHSGLASLRPKGEELIGARAWRVLFGVVSLPLAVTAVAYFINHRYDGVQLWNIKMVPGVHDACWITSFISFVFLYPSTFNLLEVAAVDKPQLHLWETGVTRITRHPQTFGQALWCAAHLAWVGTSFTAVTSAGLMAHHLFSLWNGDRRLKEKYGDDFEAVRERTSAVPFQAIFEGRQQLPSDYWKEFARGPYFIIAG 300          
BLAST of mRNA_A-nodosum_M_contig1.121.1 vs. uniprot
Match: A0A835Z2B9_9STRA (NnrU protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2B9_9STRA)

HSP 1 Score: 484 bits (1245), Expect = 1.640e-169
Identity = 224/313 (71.57%), Postives = 262/313 (83.71%), Query Frame = 1
Query:   13 RASKIGPLSVSTSELEKLEDTSGLIGEDAAVFSFADQSLNSWAAFLAVLGTVLAALYYFWINPETGYGDDFVRAIESISGGDSTVTITLILGIFAVAHSGLASVRPKGEELIGARAWRVLFGVVSLPLAVTAVAYFINHRYDGTNLWDIKMVPGVHEACWISSFISFLFLYPSTFNLLEVAAVDKPELHMWETGVMRITRHPQTIGQAIWCAAHLAWVGTSFTAVTSAGLMAHHLFSLWNGDRRLKDKYGDEFEAVRERTSIFPFQAVWEGRQQLPSDYWREFARGPYFFIVGGTIAAYFAHPFMQAGSYYLH 951
            R S    L +ST ++E+L+D SGLIGEDAA FS  +Q L SW +F  V   V+AAL+Y WIN  TGYGDDF+RA+ES+SGG+S+VTI L+LGIFAVAHSGLAS+RPKGEE+IGARAWRVLFGVVSLPLA++ + YFINHRYDG  LW++K VPGVH+ CWISSFISF FLYPSTFNLLEVAAVDKP+LHMWETGVMRITRHPQ +GQ IWC AH  WVGTSFT +TSA LM HHLF++WNGDRRL DKYG+ FE V+ RTS+ PFQAV EGRQ+LP+DYW+E+ARGPY  I  GT+ AY+ HPFMQAGS+ LH
Sbjct:   52 RRSTSSALQLSTRDIEELQDASGLIGEDAAAFSLQEQKLASWISFGGVFTVVMAALWYLWINESTGYGDDFIRALESVSGGNSSVTIVLLLGIFAVAHSGLASLRPKGEEIIGARAWRVLFGVVSLPLALSCLVYFINHRYDGVALWNLKGVPGVHDFCWISSFISFFFLYPSTFNLLEVAAVDKPQLHMWETGVMRITRHPQFVGQGIWCLAHALWVGTSFTLLTSAMLMGHHLFAVWNGDRRLADKYGEAFEKVKARTSVMPFQAVIEGRQKLPADYWKEWARGPYAIIAAGTVGAYYLHPFMQAGSWTLH 364          
BLAST of mRNA_A-nodosum_M_contig1.121.1 vs. uniprot
Match: A0A7S3YAC1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YAC1_HETAK)

HSP 1 Score: 417 bits (1072), Expect = 4.030e-143
Identity = 190/312 (60.90%), Postives = 237/312 (75.96%), Query Frame = 1
Query:    7 RDRASKIGPLSVSTSELEKLEDTSGLIGEDAAVFSFADQSLNSWAAFLAVLGTVLAALYYFWINPETGYGDDFVRAIESISGGDSTVTITLILGIFAVAHSGLASVRPKGEELIGARAWRVLFGVVSLPLAVTAVAYFINHRYDGTNLWDIKMVPGVHEACWISSFISFLFLYPSTFNLLEVAAVDKPELHMWETGVMRITRHPQTIGQAIWCAAHLAWVGTSFTAVTSAGLMAHHLFSLWNGDRRLKDKYGDEFEAVRERTSIFPFQAVWEGRQQLPSDYWREFARGPYFFIVGGTIAAYFAHPFMQAGSY 942
            R R+S  G L    S   + + T  L+GEDAAVF F++Q + SW  F  ++ +VL  LY  WI  +TG+GDD++R +ESI+GGDS V + ++L IF V HSGLAS+R KGE +IGARAWRVLF + SLPLA++AV YFINHRYDG  LW ++  PG+H  CW  SF+SFLFLYPSTFNLLEVAAVD+PE H+WETGV R+TRHPQ +GQ +WC AH  WVGTSF  V +AGLMAHHLF+ W+GDRRL++++GD F  V+ERTSI PFQA+ EGRQQLP DY++EF RGPY  +   T+ AYFAHP+MQA SY
Sbjct:   56 RTRSSSSGLLRFEKSLPAQADPTQELVGEDAAVFEFSNQKIQSWGIFSVLVTSVLGLLYVTWIKADTGFGDDYIRLLESIAGGDSHVVMGMLLTIFGVVHSGLASLRTKGESIIGARAWRVLFALASLPLALSAVVYFINHRYDGALLWSLRDFPGMHGLCWALSFVSFLFLYPSTFNLLEVAAVDRPEQHLWETGVARVTRHPQAVGQGLWCLAHTLWVGTSFMCVATAGLMAHHLFACWHGDRRLEERHGDAFRRVKERTSIMPFQAILEGRQQLPQDYYKEFLRGPYLIVTVATVGAYFAHPYMQAYSY 367          
BLAST of mRNA_A-nodosum_M_contig1.121.1 vs. uniprot
Match: A0A7S4G126_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4G126_9EUGL)

HSP 1 Score: 420 bits (1080), Expect = 6.110e-143
Identity = 201/318 (63.21%), Postives = 237/318 (74.53%), Query Frame = 1
Query:   25 IGPLSVSTSELEKLEDTSG---------LIGEDAAVFSFADQSLNSWAAFLAVLGTVLAALYYFWINPETGYGDDFVRAIESISGGDSTVTITLILGIFAVAHSGLASVRPKGEELIGARAWRVLFGVVSLPLAVTAVAYFINHRYDGTNLWDIKMVPGVHEACWISSFISFLFLYPSTFNLLEVAAVDKPELHMWETGVMRITRHPQTIGQAIWCAAHLAWVGTSFTAVTSAGLMAHHLFSLWNGDRRLKDKYGDEFEAVRERTSIFPFQAVWEGRQQLPSDYWREFARGPYFFIVGGTIAAYFAHPFMQAGSYYLH 951
            +G L VS      L  TSG           GEDAA F+ +DQ    W  F+AVL TVL  L+  WI P TG  D+FV A+E + GG++  T+ LIL IF +AHSGLA +RPKGE +IG RA+RVLFG+VSLPLA+ A+ YFINHRYDGT LWDIK VPGVH A WI +FISF+FLYPSTFNLLE+AAV+KP+LHMWETG+MRITRHPQ +GQ +WC AH AW+G+SF  VTS GLMAHH F +W+GDRRL  KYG+ FE V+ RTSI+PF A+ +GRQQLP DYW EFARGPY  IV GT+ AYFAHP MQ GSY LH
Sbjct:  148 MGLLGVSRRSSLSLASTSGEPGASPYRTSRGEDAAAFTLSDQRTEDWVKFVAVLVTVLGGLFVVWIYPPTGLADEFVDALEGLMGGNTEATMMLILVIFGIAHSGLAGLRPKGEAIIGERAYRVLFGLVSLPLAILALVYFINHRYDGTLLWDIKGVPGVHSAVWILTFISFIFLYPSTFNLLEIAAVEKPKLHMWETGIMRITRHPQFVGQGLWCIAHTAWIGSSFAVVTSIGLMAHHTFGVWHGDRRLFAKYGEAFEEVKARTSIWPFAAILDGRQQLPKDYWLEFARGPYLAIVVGTVGAYFAHPLMQLGSYSLH 465          
BLAST of mRNA_A-nodosum_M_contig1.121.1 vs. uniprot
Match: A0A8J4AM61_9CHLO (NnrU domain-containing protein n=2 Tax=Volvox TaxID=3066 RepID=A0A8J4AM61_9CHLO)

HSP 1 Score: 414 bits (1063), Expect = 6.880e-142
Identity = 192/289 (66.44%), Postives = 230/289 (79.58%), Query Frame = 1
Query:   82 LIGEDAAVFSFADQSLNSWAAFLAVLGTVLAALYYFWINPETGYGDDFVRAIESISGGDSTVTITLILGIFAVAHSGLASVRPKGEELIGARAWRVLFGVVSLPLAVTAVAYFINHRYDGTNLWDIKMVPGVHEACWISSFISFLFLYPSTFNLLEVAAVDKPELHMWETGVMRITRHPQTIGQAIWCAAHLAWVGTSFTAVTSAGLMAHHLFSLWNGDRRLKDKYGDEFEAVRERTSIFPFQAVWEGRQQLPSDYWREFARGPYFFIVGGTIAAYFAHPFMQAGSYYL 948
            +IGEDAAVF    Q++ SWA F  +L TVL ALY  WI P  G  DD++ AI+SI+G  S +TITLIL  FA+AHSGLA +RP GEE+IGARA+RV+F +VSLPLA+ A+ YFINHRYDG  LWD++ VPGVHE  W+ +FISF FLYPSTFN+LEVAAVDKP+LH+WETG+MRITRHPQ +GQAIWCAAH  W+G+SF  VTSA LMAHHLF  W+GDRRLK KYGD FEAV+ RTS+ PF A+ +GRQ+LP+DYW+EFAR PYF +   TI AY AHP MQA S+ L
Sbjct:   73 MIGEDAAVFDIEKQNIKSWALFTVLLSTVLGALYLVWIQPGVGLADDYLAAIQSIAGS-SEITITLILLFFAIAHSGLAGLRPYGEEVIGARAYRVIFALVSLPLAIVAIVYFINHRYDGVPLWDVRGVPGVHELVWVLNFISFWFLYPSTFNILEVAAVDKPKLHLWETGIMRITRHPQMVGQAIWCAAHTMWIGSSFMVVTSACLMAHHLFGCWHGDRRLKAKYGDAFEAVKARTSVVPFAAILDGRQKLPADYWKEFARMPYFTVTALTIGAYLAHPLMQAASFSL 360          
BLAST of mRNA_A-nodosum_M_contig1.121.1 vs. uniprot
Match: A0A7S3VSM6_DUNTE (Hypothetical protein n=2 Tax=Dunaliella TaxID=3044 RepID=A0A7S3VSM6_DUNTE)

HSP 1 Score: 404 bits (1039), Expect = 5.260e-138
Identity = 183/290 (63.10%), Postives = 220/290 (75.86%), Query Frame = 1
Query:   79 GLIGEDAAVFSFADQSLNSWAAFLAVLGTVLAALYYFWINPETGYGDDFVRAIESISGGDSTVTITLILGIFAVAHSGLASVRPKGEELIGARAWRVLFGVVSLPLAVTAVAYFINHRYDGTNLWDIKMVPGVHEACWISSFISFLFLYPSTFNLLEVAAVDKPELHMWETGVMRITRHPQTIGQAIWCAAHLAWVGTSFTAVTSAGLMAHHLFSLWNGDRRLKDKYGDEFEAVRERTSIFPFQAVWEGRQQLPSDYWREFARGPYFFIVGGTIAAYFAHPFMQAGSYYL 948
            GL+GEDAA F  + QS  SWA F  +L  VL  +Y  WI P  G  DDF+  +E  S  +   TI LIL +FAV HSGLA +RPKGE+LIGARA+RV+F +VSLPLA+ A+ YFINHRYDG  LWD++ V GVHE  W+ +F+SF FLYPSTFN+LEVAAVD+P+LHMWETG+MRITRHPQ +GQ IWCAAH  W+G SF  VTSAGLMAHHLF  W+GDRRL  KYG+ FE V+ RTS FP QA+WEGRQ LP+DY++EF R PYF +   T+ AYFAHP MQ+ S+YL
Sbjct:   87 GLVGEDAAAFDVSQQSTKSWALFTGLLTGVLGLIYLVWIQPGAGLADDFLGLVEGFSNNNPEATILLILFVFAVVHSGLAGLRPKGEQLIGARAYRVIFALVSLPLAIVAIVYFINHRYDGMPLWDLRGVTGVHELVWLLNFVSFYFLYPSTFNILEVAAVDEPKLHMWETGIMRITRHPQMVGQLIWCAAHTLWIGNSFMLVTSAGLMAHHLFGCWHGDRRLSAKYGEAFEIVKARTSTFPLQAIWEGRQVLPADYYKEFLRAPYFAVTAFTLGAYFAHPIMQSASFYL 376          
BLAST of mRNA_A-nodosum_M_contig1.121.1 vs. uniprot
Match: A0A2K1L979_PHYPA (NnrU domain-containing protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1L979_PHYPA)

HSP 1 Score: 402 bits (1032), Expect = 1.010e-136
Identity = 190/313 (60.70%), Postives = 232/313 (74.12%), Query Frame = 1
Query:   31 PLSVSTSELEKLEDTSG------LIGEDAAVFSFADQSLNSWAAFLAVLGTVLAALYYFWINPETGYGDDFVRAIESISGGDSTVTITLILGIFAVAHSGLASVRPKGEELIGARAWRVLFGVVSLPLAVTAVAYFINHRYDGTNLWDIKMVPGVHEACWISSFISFLFLYPSTFNLLEVAAVDKPELHMWETGVMRITRHPQTIGQAIWCAAHLAWVGTSFTAVTSAGLMAHHLFSLWNGDRRLKDKYGDEFEAVRERTSIFPFQAVWEGRQQLPSDYWREFARGPYFFIVGGTIAAYFAHPFMQAGSYYLH 951
            P+ V+ S LE+  D  G      L+GEDAAVF+   Q   SW  F  VLGTVLA LYY W++P TGYG  F+ A+ S+S     V +  IL +FA+ HSGLA +R  GE+L+G RA+RV F  +SLPLAV+AV YFINHRYDG  LW ++ +PGVHEA W  SFISF FLYPSTFNLLEVAAVDKP++HMWETG+MRITRHPQ +GQ IWC AH  W+G+SFT  TS GL+AHHLF +W+GDRRL  KYG+ FE V+ERTSI PF A+ +GRQ+LP DY++EF R PY+ IVG T+ AYF+HP MQ GS+ LH
Sbjct:   82 PIFVN-SVLERPPDFEGDIEQPVLVGEDAAVFNVKSQKATSWIYFFLVLGTVLAILYYIWLDPNTGYGGAFIDALSSLSSNHEIVMLA-ILAVFALVHSGLAGLRASGEKLVGERAYRVFFAGISLPLAVSAVVYFINHRYDGVQLWQVRTIPGVHEAVWALSFISFFFLYPSTFNLLEVAAVDKPKVHMWETGIMRITRHPQMVGQFIWCLAHTLWIGSSFTLTTSFGLLAHHLFGVWHGDRRLSAKYGEAFERVKERTSIIPFAAILDGRQKLPEDYYKEFLRVPYYVIVGFTLGAYFSHPLMQLGSHILH 392          
BLAST of mRNA_A-nodosum_M_contig1.121.1 vs. uniprot
Match: A0A250WR75_9CHLO (NnrU domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WR75_9CHLO)

HSP 1 Score: 397 bits (1021), Expect = 1.480e-135
Identity = 185/302 (61.26%), Postives = 227/302 (75.17%), Query Frame = 1
Query:   43 STSELEKLEDTSGLIGEDAAVFSFADQSLNSWAAFLAVLGTVLAALYYFWINPETGYGDDFVRAIESISGGDSTVTITLILGIFAVAHSGLASVRPKGEELIGARAWRVLFGVVSLPLAVTAVAYFINHRYDGTNLWDIKMVPGVHEACWISSFISFLFLYPSTFNLLEVAAVDKPELHMWETGVMRITRHPQTIGQAIWCAAHLAWVGTSFTAVTSAGLMAHHLFSLWNGDRRLKDKYGDEFEAVRERTSIFPFQAVWEGRQQLPSDYWREFARGPYFFIVGGTIAAYFAHPFMQAGSYYL 948
            + SE  + + T+ L+GEDAA F    QSL SW  F  +L  VL  LY  WI P TG  DD+V+ I+++S  +   TITLIL +FA+ HSGLA +RP+ E+LIGARA+RV+F + SLPLA  A+ YFINHRYDGT LWD++ V G+HE  W  +FISF FLYPSTFN+LEVAAVD+P+LHMWETG+MRITRHPQ +GQA+WC AH  W+G SFT VTS GLMAHHLF  W+GDRRL  KYG+ FE+V+ RTSI PFQA+WEGRQQLP+DY++EF R PY  +   T+ AY AHP MQ  SYYL
Sbjct:   56 AASEEPQNQLTTSLVGEDAAAFDVQRQSLKSWGLFFGLLTGVLGLLYLVWIQPGTGLADDYVQTIKTLSNDNPEGTITLILLVFAIFHSGLAGLRPQAEKLIGARAYRVIFALGSLPLATVALVYFINHRYDGTPLWDLRGVSGIHELVWTLNFISFYFLYPSTFNILEVAAVDEPKLHMWETGIMRITRHPQMVGQAMWCLAHTLWIGNSFTVVTSLGLMAHHLFGCWHGDRRLSSKYGEAFESVKARTSIAPFQAIWEGRQQLPADYYKEFLRVPYAAVTIFTLGAYLAHPIMQGASYYL 357          
BLAST of mRNA_A-nodosum_M_contig1.121.1 vs. uniprot
Match: A0A835XZY9_9CHLO (NnrU domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835XZY9_9CHLO)

HSP 1 Score: 397 bits (1020), Expect = 2.180e-135
Identity = 184/315 (58.41%), Postives = 236/315 (74.92%), Query Frame = 1
Query:    7 RDRASKIGPLSVSTSELEKLEDTSGLIGEDAAVFSFADQSLNSWAAFLAVLGTVLAALYYFWINPETGYGDDFVRAIESISGGDSTVTITLILGIFAVAHSGLASVRPKGEELIGARAWRVLFGVVSLPLAVTAVAYFINHRYDGTNLWDIKMVPGVHEACWISSFISFLFLYPSTFNLLEVAAVDKPELHMWETGVMRITRHPQTIGQAIWCAAHLAWVGTSFTAVTSAGLMAHHLFSLWNGDRRLKDKYGDEFEAVRERTSIFPFQAVWEGRQQLPSDYWREFARGPYFFIVGGTIAAYFAHPFMQAGSYYLH 951
            R  +S++   + S ++      T+ L+GED+A F  + QSL SW  F  +L TVL ALY  WI P  G+ DD++ A+ES + G+   T+ LIL +FA+AHSGLA +RP GE++IGARA+RV+F +VSLPLA+ ++ YFINHRYDG  LWD++ VPGVH   WI +FISF FLYPSTFN+LEVAAVD+P+LH+WETG+MRITRHPQ +GQ +WCAAH  WVG+S   V SAGLMAHHLF  W+GDRRLK KYGD FEAV+ RTS+ PF A+ +GRQQLP+DYW+EF R PY  I   T+ AY+AHP MQ+ ++ LH
Sbjct:   46 RPTSSRVVARASSETDASTSASTAPLVGEDSAAFDLSKQSLQSWGLFTVLLSTVLGALYLVWIQP-AGFADDYLAALESWTSGNPEATMALILLVFAIAHSGLAGLRPYGEKVIGARAYRVIFALVSLPLALVSIVYFINHRYDGVALWDVRDVPGVHSLVWIVNFISFYFLYPSTFNILEVAAVDEPKLHLWETGIMRITRHPQMVGQGLWCAAHTLWVGSSVMLVASAGLMAHHLFGCWHGDRRLKAKYGDAFEAVKARTSVLPFAAIADGRQQLPADYWKEFLRMPYVAITILTLGAYWAHPIMQSAAFNLH 359          
BLAST of mRNA_A-nodosum_M_contig1.121.1 vs. uniprot
Match: A0A0G4ECX7_VITBC (NnrU domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4ECX7_VITBC)

HSP 1 Score: 397 bits (1019), Expect = 3.420e-135
Identity = 184/313 (58.79%), Postives = 233/313 (74.44%), Query Frame = 1
Query:    4 DRDRASKIGPLSVSTSELEKLEDTSGLIGEDAAVFSFADQSLNSWAAFLAVLGTVLAALYYFWINPETGYGDDFVRAIESISGGDSTVTITLILGIFAVAHSGLASVRPKGEELIGARAWRVLFGVVSLPLAVTAVAYFINHRYDGTNLWDIKMVPGVHEACWISSFISFLFLYPSTFNLLEVAAVDKPELHMWETGVMRITRHPQTIGQAIWCAAHLAWVGTSFTAVTSAGLMAHHLFSLWNGDRRLKDKYGDEFEAVRERTSIFPFQAVWEGRQQLPSDYWREFARGPYFFIVGGTIAAYFAHPFMQAGSY 942
            +R R     P+    +  ++  D  G +GEDAA F   +QSL SW  F  +L TVL ALY  WI+PETG+G D++R +ES S     V +T ++GIFAVAHSGLAS+RP+ E +IGARAWRV+F ++SLPLA +A+AYFINHRYDG  LWD++ VPGVHE  W  S +SF FLYPSTFNLLEVAAVDKP+LH+WE+GVMRITRHPQ +GQ +WC AH  W+G SFT  TS  LMAHHLF +W+GD+RL+ KYG+ F+ V+ RTS+ PF AV +GRQ+LP DYW+EF R PY  ++  T+ AY+AHPFMQA S+
Sbjct:   46 ERPRHHVFQPVRFEATREDRAADAVGFVGEDAARFDLEEQSLKSWGIFSVLLVTVLGALYVSWISPETGFGKDYLRLLESTSDSPEVV-MTELMGIFAVAHSGLASLRPRMEGIIGARAWRVVFALMSLPLAFSAIAYFINHRYDGVQLWDLRNVPGVHEVVWGLSLVSFFFLYPSTFNLLEVAAVDKPQLHLWESGVMRITRHPQMVGQGLWCLAHTLWIGNSFTLWTSVLLMAHHLFGVWHGDQRLRAKYGEAFDQVQRRTSVVPFAAVIDGRQRLPDDYWKEFVRLPYAVVLAATLGAYWAHPFMQAYSW 357          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1.121.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMZ6_ECTSI1.440e-18783.16NnrU domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A835Z2B9_9STRA1.640e-16971.57NnrU protein-domain-containing protein n=1 Tax=Tri... [more]
A0A7S3YAC1_HETAK4.030e-14360.90Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S4G126_9EUGL6.110e-14363.21Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A8J4AM61_9CHLO6.880e-14266.44NnrU domain-containing protein n=2 Tax=Volvox TaxI... [more]
A0A7S3VSM6_DUNTE5.260e-13863.10Hypothetical protein n=2 Tax=Dunaliella TaxID=3044... [more]
A0A2K1L979_PHYPA1.010e-13660.70NnrU domain-containing protein n=2 Tax=Physcomitri... [more]
A0A250WR75_9CHLO1.480e-13561.26NnrU domain-containing protein n=1 Tax=Chlamydomon... [more]
A0A835XZY9_9CHLO2.180e-13558.41NnrU domain-containing protein n=1 Tax=Edaphochlam... [more]
A0A0G4ECX7_VITBC3.420e-13558.79NnrU domain-containing protein n=2 Tax=Vitrella br... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1contigA-nodosum_M_contig1:1805524..1809727 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D7FMZ6
PFAMsNnrU
Model size957
Max annot lvl2759|Eukaryota
KEGG rclassRC02636
KEGG koko:K15744
KEGG ReactionR09655
KEGG Pathwayko00906,ko01100,ko01110,map00906,map01100,map01110
KEGG ModuleM00097
Hectar predicted targeting categorysignal anchor
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009507,GO:0009536,GO:0009987,GO:0016119,GO:0016120,GO:0016853,GO:0016859,GO:0042214,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046246,GO:0071704,GO:0090471,GO:1901576
Exons9
Evalue2.35e-188
EggNOG OGsCOG4094@1|root,2QSJ3@2759|Eukaryota
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-25_002890.1
EC5.2.1.12
Description9,15,9'-tri-cis-zeta-carotene isomerase activity
Cds size957
COG categoryS
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1.121.1prot_A-nodosum_M_contig1.121.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig1 1805524..1809727 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866344.1061454-CDS-A-nodosum_M_contig1:1805523..18057371680866344.1061454-CDS-A-nodosum_M_contig1:1805523..1805737Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1 1805524..1805737 +
1680866344.120715-CDS-A-nodosum_M_contig1:1806542..18066611680866344.120715-CDS-A-nodosum_M_contig1:1806542..1806661Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1 1806543..1806661 +
1680866344.1323054-CDS-A-nodosum_M_contig1:1807239..18073681680866344.1323054-CDS-A-nodosum_M_contig1:1807239..1807368Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1 1807240..1807368 +
1680866344.1410706-CDS-A-nodosum_M_contig1:1807599..18076861680866344.1410706-CDS-A-nodosum_M_contig1:1807599..1807686Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1 1807600..1807686 +
1680866344.15028-CDS-A-nodosum_M_contig1:1807946..18080081680866344.15028-CDS-A-nodosum_M_contig1:1807946..1808008Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1 1807947..1808008 +
1680866344.1585858-CDS-A-nodosum_M_contig1:1808259..18083971680866344.1585858-CDS-A-nodosum_M_contig1:1808259..1808397Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1 1808260..1808397 +
1680866344.168558-CDS-A-nodosum_M_contig1:1808849..18089101680866344.168558-CDS-A-nodosum_M_contig1:1808849..1808910Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1 1808850..1808910 +
1680866344.1798077-CDS-A-nodosum_M_contig1:1809262..18093411680866344.1798077-CDS-A-nodosum_M_contig1:1809262..1809341Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1 1809263..1809341 +
1680866344.1897879-CDS-A-nodosum_M_contig1:1809659..18097271680866344.1897879-CDS-A-nodosum_M_contig1:1809659..1809727Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1 1809660..1809727 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig1.121.1

>prot_A-nodosum_M_contig1.121.1 ID=prot_A-nodosum_M_contig1.121.1|Name=mRNA_A-nodosum_M_contig1.121.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=319bp
RDRDRASKIGPLSVSTSELEKLEDTSGLIGEDAAVFSFADQSLNSWAAFL
AVLGTVLAALYYFWINPETGYGDDFVRAIESISGGDSTVTITLILGIFAV
AHSGLASVRPKGEELIGARAWRVLFGVVSLPLAVTAVAYFINHRYDGTNL
WDIKMVPGVHEACWISSFISFLFLYPSTFNLLEVAAVDKPELHMWETGVM
RITRHPQTIGQAIWCAAHLAWVGTSFTAVTSAGLMAHHLFSLWNGDRRLK
DKYGDEFEAVRERTSIFPFQAVWEGRQQLPSDYWREFARGPYFFIVGGTI
AAYFAHPFMQAGSYYLHI*
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mRNA from alignment at A-nodosum_M_contig1:1805524..1809727+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig1.121.1 ID=mRNA_A-nodosum_M_contig1.121.1|Name=mRNA_A-nodosum_M_contig1.121.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=4204bp|location=Sequence derived from alignment at A-nodosum_M_contig1:1805524..1809727+ (Ascophyllum nodosum dioecious)
AGAGACAGAGACAGAGCGTCAAAGATTGGACCGCTTTCTGTATCAACTTC AGAGCTAGAGAAATTAGAAGACACATCTGGATTGATTGGGGAGGACGCAG CCGTGTTTTCCTTCGCGGACCAGAGCCTCAACAGTTGGGCTGCATTTCTT GCTGTGCTTGGCACTGTGCTGGCCGCTTTATACTACTTTTGGATCAACCC GGAGACAGGCTACGGTGAGAAGGAAGTTGATTTTACCCAAGGCCGTATAT TAATATAATAGTACCAGACGGAACGGTAGCCTGCCTCGAATCCAGGCGGG AGACTCGATCGTCGAGGGCAAACGAACGAAACATAAAGCGGGAGAGGACA CCGAGAACGAAGCCGCTCTATAGTAGGCCCCTGCGGTGAACGGCGTGGGT ACGCATTTCTCCTCCCATATATGTATGTATGTTTGCATGATCATCACAAA TAGCAAGAGTATGGACCAACCGGGTAAAGTTGCCAATCCTGCTCGTGGTC AGCTGAACAGGGAAAATTGATATTTCCCTGTCCCCGTTCGCGCCTAAGAA TTTGGTCTCGCGAGACGGGTTAGGCAGTCCCGTCCCGCGTCAGCCTGCTC ATCTCCATACTCAGGCTGAATCTGGTGCTTACTTACGGGATTCCTCCCGA TTCCACAGCGGCGTCCATATTTTTATTTAAACCGCCATACGCCGTCGGGT CAGTCCCGAGTTTATCGGGTCACACAATTGCGTACCGATGGCGTTCACTG CCGAGAGTCCGCCGGCGCCGGGCTAGTAAACCTCAAGGTAGTTCCGAACG GGTGCTGCCTTGGCAGGTCACCATGGACCAATTGCGCCTCTGTTATGTGC GATCGGTTAGCTACGTTTGAATAAATGCAGGCATATTCGAACTATTTGTC TGTGCGTTCGTCGGACGACATTCGCGGATGCACATTGGTCGACGTCTGCA TGTGGACTGTTTGTCGCATTTTTCATCTGTATTTCAATTGTTCATGGTCA TGGTCATGGTGACCGGCAGGTGACGACTTCGTGCGCGCTATTGAAAGTAT CTCCGGTGGTGACTCGACGGTTACCATCACTCTCATACTCGGGATATTCG CTGTCGCTCATAGCGGTTTGGCCAGCGTGCGGCCGAAGGTGTGGCTTTCA TCGAAGCAATTATGGACACGTTCGCTACAAGTCATTGTGTCTAGGTTGTC CAGAGCTGGCCTCGGGGCGGTAGGTTCTGCAGTAGGGCTGGATAGCTTTT CCGCGAACCGTAGAGGGTTCTATCGCGCTAGGGGACAAGTTTATTCATCT TGAAAACCTTTTATCATGTATGAGTCGAGGAACGACCGATACGTCTCTGT TGATCATTTACGGTGCAAGAAAGAAGATCTATCGAGTCCGCGATAAGTTA GGGCGGGGAGGAGGGCTGACTGCAACCTATTTCCTACCGGAGTTACGACT ACGGCGGCCGTATTGCAGGGCAGGGCTATCCTTGTTCTATTAGAGTTTAG CGGCAGTATTAGAACAGCCTCTGCTAGTAGTATTAATTATACCTTGCATC GATTTGGTGCATTACTTCGGCCTGCTGGCGGAGCACACTTTTTTATTCGT TTTCATTAACTCTACATACAGGAGTCGATGTACCGCAGGGTTGAACCCGC CCTGGCCAATTTTCTGCTCTAAGCATGACACCTGTCCGGTTACGAACCCT ACACTCGATGCTCCAGGGTGAGGAATTGATCGGCGCACGCGCATGGAGGG TACTGTTCGGGGTCGTGTCTCTGCCCCTGGCTGTCACGGCAGTTGCATAC TTTATCAATCATCGCTATGATGGTACAAACTTATGGGATATCAAGGTAAA TGATGTTGAGGGACTACGTCGTCAACCTTGGGGATGATAATCGTGCCACC GAGTCAATACTTTAGGCGGGGAATGGACGTAGCCTCGATACGAGTGTGTC TTCGACCGACGGCAGTGCTCGTCACGCCTTCGCAGGTTGTGCACCTGAGA ACTTGTGGCGCGCAGGTTTTCCTCTCGCACTTTTCTGTTCACGTTTTGGT TTGAATGCTTATGCTCTTCTCCTCAGATGGTCCCTGGTGTCCATGAGGCG TGCTGGATCTCTTCTTTCATCTCTTTCTTATTCCTCTACCCAAGCACCTT CAATCTTCTCGAGGTGATGTCATATCTGCAAACGTTTTCCGCGTATCGTA GAGAGTCTCCATGCTCTACAAGTAGAATCGCATCCTCAGCATCCTCAGTT GGGAGGCTTTTCGTATTATGAATGTCACTCGTTACACATGAAGTCATAAT CTGGAACTACTCCGTACCATCGTTCCCTGACATTCCTATTAGAGTAAAAC ATTTCTCTCTCATCGGATAGGGAAATCCAATGCCCGCATGATGTCCCTTA AAATTGTGGATGTTGGGGATCAGGTTGCAGCGGTCGACAAGCCTGAGCTA CACATGTGGGAAACAGGAGTCATGCGTATCACGAGGTAAACCAATATTCA ACGTGTCGTACCTAGGTATTAGCAACCCTATTGAAGAGAAGCTTCAAAGG CTTTTTCCTAGCACGCATCAAATTCTTGATCCTCGACAGCGCTTACAGCA ACCTAGACCTAAATGGTTTGAGCACCAAGGTGCTCTCTGACGAACCGTGT CACCGCAAGTGGACAACTTTGAGTACTATTTCCCTCAAGCACATGAAAAG ATTCCCAAGATATCCACTGGATGTGTGCTGCTCCAGGCACCCGCAAACCA TCGGGCAAGCAATATGGTGCGCTGCGCATCTCGCGTGGGTCGGTACGTCT TTCACGGCCGTAACTTCAGCCGGACTCATGGCGCATCATTTATTCTCCTT GTGGAATGGAGATCGTCGTCTAAAGTGAGAAGAAAGTCTACTGAAAGTTC TGTAATGCTTCTTCAGATGGGGGCAATCTCTTCTTTATAATATAATTTGT AATCGGACGGCGACTGTTAGGGGTGTTTGGTGTTTGAGCCCAAGCGTGCG ATTAACAGGTGCGAGGAAGTGAACGTACAAGAAAGTTTTAAGAATCGATT CTGCGGAAATATAACATGAGTAACACGAGATCCAAAACTAGCGAGAGGCT TCGGATTCCTCGCGAGAAAAAAAATGAGTCGGAATTTGCCCACCTCCCAG TACCAGTCAGCAGGTCTACGTGGTCGACCTCCGACTACAGTGAACTAAGG CCAACAGGACCTGTGCTGGATGAACACTACCGAGACGTACTTATCTAGGC TTGTTTTATTTTCCAAGATACAGTACATTCTTGTGAATGCTGAGTCATCT TCTGTGCCGTGATCGGTTGCCCTCAGAGACAAATACGGTGACGAGTTTGA GGCCGTGCGAGAGCGCACGAGTATCTTCCCGTTCCAGGTGAGAAGCAATC GCGCCATCAGATACAAGGAGCATTCCCAGTCGCGAAGGTTGCGTGAATTC GCTTTCACATTCACGGACGAACGAAAGGAGCACTTACGGACCGACCCATG TCATCCGAGGAGTATGTACTATTAATATTACCATCACTATTAATACTAAA TATAGAAAGTCACTCCAACGTTGGACTCTTGAGGCAGTGGCCGGCTGATG ATGATGCACTCGCTCACGAGAATGCCGGACGTGTGTTGCAGACGTGACGC GCCCTATGCCCCGATCTGATATACAAATAGCTCTTTTTGTTGTTGCGTCT GTTTGAGGCTGATTCTTGTACGTGCGTGCGTCATGAAAGGCTGTGTGGGA AGGCCGGCAGCAGTTACCGAGCGATTACTGGAGAGAGTTCGCAAGAGGGC CGTACTTTTTTATAGTCGGTGAGTAGCAGCACCGAGGCATTTTCCGGTTC CGTTTCCATGTACTTCCGACTATACTAATATTAATAATAGCTATTAATAG TTCCGTCTGCACCGTGCAACAAGGAATTCAAACGTCGTTCACGGATATTT TACTCAATATCAATATCAATCCTCATGCCCTTGCATTTTTCGTCTCTTTT ACGGAGTATGTTTTTTCTTCAAAACACGGGGCTCGCAAACGCATTGTTTC CGGTGTACCGCGCTCCGTTGCGATTTGTCCAACCGTTATATCGTTACCGT TATATACCGTTACCATTATACCGTTATACTGTACAGGTGGTACGATTGCG GCGTACTTCGCGCACCCGTTTATGCAGGCGGGTAGCTACTATTTACACAT TTGA
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Coding sequence (CDS) from alignment at A-nodosum_M_contig1:1805524..1809727+

>mRNA_A-nodosum_M_contig1.121.1 ID=mRNA_A-nodosum_M_contig1.121.1|Name=mRNA_A-nodosum_M_contig1.121.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=957bp|location=Sequence derived from alignment at A-nodosum_M_contig1:1805524..1809727+ (Ascophyllum nodosum dioecious)
AGAGACAGAGACAGAGCGTCAAAGATTGGACCGCTTTCTGTATCAACTTC
AGAGCTAGAGAAATTAGAAGACACATCTGGATTGATTGGGGAGGACGCAG
CCGTGTTTTCCTTCGCGGACCAGAGCCTCAACAGTTGGGCTGCATTTCTT
GCTGTGCTTGGCACTGTGCTGGCCGCTTTATACTACTTTTGGATCAACCC
GGAGACAGGCTACGGTGACGACTTCGTGCGCGCTATTGAAAGTATCTCCG
GTGGTGACTCGACGGTTACCATCACTCTCATACTCGGGATATTCGCTGTC
GCTCATAGCGGTTTGGCCAGCGTGCGGCCGAAGGGTGAGGAATTGATCGG
CGCACGCGCATGGAGGGTACTGTTCGGGGTCGTGTCTCTGCCCCTGGCTG
TCACGGCAGTTGCATACTTTATCAATCATCGCTATGATGGTACAAACTTA
TGGGATATCAAGATGGTCCCTGGTGTCCATGAGGCGTGCTGGATCTCTTC
TTTCATCTCTTTCTTATTCCTCTACCCAAGCACCTTCAATCTTCTCGAGG
TTGCAGCGGTCGACAAGCCTGAGCTACACATGTGGGAAACAGGAGTCATG
CGTATCACGAGGCACCCGCAAACCATCGGGCAAGCAATATGGTGCGCTGC
GCATCTCGCGTGGGTCGGTACGTCTTTCACGGCCGTAACTTCAGCCGGAC
TCATGGCGCATCATTTATTCTCCTTGTGGAATGGAGATCGTCGTCTAAAA
GACAAATACGGTGACGAGTTTGAGGCCGTGCGAGAGCGCACGAGTATCTT
CCCGTTCCAGGCTGTGTGGGAAGGCCGGCAGCAGTTACCGAGCGATTACT
GGAGAGAGTTCGCAAGAGGGCCGTACTTTTTTATAGTCGGTGGTACGATT
GCGGCGTACTTCGCGCACCCGTTTATGCAGGCGGGTAGCTACTATTTACA
CATTTGA
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