mRNA_A-nodosum_M_contig1.118.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig1.118.1
Unique NamemRNA_A-nodosum_M_contig1.118.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
BLAST of mRNA_A-nodosum_M_contig1.118.1 vs. uniprot
Match: A0A6H5KWV2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWV2_9PHAE)

HSP 1 Score: 256 bits (654), Expect = 6.630e-77
Identity = 133/238 (55.88%), Postives = 163/238 (68.49%), Query Frame = 1
Query:  169 LSEEGKKKRVDWALCWVRDGHGGARAFDAMDNVVMVDEKCFFFLKNGQRYYLCEGEDVPVEKVQHKSHIKKLMFLAVVGRPRRDTVNNRNFDGKIGIFPFTRRAPAQRNSRNRAAGTMVTHMVEVTKAVYKEKMLVEVFPAIKAAWPGAPGDVFVQQDNAPSHNIVDDPDIVAAGTADGWNIRLINQPPNSPDTNILDLGFFNSIQSLQDRTTLNTVDELIKEVGRVFAAQDVAVLGR 882
            + ++  K  + WAL WVR   G A  F    + + +DEK F+  K GQRYY  EGE +P+ KVQHKSH+ K+MFLA V RPR D+  +R FDGKIGI+PFT +  AQRN RN AAGTMVTH VEV + +YK K+   VFP I+A +P +P  +F QQ+NAP H  ++DPD+VAA       I L+NQPPNSPD NILDLGFFNSIQSLQDRTT  TV+EL+ EV R   AQ    LGR
Sbjct:   25 IHKQTPKTGLSWALRWVRPSAGDAHKFHHFFDFLHLDEKWFYICKQGQRYYFYEGEHLPIRKVQHKSHVIKVMFLAAVARPRYDSSRSRQFDGKIGIYPFTVQRAAQRNGRNMAAGTMVTHSVEVNRTLYK-KLNNNVFPDIRAKFPSSP-IIFAQQENAPGHRAMEDPDVVAAAGQGAGRIELVNQPPNSPDCNILDLGFFNSIQSLQDRTTPTTVEELVAEVERALWAQKPETLGR 260          
BLAST of mRNA_A-nodosum_M_contig1.118.1 vs. uniprot
Match: UPI000B8F2756 (uncharacterized protein LOC110913170 n=1 Tax=Helianthus annuus TaxID=4232 RepID=UPI000B8F2756)

HSP 1 Score: 251 bits (642), Expect = 7.140e-77
Identity = 141/331 (42.60%), Postives = 204/331 (61.63%), Query Frame = 1
Query:    1 KRIDIDKYKEKLQEVPLKNRTTQRNVAKQLGLSQQTLRNNLKHLGMRSASRFLKPDLSEEGKKKRVDWALCWVRDGHGGARAFDAMDNVVMVDEKCFFFLKNGQRYYLCEGEDVPVEKVQHKSHIKKLMFLAVVGRPRRDTVNNRNFDGKIGIFPFTRRAPAQRNSRNRAAGTMVTH-MVEVTKAVYKEKMLVEVFPAIKAAWP-GAPGDVFVQQDNAPSHNIVDDPDIVAAGTADGWNIRLINQPPNSPDTNILDLGFFNSIQSLQDRTTLNTVDELIKEVGRVFAAQDVAVLGRVWTTYQAVLEQIMLAKGDNTFKLPHLHKQMAARRG 987
            KRI I+   +++ ++ L+ RT  R++AK L +S+ T+   +K   +R  +  +KP+L+EE KK+R+++ L  +         +D M NVV +DEK F+  K  + YYL  GED P+ K + K  I K+MFLA V RPR DT+ N  F GKIGIFPFT+  PA+R+S+NR AGTM T  ++ VTK V +  ++ +V PAI+  WP G  G +F+QQDNA  H  +DD   V   +  G++IRL  QPPNSPD N+LDLGFF +IQSLQ++  L ++DEL+  V   F       L  V+ T Q  +++IM   G N ++ PH+ K    R+G
Sbjct:   82 KRIQINF--DQVAQIALRRRTNIRSIAKALNVSKSTVHRRIKEGELRPHTNAIKPNLTEENKKERLEFCLSMITPSLSNPSFYD-MFNVVHIDEKWFYMSKPSKSYYLVPGEDEPLRKCKSKKFITKVMFLAAVARPRFDTLGNEIFSGKIGIFPFTKLEPAKRSSKNRVAGTMETKPILSVTKEVTRSWLIDKVLPAIRDKWPQGHTGPIFIQQDNAKPHISIDDEQFVQEASRGGFDIRLRFQPPNSPDLNVLDLGFFRAIQSLQEQEVLGSIDELVHAVQTSFHKMSSRELNNVFLTLQTCMKEIMKVHGSNNYQTPHISKGRLERQG 409          
BLAST of mRNA_A-nodosum_M_contig1.118.1 vs. uniprot
Match: A0A6A5AA16_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AA16_9STRA)

HSP 1 Score: 251 bits (642), Expect = 1.660e-76
Identity = 139/330 (42.12%), Postives = 200/330 (60.61%), Query Frame = 1
Query:   46 PLKNRTTQRNVAKQLGLSQQTLRNNLKHLGMRSASRFLKPDLSEEGKKKRVDWALCWVRDGHGGARAFDAMDNVVMVDEKCFFFLKNGQRYYLCEGEDVPVEKVQHKSHIKKLMFLAVVGRPRRDTVNNRNFDGKIGIFPFTRRAPAQRNSRNRAAGTMVTHMVEVTKAVYKEKMLVEVFPAIKAAWPGAPG-DVFVQQDNAPSHNIVDDPDIVAAGTADGWNIRLINQPPNSPDTNILDLGFFNSIQSLQDRTTLNTVDELIKEVGRVFAAQDVAVLGRVWTTYQAVLEQIMLAKGDNTFKLPHLHKQMAARRGASIVRALPCSEEAWL 1032
            P   R   R +AK  G+ +  L   +K   +   +  L+P L+ + +  R ++A  ++RDG+ G R +  M + V +DEK F+  +  +R+YL   E  P  K Q K HI K+MFL  V RPR D+ + + +DGK+G++PF     A+R S+NR  GT VT  + VTK VY+  ++ +V PAI+A WPG  G  ++VQQDNA  H  VDDP+++AAG  +GWNI+L+ QP  SPD N+LDLGFFN+IQSLQ +TT  T+D+LIK V   F      VL + + T Q V+E+ M + GDN +KLPHL K M  +   + +R   C E+  L
Sbjct:   96 PAHLRGNYRTMAKATGVPKTALWRLVKAKKLNRRTSRLRPMLTPQHRVARYNFAKSFIRDGYQGRRQWHDMLDCVHIDEKWFYITQVNRRFYLWHDEPTPQRKAQSKRHITKVMFLCAVARPRHDSAHRKMWDGKVGLWPFVETQLAKRRSKNRDRGTPVTVPMTVTKPVYRRFLVDKVIPAIQAQWPGRRGATIYVQQDNAKPHVAVDDPEVLAAGRKEGWNIQLMAQPAQSPDFNVLDLGFFNAIQSLQHQTTARTIDDLIKCVEDAFENLAWRVLDKTFMTLQKVMEEAMRSSGDNVYKLPHLKKDMQFKTRVTELRP-SCDEDVLL 424          
BLAST of mRNA_A-nodosum_M_contig1.118.1 vs. uniprot
Match: A0A6H5JGY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGY9_9PHAE)

HSP 1 Score: 244 bits (624), Expect = 1.480e-75
Identity = 129/198 (65.15%), Postives = 148/198 (74.75%), Query Frame = 1
Query:  436 NFDGKIGIFPFTRRAPAQRNSRNRAAGTMVTHMVEVTKAVYKEKMLVEVFPAIKAAWPGAPG-DVFVQQDNAPSHNIVDDPDIVAAGTADGWNIRLINQPPNSPDTNILDLGFFNSIQSLQDRTTLNTVDELIKEVGRVFAAQDVAVLGRVWTTYQAVLEQIMLAKGDNTFKLPHLHKQMAARRGASIVRALPCSEEA 1026
            NF GK+GIF FT +  AQRNSRNRAAGTM T  VEVTK V+K K++ EVFPAIKA WPG  G  +++Q DN PSH I  DPD+VAAG ADGW+IRLINQP NSPDTNILDLGFFN++QSLQDR T  TVDE I EV R F  Q  +   +VW + QA+L QI+LAKG+NTFKLPHL K  AA  G SI + LP S EA
Sbjct:   87 NFTGKLGIFQFTVQRAAQRNSRNRAAGTMETKCVEVTKEVFKRKVVDEVFPAIKARWPGGRGRTIYIQLDNKPSHRINADPDVVAAGIADGWDIRLINQPSNSPDTNILDLGFFNAVQSLQDRNTPRTVDEFITEVKRAFEEQSPSTHDKVWVSLQAIL-QIILAKGNNTFKLPHLKKDNAANSGRSIPKELPLSAEA 283          
BLAST of mRNA_A-nodosum_M_contig1.118.1 vs. uniprot
Match: A0A6A4Z1S9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z1S9_9STRA)

HSP 1 Score: 247 bits (631), Expect = 2.260e-75
Identity = 140/326 (42.94%), Postives = 190/326 (58.28%), Query Frame = 1
Query:   13 IDKYKEKLQEVPLKNRTTQRNVAKQLGLSQQTLRNNLKHLGMRSASRFLKPDLSEEGKKKRVDWALCWVRDGHGGARAFDAMDNVVMVDEKCFFFLKNGQRYYLCEGEDVPVEKVQHKSHIKKLMFLAVVGRPRRDTVNNRNFDGKIGIFPFTRRAPAQRNSRNRAAGTMVTHMVEVTKAVYKEKMLVEVFPAIKAAWPGAPGD-VFVQQDNAPSHNIVDDPDIVAAGTADGWNIRLINQPPNSPDTNILDLGFFNSIQSLQDRTTLNTVDELIKEVGRVFAAQDVAVLGRVWTTYQAVLEQIMLAKGDNTFKLPHLHKQMAARRG 987
            +D+ +  ++ VP   R T  ++A   G+   TL   L+   ++  +  LKP ++++ K  RV++   +VR    G   +D M N V +DEK F+     +RYYL   E VPV K   K HI K+MFL  V RPR D      +DGKIG++PF    PA+R S+NR  GT VT  V VTK VY++ +L  V P IKA WPG   D +++QQDNA  H  VDDP +  AG ADGW+I L+ QPP SPD N+LDLGFFNSIQ+LQ R  +  +D+L+  V R F   +  VL + + T Q V+ + +   GDN FKLPH  K    R G
Sbjct:   85 LDEVESAVKSVPPHLRKTFASLAASSGIPPTTLWRVLQTKKLQRRTSRLKPMVTDKHKADRVEFVRSFVRPTSDGQMRWDDMHNRVHIDEKWFYLTLVNRRYYLWHDEAVPVRKCTSKRHIIKVMFLTAVARPRFDYTTRTMWDGKIGMWPFVSVVPARRKSKNRDRGTPVTTPVTVTKPVYRDYLLTHVIPRIKAVWPGRRSDPIYIQQDNARPHVEVDDPAVTMAGCADGWSIHLVAQPPMSPDFNVLDLGFFNSIQALQHREVVTGIDDLVAAVHRAFGDLEWRVLDKTFVTLQRVMGEALKMGGDNAFKLPHSQKDKTERLG 410          
BLAST of mRNA_A-nodosum_M_contig1.118.1 vs. uniprot
Match: UPI000CD9BE6A (uncharacterized protein LOC111905831 n=2 Tax=Lactuca sativa TaxID=4236 RepID=UPI000CD9BE6A)

HSP 1 Score: 245 bits (626), Expect = 9.570e-75
Identity = 136/325 (41.85%), Postives = 203/325 (62.46%), Query Frame = 1
Query:    1 KRIDIDKYKEKLQEVPLKNRTTQRNVAKQLGLSQQTLRNNLKHLGMRSASRFLKPDLSEEGKKKRVDWALCWV-RDGHGGARAFDAMDNVVMVDEKCFFFLKNGQRYYLCEGEDVPVEKVQHKSHIKKLMFLAVVGRPRRDTVNNRNFDGKIGIFPFTRRAPAQRNSRNRAAGTMVTH-MVEVTKAVYKEKMLVEVFPAIKAAWP-GAPGDVFVQQDNAPSHNIVDDPDIVAAGTADGWNIRLINQPPNSPDTNILDLGFFNSIQSLQDRTTLNTVDELIKEVGRVFAAQDVAVLGRVWTTYQAVLEQIMLAKGDNTFKLPHLHK 966
            KR+ +D  +  + ++PL+ RTT +++AK LG+ + TL   +K   +R  +  +KPDL++  K KR+++ L  + R        F  M NV+ +DEK F+  ++ +RYYL  GED P+   + K  I K+MFLA V R R D + N  F GKIGIFP T + PA+R+S+NR AGT+ T  ++ VTK + +  ++ +V PAIKA WP    G +F+QQDNA  H  V+D + + A + DG++IRL  QPPNSPD N+LDLGFF +IQSLQ++  L+TVDEL+  V   F       L  V+ T Q  +++I+  KG N +++ H+ K
Sbjct:   83 KRVQLDLNQ--VSQIPLRRRTTIQSIAKSLGIVKSTLHRRIKEGDLRPRTNAIKPDLTDANKTKRLEFCLSMITRSLPESNTTFHDMFNVIHIDEKWFYISRSSKRYYLVPGEDEPLRTCKSKKFITKVMFLAAVARLRFDALGNEIFFGKIGIFPLTTKEPAKRSSKNRVAGTLETKPILSVTKEITRSWLIEKVLPAIKAKWPPNHTGPIFIQQDNAKPHIDVNDNEFLEASSQDGFDIRLCFQPPNSPDLNMLDLGFFRAIQSLQEQEVLHTVDELVTAVQTSFDKMQSHELNNVFLTLQTCMKEIIKVKGGNNYRISHIGK 405          
BLAST of mRNA_A-nodosum_M_contig1.118.1 vs. uniprot
Match: UPI000CD9DCB3 (uncharacterized protein LOC111916103 n=1 Tax=Lactuca sativa TaxID=4236 RepID=UPI000CD9DCB3)

HSP 1 Score: 244 bits (623), Expect = 5.510e-74
Identity = 137/333 (41.14%), Postives = 202/333 (60.66%), Query Frame = 1
Query:    1 KRIDIDKYKEKLQEVPLKNRTTQRNVAKQLGLSQQTLRNNLKHLGMRSASRFLKPDLSEEGKKKRVDWALCWVRDGH--GGARAFDAMDNVVMVDEKCFFFLKNGQRYYLCEGEDVPVEKVQHKSHIKKLMFLAVVGRPRRDTVNNRNFDGKIGIFPFTRRAPAQRNSRNRAAGTMVTH-MVEVTKAVYKEKMLVEVFPAIKAAWP-GAPGDVFVQQDNAPSHNIVDDPDIVAAGTADGWNIRLINQPPNSPDTNILDLGFFNSIQSLQDRTTLNTVDELIKEVGRVFAAQDVAVLGRVWTTYQAVLEQIMLAKGDNTFKLPHLHKQMAARRG 987
            KR+ I+  +  + E+PL++R+  R++AK L +S+ TL   +K   +R  +  +KP L+ E ++ R+++ L  +           F  M NVV +DEK F+  K  +RYYL  G+D P+   + K  I K+MFLA V RPR D+  N  F GKIGI+PFT   PA+R+S+NR AGTM T  ++ V K V +  ++ +V P I+A WP G  G +F+QQDNA  H  VDD + + A + DG++IRL  QPPNSPD N+LDLGFF +IQSLQ++  L+T DEL+  V   F       L  V+ T Q  +++I+  +G N + +PH+ K    R+G
Sbjct:   83 KRVQINLNQ--VSEIPLRHRSNIRSLAKSLNVSKSTLHRRIKEGVLRPHTNVIKPTLTHENRRARLEYCLSKITLSSLFSPIPTFHDMFNVVHIDEKWFYMSKPSKRYYLVPGDDEPLRTCKSKKFITKIMFLAAVARPRYDSSGNEVFSGKIGIYPFTTLEPAKRSSKNRVAGTMETKPILSVNKEVTRSWLIEKVLPDIRAKWPRGHTGPIFIQQDNAKPHIDVDDSEFLEAASRDGFDIRLCFQPPNSPDLNVLDLGFFRAIQSLQEQEALSTTDELVNAVQTSFERMQSQQLNNVFLTLQTCMKEIIKVQGGNNYHIPHIGKSRLDRQG 413          
BLAST of mRNA_A-nodosum_M_contig1.118.1 vs. uniprot
Match: UPI000CD873B3 (uncharacterized protein LOC111883545 n=1 Tax=Lactuca sativa TaxID=4236 RepID=UPI000CD873B3)

HSP 1 Score: 243 bits (621), Expect = 1.070e-73
Identity = 139/343 (40.52%), Postives = 206/343 (60.06%), Query Frame = 1
Query:    1 KRIDIDKYKEKLQEVPLKNRTTQRNVAKQLGLSQQTLRNNLKHLGMRSASRFLKPDLSEEGKKKRVDWALCWV-RDGHGGARAFDAMDNVVMVDEKCFFFLKNGQRYYLCEGEDVPVEKVQHKSHIKKLMFLAVVGRPRRDTVNNRNFDGKIGIFPFTRRAPAQRNSRNRAAGTMVTH-MVEVTKAVYKEKMLVEVFPAIKAAWPGAP-GDVFVQQDNAPSHNIVDDPDIVAAGTADGWNIRLINQPPNSPDTNILDLGFFNSIQSLQDRTTLNTVDELIKEVGRVFAAQDVAVLGRVWTTYQAVLEQIMLAKGDNTFKLPHLHKQMAARRGASIVRALPCSE 1020
            KR+ +D + + L ++PL+ R+  R++A  L +S+ T+   +K   +R  +  +KP L+ E K+ R+++ L  + R        F  M NV+ +DEK F+  K  +RYYL  GED P+   Q K  I K+MFLA V RPR D   N  F GKIGI+PFTR  PA+R+S+NR AGT+ T  ++ VTK V +  ++ +V P I+A WP +  G +F+QQDNA  H  V+D + + A + DG++IRL  QP NSPD N+LDLGFF +IQSLQ++  L T+DEL+  V   F       L  V+ T Q  + +I+  +G N +++PH+ K    R G   +R + C E
Sbjct:   83 KRVQVD-FNQVL-DIPLRRRSNIRSLANLLNVSKSTMHRRIKEGALRPHTNAIKPTLTHENKRARLEFCLSKISRSLSSNIPTFHDMFNVIHIDEKWFYMSKPSRRYYLVPGEDEPLRTCQSKKFITKVMFLAAVARPRFDASGNEVFSGKIGIYPFTRLEPAKRSSKNRVAGTLETKPILSVTKEVTRSWLIEKVLPDIRAKWPRSHVGPIFIQQDNAKPHIDVNDNEFLEAASQDGFDIRLNFQPSNSPDLNVLDLGFFRAIQSLQEQEALGTIDELVHAVQTAFEKMQSQQLNNVFLTLQTCMREIIKVQGGNNYQIPHIGKNRLEREGNLPLR-IGCDE 422          
BLAST of mRNA_A-nodosum_M_contig1.118.1 vs. uniprot
Match: A0A485KDC6_9STRA (Aste57867_3131 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KDC6_9STRA)

HSP 1 Score: 243 bits (619), Expect = 3.260e-73
Identity = 140/326 (42.94%), Postives = 189/326 (57.98%), Query Frame = 1
Query:   13 IDKYKEKLQEVPLKNRTTQRNVAKQLGLSQQTLRNNLKHLGMRSASRFLKPDLSEEGKKKRVDWALCWVRDGHGGARAFDAMDNVVMVDEKCFFFLKNGQRYYLCEGEDVPVEKVQHKSHIKKLMFLAVVGRPRRDTVNNRNFDGKIGIFPFTRRAPAQRNSRNRAAGTMVTHMVEVTKAVYKEKMLVEVFPAIKAAWPGAPGD-VFVQQDNAPSHNIVDDPDIVAAGTADGWNIRLINQPPNSPDTNILDLGFFNSIQSLQDRTTLNTVDELIKEVGRVFAAQDVAVLGRVWTTYQAVLEQIMLAKGDNTFKLPHLHKQMAARRG 987
            +D  +  ++ VP   R T   +A   G+   TL   L+   ++  +  LKP ++++ K  RV++   +VR    G   +D M + V +DEK F+     +RYYL   EDVPV K   K HI K+MFL  V RPR D    R +DGKIG++PF    PAQR S+NR  GT VT  V VTK VY+E +L  V P IK  WPG     +++QQDNA  H  VDD  +  AG +DGW+I+L+ QP  SPD N+LDLGFFNSIQ+LQ R  +  +D+L+  V R F   D +VL + + T Q V+ + +   GDN FKLPH  K   AR G
Sbjct:   85 VDDVEAAVKSVPPHLRKTFVMLAASSGIPSTTLWRVLQTKKLQRRTSRLKPMVTDKHKADRVEFVQAFVRPSTNGQMRWDDMLDRVHIDEKWFYLTLVNRRYYLWHDEDVPVRKCSSKRHIIKVMFLTAVARPRYDYTQRRMWDGKIGMWPFVSVVPAQRKSKNRERGTPVTTPVTVTKKVYREYLLEHVIPTIKKVWPGRRSHPIYIQQDNARPHVEVDDAAVTLAGHSDGWSIQLVAQPAMSPDFNVLDLGFFNSIQALQHREVVTGIDDLVAAVHRAFDDLDWSVLDKTFMTLQRVMGEALKMGGDNAFKLPHSKKDKTARLG 410          
BLAST of mRNA_A-nodosum_M_contig1.118.1 vs. uniprot
Match: W2NW41_PHYPR (HTH_Tnp_Tc3_2 domain-containing protein n=4 Tax=Phytophthora parasitica TaxID=4792 RepID=W2NW41_PHYPR)

HSP 1 Score: 242 bits (618), Expect = 4.600e-73
Identity = 143/346 (41.33%), Postives = 199/346 (57.51%), Query Frame = 1
Query:    1 KRIDIDKYKEKLQEVPLKNRTTQRNVAKQLGLSQQTLRNNLKHLGMRSASRFLKPDLSEEGKKKRVDWALCWVRDGHGGARAFDAMDNVVMVDEKCFFFLKNGQRYYLCEGEDVPVEKVQHKSHIKKLMFLAVVGRPRRDTVNNRNFDGKIGIFPFTRRAPAQRNSRNRAAGTMVTHMVE-VTKAVYKEKMLVEVFPAIKAAWP--GAPGDVFVQQDNAPSHNIVDDPDIVAAGTADGWNIRLINQPPNSPDTNILDLGFFNSIQSLQDRTTLNTVDELIKEVGRVFAAQDVAVLGRVWTTYQAVLEQIMLAKGDNTFKLPHLHKQMAARRGASIVRALPCSEEAW 1029
            K ID D+ + +++++PL  R T +++A  LG+S   +R  LK    R  S  +KP L+EE +  RV +AL       GG   F  M +VV +DEK F    + + YYL   E+ PV + Q K  I K MF+A V RPR D    + FDGKIGI+ F     A+R S+NR  GT+V   VE V +  YK   + ++ PAIKA WP  G    +++QQDNA  H  VDDPDI+AAG + GW+IR+  QPPNSPD N+LDLG+F SIQSLQ +T    V+ L+  V   F+A     L +++ T Q  +E I+ A G N +K PH  K  A ++   +  +  CS E +
Sbjct:   77 KAIDTDELRLQIRKIPLSRRMTIKSLAAALGVSTTVIRRLLKEGAFRRHSSNVKPALTEENRLARVQFALSHTTRKRGGEMVFADMFDVVHIDEKWFNEDTDRKCYYLDADEEEPVRQRQSKRFISKTMFIAAVARPRYDAHRKQAFDGKIGIWAFAEEYEAKRTSKNRPKGTIVLRNVESVDREAYKATHIGDIIPAIKAKWPRSGKKRTIYIQQDNAKPHVSVDDPDIMAAGRSGGWDIRMRCQPPNSPDLNVLDLGYFRSIQSLQYQTECRGVEALLDAVNSAFSAMKADTLNKIFMTLQTCMECIIRANGGNNYKTPHRGKD-ALKKAGQLPVSFACSAEVY 421          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1.118.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KWV2_9PHAE6.630e-7755.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI000B8F27567.140e-7742.60uncharacterized protein LOC110913170 n=1 Tax=Helia... [more]
A0A6A5AA16_9STRA1.660e-7642.12Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
A0A6H5JGY9_9PHAE1.480e-7565.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6A4Z1S9_9STRA2.260e-7542.94Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
UPI000CD9BE6A9.570e-7541.85uncharacterized protein LOC111905831 n=2 Tax=Lactu... [more]
UPI000CD9DCB35.510e-7441.14uncharacterized protein LOC111916103 n=1 Tax=Lactu... [more]
UPI000CD873B31.070e-7340.52uncharacterized protein LOC111883545 n=1 Tax=Lactu... [more]
A0A485KDC6_9STRA3.260e-7342.94Aste57867_3131 protein n=1 Tax=Aphanomyces stellat... [more]
W2NW41_PHYPR4.600e-7341.33HTH_Tnp_Tc3_2 domain-containing protein n=4 Tax=Ph... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1contigA-nodosum_M_contig1:1793168..1794214 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog157072.XP_008866696.1
Model size1047
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons1
Evalue5.53e-72
EggNOG OGs2CMKC@1|root,2QQNW@2759|Eukaryota
Cds size1047
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866343.7976115-CDS-A-nodosum_M_contig1:1793167..17942141680866343.7976115-CDS-A-nodosum_M_contig1:1793167..1794214Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1 1793168..1794214 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1.118.1prot_A-nodosum_M_contig1.118.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig1 1793168..1794214 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig1.118.1

>prot_A-nodosum_M_contig1.118.1 ID=prot_A-nodosum_M_contig1.118.1|Name=mRNA_A-nodosum_M_contig1.118.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=349bp
KRIDIDKYKEKLQEVPLKNRTTQRNVAKQLGLSQQTLRNNLKHLGMRSAS
RFLKPDLSEEGKKKRVDWALCWVRDGHGGARAFDAMDNVVMVDEKCFFFL
KNGQRYYLCEGEDVPVEKVQHKSHIKKLMFLAVVGRPRRDTVNNRNFDGK
IGIFPFTRRAPAQRNSRNRAAGTMVTHMVEVTKAVYKEKMLVEVFPAIKA
AWPGAPGDVFVQQDNAPSHNIVDDPDIVAAGTADGWNIRLINQPPNSPDT
NILDLGFFNSIQSLQDRTTLNTVDELIKEVGRVFAAQDVAVLGRVWTTYQ
AVLEQIMLAKGDNTFKLPHLHKQMAARRGASIVRALPCSEEAWLKAHE*
back to top

mRNA from alignment at A-nodosum_M_contig1:1793168..1794214+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig1.118.1 ID=mRNA_A-nodosum_M_contig1.118.1|Name=mRNA_A-nodosum_M_contig1.118.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=1047bp|location=Sequence derived from alignment at A-nodosum_M_contig1:1793168..1794214+ (Ascophyllum nodosum dioecious)
AAACGCATCGACATCGACAAATACAAGGAAAAACTACAAGAGGTACCGCT CAAAAACCGCACCACCCAGAGGAATGTTGCGAAACAACTGGGCCTCTCCC AACAAACCCTTCGCAACAACCTCAAGCACCTGGGGATGCGTTCGGCGTCC CGATTCCTTAAGCCGGATCTCTCGGAAGAGGGCAAGAAGAAGAGGGTGGA TTGGGCCCTGTGTTGGGTGCGTGACGGCCATGGTGGTGCTCGCGCCTTCG ACGCGATGGACAACGTGGTCATGGTGGATGAGAAATGTTTTTTTTTTTTA AAGAATGGTCAGCGGTACTACCTCTGTGAAGGCGAAGATGTGCCGGTCGA GAAGGTGCAACACAAGTCGCACATCAAAAAGCTGATGTTCCTGGCGGTCG TCGGGCGACCGCGCAGGGACACGGTGAACAACAGGAACTTCGACGGGAAG ATCGGCATCTTCCCGTTCACCAGGAGGGCGCCGGCCCAACGCAACAGCAG GAACAGGGCTGCGGGGACGATGGTGACACACATGGTGGAGGTGACGAAGG CGGTCTACAAGGAGAAGATGCTGGTCGAAGTTTTCCCTGCCATCAAGGCT GCGTGGCCGGGTGCGCCGGGGGACGTCTTCGTCCAGCAGGACAATGCTCC GTCACACAACATCGTCGACGACCCGGACATTGTGGCGGCGGGTACTGCTG ACGGATGGAACATTCGGCTCATCAACCAGCCGCCCAACAGCCCCGACACG AACATCCTGGACTTGGGGTTTTTCAACTCCATCCAGTCCCTCCAGGATCG GACGACGCTGAACACGGTGGACGAGCTTATCAAGGAGGTGGGCAGGGTGT TCGCCGCGCAGGACGTGGCGGTCCTTGGCAGGGTCTGGACGACCTACCAG GCCGTCCTCGAGCAGATCATGCTCGCGAAGGGCGACAACACCTTCAAGCT GCCCCACCTGCACAAACAGATGGCGGCCCGTCGTGGTGCGTCAATTGTGC GGGCCTTGCCATGCAGCGAGGAGGCGTGGCTTAAGGCTCACGAGTGA
back to top

Coding sequence (CDS) from alignment at A-nodosum_M_contig1:1793168..1794214+

>mRNA_A-nodosum_M_contig1.118.1 ID=mRNA_A-nodosum_M_contig1.118.1|Name=mRNA_A-nodosum_M_contig1.118.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1047bp|location=Sequence derived from alignment at A-nodosum_M_contig1:1793168..1794214+ (Ascophyllum nodosum dioecious)
AAACGCATCGACATCGACAAATACAAGGAAAAACTACAAGAGGTACCGCT
CAAAAACCGCACCACCCAGAGGAATGTTGCGAAACAACTGGGCCTCTCCC
AACAAACCCTTCGCAACAACCTCAAGCACCTGGGGATGCGTTCGGCGTCC
CGATTCCTTAAGCCGGATCTCTCGGAAGAGGGCAAGAAGAAGAGGGTGGA
TTGGGCCCTGTGTTGGGTGCGTGACGGCCATGGTGGTGCTCGCGCCTTCG
ACGCGATGGACAACGTGGTCATGGTGGATGAGAAATGTTTTTTTTTTTTA
AAGAATGGTCAGCGGTACTACCTCTGTGAAGGCGAAGATGTGCCGGTCGA
GAAGGTGCAACACAAGTCGCACATCAAAAAGCTGATGTTCCTGGCGGTCG
TCGGGCGACCGCGCAGGGACACGGTGAACAACAGGAACTTCGACGGGAAG
ATCGGCATCTTCCCGTTCACCAGGAGGGCGCCGGCCCAACGCAACAGCAG
GAACAGGGCTGCGGGGACGATGGTGACACACATGGTGGAGGTGACGAAGG
CGGTCTACAAGGAGAAGATGCTGGTCGAAGTTTTCCCTGCCATCAAGGCT
GCGTGGCCGGGTGCGCCGGGGGACGTCTTCGTCCAGCAGGACAATGCTCC
GTCACACAACATCGTCGACGACCCGGACATTGTGGCGGCGGGTACTGCTG
ACGGATGGAACATTCGGCTCATCAACCAGCCGCCCAACAGCCCCGACACG
AACATCCTGGACTTGGGGTTTTTCAACTCCATCCAGTCCCTCCAGGATCG
GACGACGCTGAACACGGTGGACGAGCTTATCAAGGAGGTGGGCAGGGTGT
TCGCCGCGCAGGACGTGGCGGTCCTTGGCAGGGTCTGGACGACCTACCAG
GCCGTCCTCGAGCAGATCATGCTCGCGAAGGGCGACAACACCTTCAAGCT
GCCCCACCTGCACAAACAGATGGCGGCCCGTCGTGGTGCGTCAATTGTGC
GGGCCTTGCCATGCAGCGAGGAGGCGTGGCTTAAGGCTCACGAGTGA
back to top